sample tissue condition fpkm SRR797914 embryo pbx2/4-MO 21.388 SRR1035981 13 hpf rx3+/+ or rx3+/- 19.117 SRR1035978 13 hpf rx3-/- 18.6117 SRR797908 embryo normal 18.5094 SRR797911 embryo prdm1-/- 18.4715 SRR797917 embryo pbx2/4-MO and prdm1-/- 18.4612 SRR658541 6 somite normal 13.8499 SRR1565805 brain normal 12.6182 SRR1565807 brain normal 12.1495 SRR1708345 embryo SIBAS 12.1153 SRR1565815 brain normal 11.9603 SRR658545 6 somite Gata6 morphant 11.8098 SRR658543 6 somite Gata5 morphan 11.4425 SRR1565813 brain normal 11.2174 SRR1565819 brain normal 11.1856 SRR1565817 brain normal 11.1723 SRR1035984 13 hpf normal 11.1343 ERR023144 brain normal 11.0898 SRR1562529 intestine and pancreas normal 10.796 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 10.5691 SRR1565811 brain normal 10.0106 SRR527840 24hpf normal 9.88847 SRR1565809 brain normal 9.671 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 9.5508 SRR658547 6 somite Gata5/6 morphant 9.46344 SRR1205160 5dpf transgenic sqET20 and GFP+ 9.437610000000001 SRR1708346 embryo SIBPS 9.3761 SRR1708343 embryo MUTAS 8.98183 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 8.89096 SRR1562530 liver normal 8.663680000000001 SRR519737 2 dpf VD3 treatment 8.58007 SRR527836 24hpf normal 8.532639999999999 SRR749515 24 hpf eif3ha morphant 8.320269999999999 SRR610741 3 dpf express Ras 8.27459 SRR519717 2 dpf FETOH treatment 7.816339999999999 SRR594771 endothelium normal 7.7796 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 7.7222800000000005 SRR535926 larvae normal 7.68395 SRR535943 larvae vangl mut 7.57895 SRR535913 larvae krox mut 7.395510000000001 SRR1569495 embryo normal 7.37447 SRR1035239 liver transgenic mCherry control 7.2188 SRR1708344 embryo MUTPS 7.11442 SRR1035237 liver transgenic UHRF1 7.01337 SRR610742 3 dpf express NICD 6.967960000000001 SRR535890 larvae normal 6.9617 SRR749514 24 hpf normal 6.784660000000001 SRR1523214 embryo glut12 morpholino 6.76732 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 6.67661 SRR1039571 gastrointestinal diet 0.1 NPM 6.6558600000000006 SRR1562531 muscle normal 6.40495 SRR831692 embryo normal 6.36107 SRR1188148 embryo Control PBS 0.5 hpi 6.3166199999999995 SRR610740 3 dpf normal 6.307259999999999 SRR527844 24hpf normal 6.23261 SRR1104059 heart kctd10 mut 6.18955 SRR726540 5 dpf normal 6.17711 SRR535986 larvae nhsl1b mut 6.12752 SRR519742 4 dpf VD3 treatment 6.12075 SRR519722 4 dpf FETOH treatment 6.0897 SRR1562532 spleen normal 6.06731 SRR1523211 embryo control morpholino 6.06468 SRR535978 larvae normal 6.04882 SRR1104058 heart normal 6.00484 SRR065197 3 dpf U1C knockout 5.89515 SRR1205154 5dpf transgenic sqET20 5.89049 SRR633516 larvae normal 5.84842 SRR1004786 larvae control morpholino 5.79896 SRR1004789 larvae impdh2 morpholino 5.77566 SRR1188152 embryo Insulin 0.5 hpi 5.7709 SRR633550 larvae exposed to hypoxia stress 5.73955 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.6318 SRR700537 heart Gata4 morpholino 5.60297 SRR038625 embryo traf6 morpholino 5.58882 SRR776509 embryo Salmonella infected 5.4345099999999995 SRR1004788 larvae impdh1b morpholino 5.34914 SRR1188160 embryo Insulin 4 hpi 5.3291 SRR633544 larvae exposed to cold stress 5.3008 SRR1039573 gastrointestinal diet 0.75 NPM 5.25804 SRR038627 embryo control morpholino 5.23779 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 5.16352 SRR1167752 embryo normal 5.142530000000001 SRR527833 5 dpf normal 5.09325 SRR1167757 embryo mpeg1 morpholino and bacterial infection 5.07648 SRR776507 embryo normal 5.07406 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 5.0432 SRR1188156 embryo Control PBS 4 hpi 5.03723 SRR1004787 larvae impdh1a morpholino 5.02572 SRR658537 bud Gata6 morphant 4.9417599999999995 SRR592699 pineal gland normal 4.92949 SRR065196 3 dpf normal 4.9097800000000005 SRR038624 embryo traf6 morpholino and bacterial infection 4.87329 SRR1569491 embryo normal 4.823930000000001 SRR535848 larvae hoxb1b mut 4.76185 SRR776510 embryo Salmonella infected and miR-146 knockdown 4.70654 SRR776508 embryo miR-146 knockdown 4.69264 SRR594769 blood normal 4.67086 SRR1299129 caudal fin Seven days time after treatment 4.66604 SRR535850 larvae hoxb1b mut 4.65186 SRR527832 16-36 hpf normal 4.60187 SRR1167756 embryo mpeg1 morpholino 4.60064 SRR535851 larvae normal 4.59387 SRR535852 larvae hoxb1b mut 4.592230000000001 SRR519747 6 dpf VD3 treatment 4.58788 SRR535849 larvae normal 4.57512 SRR1005529 embryo control morpholino 4.55371 SRR801554 embryo control morpholino 4.54686 SRR038626 embryo control morpholino and bacterial infection 4.4743 SRR535847 larvae normal 4.45643 SRR1004785 larvae normal 4.430219999999999 SRR519727 6 dpf FETOH treatment 4.38154 SRR1167753 embryo bacterial infection 4.35686 SRR1342218 embryo marco morpholino 4.2938 SRR726541 5 dpf infection with Mycobacterium marinum 4.27109 SRR801556 embryo RPS19 and p53 morpholino 4.25169 SRR592703 pineal gland normal 4.2422699999999995 SRR891511 brain normal 4.20769 SRR726542 5 dpf infection with control 4.19318 SRR658533 bud normal 4.1436 SRR800045 muscle normal 4.10849 SRR592700 pineal gland normal 4.04431 SRR592698 pineal gland normal 3.98693 SRR630463 5 dpf normal 3.9477599999999997 SRR1342217 embryo infection with Mycobacterium marinum 3.9302 SRR658535 bud Gata5 morphant 3.9002199999999996 SRR801555 embryo RPS19 morpholino 3.886 SRR1342216 embryo norml 3.8731800000000005 SRR630464 5 dpf injected epidermidis 3.81795 SRR942764 embryo myd88-/- 3.7816199999999998 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.77872 SRR516130 skin male and 5 month 3.7633400000000004 SRR592701 pineal gland normal 3.75146 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.73755 SRR592702 pineal gland normal 3.65032 ERR023143 swim bladder normal 3.58189 SRR700534 heart control morpholino 3.5630900000000003 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 3.5453699999999997 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.5154300000000003 SRR942769 embryo myd88+/+ 3.49755 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.4747199999999996 SRR1167762 embryo ptpn6 morpholino 3.4489099999999997 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.44814 SRR519732 7 dpf FETOH treatment 3.4472 SRR658539 bud Gata5/6 morphant 3.3541 SRR519752 7 dpf VD3 treatment 3.31025 SRR527834 head normal 3.27224 SRR516127 skin male and 5 month 3.2502 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 3.22439 SRR1291414 5 dpi normal 3.22304 SRR516126 skin male and 5 month 3.1303099999999997 SRR1048061 pineal gland dark 3.08615 SRR1534349 larvae DMSO vehicle 2.93718 SRR1028002 head normal 2.91157 SRR1534350 larvae 5 ug/l BDE47 treatment 2.85447 SRR1005530 embryo RPL11 morpholino 2.83719 SRR1291417 5 dpi injected marinum 2.76727 ERR023145 heart normal 2.7396 SRR1048059 pineal gland light 2.73563 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.68364 SRR1028004 head normal 2.61337 SRR514030 retina id2a morpholino 2.5481700000000003 SRR516133 skin male and 5 month 2.5337099999999997 ERR023146 head kidney normal 2.51898 SRR1028003 head normal 2.45152 SRR514028 retina control morpholino 2.44505 SRR891495 heart normal 2.44305 SRR1647680 head kidney SVCV treatment 2.3726 SRR1647679 head kidney normal 2.23394 SRR1647681 head kidney SVCV treatment 2.0571900000000003 ERR594418 retina transgenic flk1 and develop tumors 2.0385400000000002 SRR516122 skin male and 3.5 year 1.9233099999999999 SRR941753 posterior pectoral fin normal 1.9083299999999999 SRR891504 liver normal 1.79152 SRR1562528 eye normal 1.7856900000000002 SRR516128 skin male and 5 month 1.76266 SRR516135 skin male and 5 month 1.7528599999999999 SRR1534351 larvae 500 ug/l BDE47 treatment 1.6866900000000002 SRR1562533 testis normal 1.6835799999999999 SRR891510 muscle normal 1.5711899999999999 SRR516134 skin male and 5 month 1.53551 SRR941749 anterior pectoral fin normal 1.45977 ERR594416 retina transgenic flk1 1.40034 SRR1647682 spleen normal 1.28475 ERR594417 retina normal 1.15751 SRR1299128 caudal fin Three days time after treatment 1.1435 SRR516131 skin male and 5 month 1.11447 SRR516123 skin male and 3.5 year 1.11057 SRR516129 skin male and 5 month 1.05302 SRR1647683 spleen SVCV treatment 1.03956 SRR516132 skin male and 5 month 0.846707 SRR516125 skin male and 3.5 year 0.833218 SRR527835 tail normal 0.77273 SRR516121 skin male and 3.5 year 0.689102 SRR1299124 caudal fin Zero day time after treatment 0.667117 SRR516124 skin male and 3.5 year 0.49454 SRR1647684 spleen SVCV treatment 0.473999 SRR1299127 caudal fin Two days time after treatment 0.28365999999999997 SRR1299125 caudal fin Half day time after treatment 0.27106199999999997 SRR891512 blood normal 0.25987 SRR1299126 caudal fin One day time after treatment 0.2395 SRR748488 sperm normal 0.0858699 SRR372800 2 dpf normal 0.0237496 SRR372796 bud normal 0.0186295 SRR372798 28 hpf normal 0.0179782 SRR957180 heart 7 days after heart tip amputation 0.013845699999999999 SRR1021213 sphere stage normal 0.0116954 SRR372802 5 dpf normal 0.00878979 SRR748491 germ ring normal 0.00644339 SRR748490 1 kcell normal 0.00275433 SRR1648856 brain normal 0.00269898 SRR1021215 sphere stage Mzeomesa 0.00268307 SRR372789 1K cell normal 0.0007523460000000001