sample tissue condition fpkm SRR1035239 liver transgenic mCherry control 56.6942 SRR1562530 liver normal 26.9866 ERR023146 head kidney normal 24.1134 SRR1291414 5 dpi normal 20.9462 SRR630463 5 dpf normal 17.9952 SRR1562529 intestine and pancreas normal 16.6485 SRR942764 embryo myd88-/- 16.1082 SRR1342216 embryo norml 13.1138 SRR630464 5 dpf injected epidermidis 12.9464 SRR1035237 liver transgenic UHRF1 12.1071 SRR1342218 embryo marco morpholino 10.895999999999999 SRR942769 embryo myd88+/+ 10.0466 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 10.0436 SRR1039571 gastrointestinal diet 0.1 NPM 9.84055 SRR1167752 embryo normal 9.74625 SRR1291417 5 dpi injected marinum 8.22059 SRR658545 6 somite Gata6 morphant 8.1948 SRR1005529 embryo control morpholino 7.90375 SRR801554 embryo control morpholino 7.88886 SRR1648856 brain normal 7.738639999999999 SRR658541 6 somite normal 7.7295300000000005 SRR1167753 embryo bacterial infection 7.43318 SRR749514 24 hpf normal 6.7208 SRR1188148 embryo Control PBS 0.5 hpi 6.42448 SRR1562532 spleen normal 6.39682 SRR1039573 gastrointestinal diet 0.75 NPM 6.3101199999999995 SRR1647679 head kidney normal 6.26025 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 6.06237 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 5.7639 SRR1167762 embryo ptpn6 morpholino 5.30203 SRR1562531 muscle normal 5.283930000000001 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 5.24901 SRR535978 larvae normal 5.2252 SRR527844 24hpf normal 5.2201699999999995 SRR1708346 embryo SIBPS 5.18219 SRR527833 5 dpf normal 4.95177 SRR1167756 embryo mpeg1 morpholino 4.797619999999999 SRR1004786 larvae control morpholino 4.66408 SRR1167757 embryo mpeg1 morpholino and bacterial infection 4.6047199999999995 SRR1523214 embryo glut12 morpholino 4.496980000000001 SRR1647682 spleen normal 4.43966 SRR1342217 embryo infection with Mycobacterium marinum 4.085319999999999 SRR516131 skin male and 5 month 4.03715 SRR535986 larvae nhsl1b mut 4.009580000000001 SRR516122 skin male and 3.5 year 3.9203 SRR1708344 embryo MUTPS 3.3747300000000005 SRR1648854 brain normal 3.33675 SRR1647681 head kidney SVCV treatment 3.33215 SRR658543 6 somite Gata5 morphan 3.3022400000000003 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.2969999999999997 SRR516130 skin male and 5 month 3.28876 SRR516127 skin male and 5 month 3.2177700000000002 SRR1188156 embryo Control PBS 4 hpi 3.2158900000000004 SRR516133 skin male and 5 month 3.17632 SRR658535 bud Gata5 morphant 2.9247799999999997 SRR516134 skin male and 5 month 2.8207400000000002 SRR516123 skin male and 3.5 year 2.73886 SRR610742 3 dpf express NICD 2.65187 SRR1523211 embryo control morpholino 2.62456 SRR1004787 larvae impdh1a morpholino 2.5839999999999996 SRR1562528 eye normal 2.56813 SRR527832 16-36 hpf normal 2.56383 SRR1534350 larvae 5 ug/l BDE47 treatment 2.55865 SRR1188160 embryo Insulin 4 hpi 2.4948599999999996 SRR658547 6 somite Gata5/6 morphant 2.4319900000000003 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2.4165099999999997 SRR749515 24 hpf eif3ha morphant 2.35898 SRR1534349 larvae DMSO vehicle 2.35741 SRR1004788 larvae impdh1b morpholino 2.34754 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 2.32828 SRR516126 skin male and 5 month 2.3197400000000004 SRR1004785 larvae normal 2.27026 SRR658533 bud normal 2.19551 SRR1035984 13 hpf normal 2.19099 SRR535850 larvae hoxb1b mut 2.17398 SRR1028004 head normal 2.16644 SRR1035978 13 hpf rx3-/- 2.10929 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.075 SRR801555 embryo RPS19 morpholino 2.05903 SRR658537 bud Gata6 morphant 2.03899 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.99806 SRR527836 24hpf normal 1.95861 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 1.8588099999999999 SRR1205154 5dpf transgenic sqET20 1.8069 SRR1299128 caudal fin Three days time after treatment 1.8061 SRR1647680 head kidney SVCV treatment 1.79076 SRR535852 larvae hoxb1b mut 1.74239 SRR516128 skin male and 5 month 1.71395 SRR1205160 5dpf transgenic sqET20 and GFP+ 1.59162 SRR1299129 caudal fin Seven days time after treatment 1.55067 SRR1104058 heart normal 1.4994299999999998 SRR038624 embryo traf6 morpholino and bacterial infection 1.47406 SRR776508 embryo miR-146 knockdown 1.44391 SRR535890 larvae normal 1.38815 SRR941749 anterior pectoral fin normal 1.36261 SRR038626 embryo control morpholino and bacterial infection 1.29253 SRR1708343 embryo MUTAS 1.2666600000000001 SRR516125 skin male and 3.5 year 1.23441 SRR519742 4 dpf VD3 treatment 1.17626 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.1406399999999999 SRR1004789 larvae impdh2 morpholino 1.13011 SRR519717 2 dpf FETOH treatment 1.1294799999999998 SRR535847 larvae normal 1.1080299999999998 SRR941753 posterior pectoral fin normal 1.03421 SRR797911 embryo prdm1-/- 1.01777 SRR372802 5 dpf normal 0.9786889999999999 SRR1188152 embryo Insulin 0.5 hpi 0.950974 SRR065196 3 dpf normal 0.926467 SRR535848 larvae hoxb1b mut 0.907961 SRR726541 5 dpf infection with Mycobacterium marinum 0.907797 SRR065197 3 dpf U1C knockout 0.8889729999999999 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.863643 SRR038627 embryo control morpholino 0.8602850000000001 SRR535943 larvae vangl mut 0.8318780000000001 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.8242 SRR535851 larvae normal 0.819643 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.814695 SRR1708345 embryo SIBAS 0.791567 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.783654 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.767173 SRR700537 heart Gata4 morpholino 0.7613770000000001 SRR1562533 testis normal 0.709847 SRR797908 embryo normal 0.682797 SRR1104059 heart kctd10 mut 0.676108 SRR1299124 caudal fin Zero day time after treatment 0.672618 SRR1299125 caudal fin Half day time after treatment 0.657602 SRR797914 embryo pbx2/4-MO 0.657381 SRR372798 28 hpf normal 0.643604 SRR592702 pineal gland normal 0.600929 SRR519722 4 dpf FETOH treatment 0.598984 SRR519737 2 dpf VD3 treatment 0.556208 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.543266 SRR372800 2 dpf normal 0.5422899999999999 SRR1299126 caudal fin One day time after treatment 0.54157 SRR516129 skin male and 5 month 0.525409 SRR519747 6 dpf VD3 treatment 0.49568199999999996 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.482728 SRR519727 6 dpf FETOH treatment 0.47184899999999996 SRR535913 larvae krox mut 0.465546 SRR776507 embryo normal 0.46243100000000004 SRR514028 retina control morpholino 0.44995100000000005 SRR891495 heart normal 0.434439 SRR1299127 caudal fin Two days time after treatment 0.417706 SRR1648855 brain normal 0.409317 SRR633516 larvae normal 0.406095 SRR1028002 head normal 0.401049 SRR516135 skin male and 5 month 0.393977 SRR633550 larvae exposed to hypoxia stress 0.391304 SRR658539 bud Gata5/6 morphant 0.375374 SRR1647684 spleen SVCV treatment 0.361548 SRR519732 7 dpf FETOH treatment 0.356609 SRR514030 retina id2a morpholino 0.349304 SRR1647683 spleen SVCV treatment 0.330469 ERR594417 retina normal 0.329177 SRR527840 24hpf normal 0.324925 SRR1028003 head normal 0.321216 SRR519752 7 dpf VD3 treatment 0.314938 ERR023144 brain normal 0.31255900000000003 SRR372796 bud normal 0.296483 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.292248 SRR592699 pineal gland normal 0.29096500000000003 SRR776509 embryo Salmonella infected 0.28667600000000004 SRR592703 pineal gland normal 0.262815 SRR038625 embryo traf6 morpholino 0.25101799999999996 SRR1565807 brain normal 0.248784 SRR516121 skin male and 3.5 year 0.24230100000000002 SRR957180 heart 7 days after heart tip amputation 0.202931 ERR594418 retina transgenic flk1 and develop tumors 0.20172 SRR1048061 pineal gland dark 0.190711 SRR594771 endothelium normal 0.18342 SRR592700 pineal gland normal 0.164103 SRR1569495 embryo normal 0.15595799999999999 SRR1021213 sphere stage normal 0.148151 SRR527835 tail normal 0.145607 ERR594416 retina transgenic flk1 0.138207 SRR1565815 brain normal 0.131268 SRR592698 pineal gland normal 0.128401 SRR1565805 brain normal 0.12474400000000001 SRR700534 heart control morpholino 0.12380899999999999 SRR1565813 brain normal 0.11415 SRR1565819 brain normal 0.09485310000000001 SRR1049814 256 cell normal 0.0793286 SRR1565811 brain normal 0.0484027 SRR891511 brain normal 0.04214880000000001 SRR594769 blood normal 0.027486299999999998 SRR1565809 brain normal 0.0249877 SRR1021215 sphere stage Mzeomesa 0.024603299999999998 SRR1621206 embryo normal 0.0125222 SRR748488 sperm normal 0.00789048 SRR610741 3 dpf express Ras 0.00486036