sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 16.1174 SRR1299125 caudal fin Half day time after treatment 13.9075 SRR1299126 caudal fin One day time after treatment 12.4105 SRR516133 skin male and 5 month 12.305 SRR1299129 caudal fin Seven days time after treatment 10.6708 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 10.4023 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 10.3234 SRR516134 skin male and 5 month 10.1444 SRR941749 anterior pectoral fin normal 9.770710000000001 SRR1205160 5dpf transgenic sqET20 and GFP+ 9.6905 SRR1708346 embryo SIBPS 9.413889999999999 SRR1299127 caudal fin Two days time after treatment 9.33636 SRR516126 skin male and 5 month 8.6088 SRR1299128 caudal fin Three days time after treatment 8.35914 SRR527836 24hpf normal 7.8516 SRR527840 24hpf normal 7.6269100000000005 SRR1708344 embryo MUTPS 7.46117 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.310389999999999 ERR023143 swim bladder normal 7.245239999999999 SRR941753 posterior pectoral fin normal 7.21738 SRR516129 skin male and 5 month 7.20448 SRR516130 skin male and 5 month 7.142710000000001 SRR516135 skin male and 5 month 6.66945 SRR516128 skin male and 5 month 6.65747 SRR658541 6 somite normal 6.33462 SRR516131 skin male and 5 month 6.12058 SRR516123 skin male and 3.5 year 6.06656 SRR516127 skin male and 5 month 5.9767 SRR516121 skin male and 3.5 year 5.9278900000000005 SRR1104058 heart normal 5.92587 SRR658545 6 somite Gata6 morphant 5.78325 SRR516132 skin male and 5 month 5.77602 SRR1167763 embryo ptpn6 morpholino and bacterial infection 5.6839699999999995 SRR658533 bud normal 5.5967 SRR776508 embryo miR-146 knockdown 5.51861 SRR800037 egg normal 5.4844 SRR1562533 testis normal 5.45595 SRR1104059 heart kctd10 mut 5.351430000000001 SRR749515 24 hpf eif3ha morphant 5.34858 SRR776510 embryo Salmonella infected and miR-146 knockdown 5.32861 SRR1035981 13 hpf rx3+/+ or rx3+/- 5.11268 SRR516124 skin male and 3.5 year 4.92328 SRR1708345 embryo SIBAS 4.91719 SRR516125 skin male and 3.5 year 4.66421 SRR535978 larvae normal 4.6641900000000005 SRR1035978 13 hpf rx3-/- 4.61255 SRR797911 embryo prdm1-/- 4.54209 ERR023146 head kidney normal 4.53715 SRR658537 bud Gata6 morphant 4.47382 SRR749514 24 hpf normal 4.444380000000001 SRR535913 larvae krox mut 4.4154800000000005 SRR776507 embryo normal 4.303 SRR886457 512 cell 4-thio-UTP metabolic labeling 4.24849 SRR535943 larvae vangl mut 4.23191 SRR800046 sphere stage 5azaCyD treatment 4.187119999999999 SRR1291417 5 dpi injected marinum 4.18166 SRR748491 germ ring normal 4.1472 SRR535926 larvae normal 4.11866 SRR535986 larvae nhsl1b mut 4.09115 SRR831692 embryo normal 4.08809 SRR797917 embryo pbx2/4-MO and prdm1-/- 4.06383 SRR1167753 embryo bacterial infection 3.96449 SRR797914 embryo pbx2/4-MO 3.9471199999999995 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.8742 SRR797908 embryo normal 3.85489 SRR1708343 embryo MUTAS 3.8463 SRR776509 embryo Salmonella infected 3.8460099999999997 SRR516122 skin male and 3.5 year 3.83249 SRR535890 larvae normal 3.8264099999999996 SRR658547 6 somite Gata5/6 morphant 3.77395 SRR1167752 embryo normal 3.7719400000000003 SRR1021213 sphere stage normal 3.74539 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.7333 SRR527844 24hpf normal 3.66234 SRR886456 256 cell 4-thio-UTP metabolic labeling 3.64601 SRR748489 egg normal 3.6013900000000003 SRR610742 3 dpf express NICD 3.57798 SRR1167756 embryo mpeg1 morpholino 3.5423699999999996 SRR527834 head normal 3.5041800000000003 ERR023145 heart normal 3.48711 SRR800043 sphere stage normal 3.47511 SRR610740 3 dpf normal 3.4746099999999998 SRR886455 128 cell 4-thio-UTP metabolic labeling 3.4658800000000003 SRR610741 3 dpf express Ras 3.4623699999999995 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.43645 SRR1523211 embryo control morpholino 3.40268 SRR1342217 embryo infection with Mycobacterium marinum 3.36277 SRR065197 3 dpf U1C knockout 3.2844599999999997 SRR1342216 embryo norml 3.25654 SRR527833 5 dpf normal 3.22953 SRR942764 embryo myd88-/- 3.18531 SRR527832 16-36 hpf normal 3.15805 SRR1188148 embryo Control PBS 0.5 hpi 3.14818 SRR658543 6 somite Gata5 morphan 3.08854 SRR519737 2 dpf VD3 treatment 3.0548900000000003 SRR630464 5 dpf injected epidermidis 3.0474900000000003 SRR1562528 eye normal 3.04454 SRR594771 endothelium normal 3.03967 SRR800049 sphere stage control treatment 3.0304599999999997 SRR1188156 embryo Control PBS 4 hpi 3.02604 SRR1188152 embryo Insulin 0.5 hpi 3.00126 SRR658539 bud Gata5/6 morphant 2.9897299999999998 SRR1167762 embryo ptpn6 morpholino 2.9718 SRR519717 2 dpf FETOH treatment 2.96273 SRR942769 embryo myd88+/+ 2.91111 SRR038627 embryo control morpholino 2.89692 SRR630463 5 dpf normal 2.88836 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.8834299999999997 SRR1028002 head normal 2.87567 SRR1021215 sphere stage Mzeomesa 2.8657 SRR1523214 embryo glut12 morpholino 2.86368 SRR535848 larvae hoxb1b mut 2.8370599999999997 SRR535847 larvae normal 2.8218900000000002 SRR726540 5 dpf normal 2.81989 SRR658535 bud Gata5 morphant 2.81834 SRR1569491 embryo normal 2.80158 ERR023144 brain normal 2.7757400000000003 SRR535850 larvae hoxb1b mut 2.75449 SRR535852 larvae hoxb1b mut 2.73699 SRR065196 3 dpf normal 2.7164900000000003 SRR1291414 5 dpi normal 2.70454 SRR535849 larvae normal 2.67055 SRR514028 retina control morpholino 2.65285 SRR1342218 embryo marco morpholino 2.64657 SRR1188160 embryo Insulin 4 hpi 2.64378 SRR519752 7 dpf VD3 treatment 2.64357 SRR519722 4 dpf FETOH treatment 2.62113 SRR1565805 brain normal 2.60744 SRR1565807 brain normal 2.6042 SRR535851 larvae normal 2.53226 SRR1565817 brain normal 2.51987 SRR700537 heart Gata4 morpholino 2.4939 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.41328 SRR519742 4 dpf VD3 treatment 2.40952 SRR1039571 gastrointestinal diet 0.1 NPM 2.4016599999999997 SRR1565809 brain normal 2.38879 SRR1035984 13 hpf normal 2.3696900000000003 SRR1562529 intestine and pancreas normal 2.36076 SRR1565811 brain normal 2.327 SRR038626 embryo control morpholino and bacterial infection 2.32333 SRR519747 6 dpf VD3 treatment 2.2956 SRR038625 embryo traf6 morpholino 2.29033 SRR1565819 brain normal 2.28442 SRR726542 5 dpf infection with control 2.28287 SRR726541 5 dpf infection with Mycobacterium marinum 2.26934 SRR527835 tail normal 2.2478 SRR519727 6 dpf FETOH treatment 2.2287 SRR038624 embryo traf6 morpholino and bacterial infection 2.2109900000000002 SRR1562531 muscle normal 2.20934 SRR1569495 embryo normal 2.2078599999999997 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.20282 SRR1562530 liver normal 2.17742 SRR519732 7 dpf FETOH treatment 2.16852 SRR1565815 brain normal 2.15177 SRR633544 larvae exposed to cold stress 2.13558 SRR1028004 head normal 2.13275 SRR1004786 larvae control morpholino 2.12569 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 2.12493 SRR700534 heart control morpholino 2.11902 SRR1028003 head normal 2.11555 SRR514030 retina id2a morpholino 2.0756 SRR633550 larvae exposed to hypoxia stress 2.03654 SRR1565813 brain normal 1.99975 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.98947 SRR1534351 larvae 500 ug/l BDE47 treatment 1.95787 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.9326299999999998 SRR1205154 5dpf transgenic sqET20 1.90553 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.8912799999999999 SRR1004789 larvae impdh2 morpholino 1.8744599999999998 SRR1004788 larvae impdh1b morpholino 1.85582 SRR592701 pineal gland normal 1.8458700000000001 SRR633516 larvae normal 1.82562 SRR1562532 spleen normal 1.77142 SRR592699 pineal gland normal 1.75928 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.75462 SRR891504 liver normal 1.74899 SRR594769 blood normal 1.74364 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.71897 SRR592703 pineal gland normal 1.70861 SRR592700 pineal gland normal 1.66615 SRR592702 pineal gland normal 1.5933700000000002 SRR592698 pineal gland normal 1.51039 ERR594417 retina normal 1.50098 SRR891510 muscle normal 1.4364700000000001 SRR1039573 gastrointestinal diet 0.75 NPM 1.42452 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.3721299999999998 ERR594418 retina transgenic flk1 and develop tumors 1.2198799999999999 SRR748490 1 kcell normal 1.20908 SRR1004787 larvae impdh1a morpholino 1.20069 SRR891511 brain normal 1.1740899999999999 SRR800045 muscle normal 1.17125 SRR1647682 spleen normal 1.1533 SRR891512 blood normal 1.14927 SRR1035237 liver transgenic UHRF1 1.14687 SRR1004785 larvae normal 1.12991 SRR1647683 spleen SVCV treatment 1.12727 ERR594416 retina transgenic flk1 1.09752 SRR1534350 larvae 5 ug/l BDE47 treatment 1.09212 SRR1647684 spleen SVCV treatment 1.08433 SRR1035239 liver transgenic mCherry control 1.0822399999999999 SRR748488 sperm normal 1.0764200000000002 SRR1534349 larvae DMSO vehicle 1.04267 SRR1647681 head kidney SVCV treatment 1.00829 SRR1647679 head kidney normal 0.9463790000000001 SRR1647680 head kidney SVCV treatment 0.9400729999999999 SRR891495 heart normal 0.887333 SRR1048061 pineal gland dark 0.806584 SRR1048059 pineal gland light 0.745062 SRR1005530 embryo RPL11 morpholino 0.544632 SRR1005529 embryo control morpholino 0.47360699999999994 SRR801554 embryo control morpholino 0.472894 SRR801556 embryo RPS19 and p53 morpholino 0.38309699999999997 SRR801555 embryo RPS19 morpholino 0.360344 SRR372787 2-4 cell normal 0.0125093 SRR372793 shield normal 0.00668413 SRR372796 bud normal 0.00619203 SRR1621206 embryo normal 0.00586613 SRR372789 1K cell normal 0.00540304 SRR1648856 brain normal 0.00237448