sample tissue condition fpkm SRR886456 256 cell 4-thio-UTP metabolic labeling 334.565 SRR886457 512 cell 4-thio-UTP metabolic labeling 313.506 SRR886455 128 cell 4-thio-UTP metabolic labeling 277.39799999999997 SRR748489 egg normal 240.419 SRR516123 skin male and 3.5 year 104.435 SRR516121 skin male and 3.5 year 79.8397 SRR516125 skin male and 3.5 year 60.5554 SRR516122 skin male and 3.5 year 58.7506 SRR1299124 caudal fin Zero day time after treatment 49.0757 SRR748490 1 kcell normal 40.7415 SRR516133 skin male and 5 month 36.9185 SRR891512 blood normal 34.1001 SRR527835 tail normal 33.2863 SRR516132 skin male and 5 month 31.5825 ERR023143 swim bladder normal 31.4885 SRR516131 skin male and 5 month 30.2214 SRR519752 7 dpf VD3 treatment 30.1305 SRR748491 germ ring normal 29.5966 SRR658537 bud Gata6 morphant 27.7987 SRR941749 anterior pectoral fin normal 27.3981 SRR1299126 caudal fin One day time after treatment 27.0465 SRR891510 muscle normal 27.0056 SRR516124 skin male and 3.5 year 25.3615 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 25.3218 SRR516129 skin male and 5 month 25.1416 SRR519732 7 dpf FETOH treatment 24.7296 SRR519747 6 dpf VD3 treatment 23.8369 SRR519727 6 dpf FETOH treatment 23.5683 SRR516126 skin male and 5 month 23.5488 SRR1299125 caudal fin Half day time after treatment 23.1381 SRR1299127 caudal fin Two days time after treatment 22.9597 SRR1021213 sphere stage normal 22.935 SRR941753 posterior pectoral fin normal 22.8214 SRR891495 heart normal 22.5025 SRR527834 head normal 22.178 SRR1299128 caudal fin Three days time after treatment 22.1603 SRR1021215 sphere stage Mzeomesa 22.0175 SRR519722 4 dpf FETOH treatment 21.714000000000002 SRR516135 skin male and 5 month 20.8656 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 20.5385 SRR519742 4 dpf VD3 treatment 19.9594 SRR516127 skin male and 5 month 18.857 SRR1291417 5 dpi injected marinum 18.8217 SRR1167763 embryo ptpn6 morpholino and bacterial infection 17.9981 SRR516130 skin male and 5 month 16.9379 SRR1299129 caudal fin Seven days time after treatment 16.3984 ERR023146 head kidney normal 15.8444 SRR519737 2 dpf VD3 treatment 15.7211 ERR594416 retina transgenic flk1 15.6972 SRR519717 2 dpf FETOH treatment 15.5034 SRR1188156 embryo Control PBS 4 hpi 15.1499 SRR516128 skin male and 5 month 14.6395 SRR658539 bud Gata5/6 morphant 14.0202 SRR748488 sperm normal 14.0153 SRR658533 bud normal 13.1963 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 13.1625 SRR1205160 5dpf transgenic sqET20 and GFP+ 13.0994 SRR516134 skin male and 5 month 12.4622 SRR527840 24hpf normal 12.1568 SRR658545 6 somite Gata6 morphant 12.0581 SRR658535 bud Gata5 morphant 11.1926 SRR527833 5 dpf normal 10.8445 ERR594417 retina normal 10.8058 ERR023145 heart normal 10.7331 SRR726542 5 dpf infection with control 10.6366 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 10.5233 SRR658547 6 somite Gata5/6 morphant 10.4805 SRR1167753 embryo bacterial infection 10.446 SRR633544 larvae exposed to cold stress 10.2708 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 10.1663 SRR038627 embryo control morpholino 10.0947 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 9.96905 SRR1035978 13 hpf rx3-/- 9.90686 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 9.88074 SRR658543 6 somite Gata5 morphan 9.69078 SRR038624 embryo traf6 morpholino and bacterial infection 9.65375 SRR1039571 gastrointestinal diet 0.1 NPM 9.575619999999999 SRR658541 6 somite normal 9.506730000000001 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 9.44089 SRR038626 embryo control morpholino and bacterial infection 9.264380000000001 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 9.09786 SRR1035981 13 hpf rx3+/+ or rx3+/- 9.070789999999999 SRR1534351 larvae 500 ug/l BDE47 treatment 8.97403 SRR891511 brain normal 8.83428 SRR527836 24hpf normal 8.77547 SRR1562531 muscle normal 8.7525 SRR1291414 5 dpi normal 8.186760000000001 SRR749515 24 hpf eif3ha morphant 8.14912 SRR1039573 gastrointestinal diet 0.75 NPM 7.84444 SRR1167762 embryo ptpn6 morpholino 7.774789999999999 SRR1647679 head kidney normal 7.718160000000001 SRR038625 embryo traf6 morpholino 7.660139999999999 SRR726541 5 dpf infection with Mycobacterium marinum 7.587110000000001 SRR1562528 eye normal 7.53768 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 7.46295 SRR797914 embryo pbx2/4-MO 7.4426 SRR797917 embryo pbx2/4-MO and prdm1-/- 7.3909899999999995 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 7.279560000000001 SRR633516 larvae normal 7.230689999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 7.068219999999999 SRR1188148 embryo Control PBS 0.5 hpi 6.9645 SRR1035984 13 hpf normal 6.935510000000001 SRR797911 embryo prdm1-/- 6.80117 SRR594771 endothelium normal 6.72288 SRR065197 3 dpf U1C knockout 6.722569999999999 SRR797908 embryo normal 6.7038899999999995 SRR1167757 embryo mpeg1 morpholino and bacterial infection 6.6976 SRR1708346 embryo SIBPS 6.67152 SRR749514 24 hpf normal 6.617999999999999 SRR800049 sphere stage control treatment 6.49051 SRR592701 pineal gland normal 6.41597 SRR891504 liver normal 6.32238 SRR610741 3 dpf express Ras 6.24977 SRR1342217 embryo infection with Mycobacterium marinum 6.2466 SRR726540 5 dpf normal 6.23297 SRR942769 embryo myd88+/+ 6.114319999999999 SRR633550 larvae exposed to hypoxia stress 5.98104 SRR1569491 embryo normal 5.911969999999999 SRR630464 5 dpf injected epidermidis 5.83485 SRR527832 16-36 hpf normal 5.810219999999999 SRR594769 blood normal 5.77704 SRR776509 embryo Salmonella infected 5.75824 SRR1188160 embryo Insulin 4 hpi 5.7481599999999995 SRR776510 embryo Salmonella infected and miR-146 knockdown 5.73718 SRR1167756 embryo mpeg1 morpholino 5.64987 SRR1167752 embryo normal 5.648219999999999 SRR1004788 larvae impdh1b morpholino 5.64394 SRR942764 embryo myd88-/- 5.61359 SRR800046 sphere stage 5azaCyD treatment 5.58675 SRR630463 5 dpf normal 5.57501 SRR610742 3 dpf express NICD 5.565519999999999 SRR1708344 embryo MUTPS 5.4278900000000005 SRR776508 embryo miR-146 knockdown 5.20911 SRR592702 pineal gland normal 5.1437800000000005 SRR1005530 embryo RPL11 morpholino 5.12381 SRR610740 3 dpf normal 5.08319 SRR527844 24hpf normal 5.03337 SRR776507 embryo normal 5.00701 SRR1004787 larvae impdh1a morpholino 5.00585 SRR1534350 larvae 5 ug/l BDE47 treatment 4.95338 SRR1188152 embryo Insulin 0.5 hpi 4.88345 SRR1523211 embryo control morpholino 4.8762099999999995 SRR1534349 larvae DMSO vehicle 4.8073 SRR1562529 intestine and pancreas normal 4.8041 SRR1342218 embryo marco morpholino 4.79545 SRR592700 pineal gland normal 4.78399 SRR1104058 heart normal 4.7553 SRR535852 larvae hoxb1b mut 4.737 SRR1523214 embryo glut12 morpholino 4.65984 SRR1647681 head kidney SVCV treatment 4.60719 SRR1028002 head normal 4.51101 SRR1004785 larvae normal 4.48837 SRR1004789 larvae impdh2 morpholino 4.45865 SRR535913 larvae krox mut 4.44457 SRR800043 sphere stage normal 4.4421800000000005 SRR1035237 liver transgenic UHRF1 4.38013 SRR535847 larvae normal 4.37935 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 4.35613 SRR1005529 embryo control morpholino 4.30837 SRR801554 embryo control morpholino 4.30184 SRR535943 larvae vangl mut 4.15156 SRR592703 pineal gland normal 4.08449 SRR801555 embryo RPS19 morpholino 4.03113 ERR023144 brain normal 3.96852 SRR1562533 testis normal 3.9356800000000005 SRR535890 larvae normal 3.8847199999999997 SRR1004786 larvae control morpholino 3.83567 SRR1028004 head normal 3.82864 SRR535978 larvae normal 3.7938199999999997 SRR535851 larvae normal 3.78815 SRR065196 3 dpf normal 3.73565 SRR1048061 pineal gland dark 3.7073699999999996 SRR535849 larvae normal 3.69199 SRR535986 larvae nhsl1b mut 3.6909699999999996 SRR1647680 head kidney SVCV treatment 3.66565 SRR1569495 embryo normal 3.66511 SRR535850 larvae hoxb1b mut 3.6550800000000003 SRR1048059 pineal gland light 3.65461 ERR594418 retina transgenic flk1 and develop tumors 3.6194800000000003 SRR535926 larvae normal 3.5920699999999997 SRR1342216 embryo norml 3.41088 SRR535848 larvae hoxb1b mut 3.3912699999999996 SRR1104059 heart kctd10 mut 3.3502400000000003 SRR700537 heart Gata4 morpholino 3.14895 SRR1708345 embryo SIBAS 3.1161 SRR800037 egg normal 3.06624 SRR592699 pineal gland normal 3.04696 SRR592698 pineal gland normal 3.04656 SRR801556 embryo RPS19 and p53 morpholino 3.01211 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.97825 SRR1205154 5dpf transgenic sqET20 2.85818 SRR831692 embryo normal 2.67528 SRR1562530 liver normal 2.66138 SRR1035239 liver transgenic mCherry control 2.40224 SRR1708343 embryo MUTAS 2.3178099999999997 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.30749 SRR1562532 spleen normal 1.51994 SRR1565815 brain normal 1.47233 SRR1565811 brain normal 1.4525 SRR514028 retina control morpholino 1.38283 SRR700534 heart control morpholino 1.34635 SRR1565813 brain normal 1.30421 SRR1647684 spleen SVCV treatment 1.30409 SRR1028003 head normal 1.27035 SRR1565809 brain normal 1.14935 SRR1565805 brain normal 1.01115 SRR1647683 spleen SVCV treatment 0.991833 SRR800045 muscle normal 0.982549 SRR1565819 brain normal 0.9644940000000001 SRR1565807 brain normal 0.9605469999999999 SRR1647682 spleen normal 0.8762780000000001 SRR1565817 brain normal 0.8672629999999999 SRR514030 retina id2a morpholino 0.718493 SRR372793 shield normal 0.0598961 SRR957181 heart normal 0.055629 SRR372802 5 dpf normal 0.0103149 SRR372798 28 hpf normal 0.0101899 SRR372787 2-4 cell normal 0.00759474 SRR1049814 256 cell normal 0.00302632