sample tissue condition fpkm SRR1299125 caudal fin Half day time after treatment 16.418 SRR1299127 caudal fin Two days time after treatment 14.7013 SRR1562529 intestine and pancreas normal 11.1373 ERR023143 swim bladder normal 10.9385 SRR1299128 caudal fin Three days time after treatment 10.3342 ERR023146 head kidney normal 10.3262 SRR1299126 caudal fin One day time after treatment 9.82399 SRR516133 skin male and 5 month 9.13326 SRR1299129 caudal fin Seven days time after treatment 9.04541 SRR1299124 caudal fin Zero day time after treatment 8.80058 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.3145 SRR941749 anterior pectoral fin normal 7.313680000000001 SRR516124 skin male and 3.5 year 7.099710000000001 SRR516125 skin male and 3.5 year 6.89951 SRR516123 skin male and 3.5 year 6.86684 SRR516126 skin male and 5 month 6.531630000000001 ERR023144 brain normal 6.44719 SRR1205160 5dpf transgenic sqET20 and GFP+ 6.39741 SRR1039571 gastrointestinal diet 0.1 NPM 6.39622 SRR516121 skin male and 3.5 year 6.03378 SRR516127 skin male and 5 month 6.030930000000001 SRR658539 bud Gata5/6 morphant 5.84547 SRR516128 skin male and 5 month 5.77762 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 5.57204 SRR516131 skin male and 5 month 5.53134 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 5.172540000000001 SRR516132 skin male and 5 month 5.16713 SRR516122 skin male and 3.5 year 5.16357 SRR516134 skin male and 5 month 5.045 SRR658535 bud Gata5 morphant 4.9474 SRR516129 skin male and 5 month 4.77473 SRR658547 6 somite Gata5/6 morphant 4.53714 SRR1708344 embryo MUTPS 4.414680000000001 SRR516135 skin male and 5 month 4.33668 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 4.32825 SRR1708346 embryo SIBPS 4.31607 SRR658533 bud normal 3.998 SRR941753 posterior pectoral fin normal 3.9575099999999996 SRR1647679 head kidney normal 3.95609 SRR1647680 head kidney SVCV treatment 3.87163 SRR658537 bud Gata6 morphant 3.8220300000000003 SRR516130 skin male and 5 month 3.80119 SRR658545 6 somite Gata6 morphant 3.7351300000000003 SRR1188156 embryo Control PBS 4 hpi 3.62086 SRR658543 6 somite Gata5 morphan 3.5854 SRR1647681 head kidney SVCV treatment 3.5277800000000004 SRR1562530 liver normal 3.26417 SRR1188148 embryo Control PBS 0.5 hpi 3.15023 SRR1708345 embryo SIBAS 3.07297 SRR1039573 gastrointestinal diet 0.75 NPM 3.06065 SRR797914 embryo pbx2/4-MO 2.97448 SRR1188152 embryo Insulin 0.5 hpi 2.9532 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.8583 SRR1523211 embryo control morpholino 2.80455 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.7939999999999996 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.75782 SRR942769 embryo myd88+/+ 2.75264 SRR1291417 5 dpi injected marinum 2.71935 SRR630464 5 dpf injected epidermidis 2.69739 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.68391 SRR776507 embryo normal 2.65879 SRR749515 24 hpf eif3ha morphant 2.64261 SRR658541 6 somite normal 2.62204 SRR514028 retina control morpholino 2.58493 SRR527840 24hpf normal 2.54242 SRR1104058 heart normal 2.53428 SRR630463 5 dpf normal 2.5318 SRR776510 embryo Salmonella infected and miR-146 knockdown 2.47668 SRR1523214 embryo glut12 morpholino 2.46385 SRR1167753 embryo bacterial infection 2.4614599999999998 SRR1562528 eye normal 2.4501 SRR1205154 5dpf transgenic sqET20 2.44345 SRR1104059 heart kctd10 mut 2.42392 SRR1188160 embryo Insulin 4 hpi 2.3973 SRR1708343 embryo MUTAS 2.3708 SRR797911 embryo prdm1-/- 2.3414 SRR800046 sphere stage 5azaCyD treatment 2.33232 SRR610741 3 dpf express Ras 2.25984 SRR1342216 embryo norml 2.25501 SRR1534350 larvae 5 ug/l BDE47 treatment 2.2147 SRR942764 embryo myd88-/- 2.2044900000000003 SRR1004788 larvae impdh1b morpholino 2.17739 SRR1167756 embryo mpeg1 morpholino 2.17522 SRR797908 embryo normal 2.13508 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 2.11443 SRR594771 endothelium normal 2.1107400000000003 SRR610740 3 dpf normal 2.10567 SRR1534349 larvae DMSO vehicle 2.08681 SRR1291414 5 dpi normal 2.0434099999999997 SRR1167752 embryo normal 2.0377099999999997 SRR700537 heart Gata4 morpholino 2.02882 SRR535978 larvae normal 2.00545 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.9485299999999999 SRR749514 24 hpf normal 1.92763 ERR023145 heart normal 1.8647099999999999 SRR527834 head normal 1.8529799999999998 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.8360900000000002 SRR1028002 head normal 1.72138 SRR1562531 muscle normal 1.71655 SRR1534351 larvae 500 ug/l BDE47 treatment 1.6921700000000002 SRR527836 24hpf normal 1.6889900000000002 SRR535851 larvae normal 1.68451 SRR800049 sphere stage control treatment 1.6613200000000001 SRR535986 larvae nhsl1b mut 1.6515900000000001 SRR633550 larvae exposed to hypoxia stress 1.6274899999999999 SRR527844 24hpf normal 1.61516 SRR633544 larvae exposed to cold stress 1.60883 SRR527835 tail normal 1.5934700000000002 SRR535943 larvae vangl mut 1.59296 SRR1342217 embryo infection with Mycobacterium marinum 1.5717700000000001 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.5339 SRR592699 pineal gland normal 1.4734 SRR1342218 embryo marco morpholino 1.4675799999999999 SRR633516 larvae normal 1.44761 SRR1035978 13 hpf rx3-/- 1.4450399999999999 SRR831692 embryo normal 1.42601 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.42262 SRR535926 larvae normal 1.42045 SRR535849 larvae normal 1.41313 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.3783299999999998 SRR527833 5 dpf normal 1.36503 SRR535913 larvae krox mut 1.35035 SRR535847 larvae normal 1.3498700000000001 SRR519727 6 dpf FETOH treatment 1.3412600000000001 SRR514030 retina id2a morpholino 1.31936 SRR535852 larvae hoxb1b mut 1.29055 SRR1004786 larvae control morpholino 1.2476 SRR519732 7 dpf FETOH treatment 1.24065 SRR535890 larvae normal 1.2078200000000001 SRR535850 larvae hoxb1b mut 1.20295 ERR594417 retina normal 1.19265 SRR726540 5 dpf normal 1.19035 SRR592701 pineal gland normal 1.18405 SRR519742 4 dpf VD3 treatment 1.17482 SRR535848 larvae hoxb1b mut 1.16962 SRR038624 embryo traf6 morpholino and bacterial infection 1.1532200000000001 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.13621 ERR594418 retina transgenic flk1 and develop tumors 1.12943 SRR519717 2 dpf FETOH treatment 1.1193600000000001 SRR594769 blood normal 1.11548 ERR594416 retina transgenic flk1 1.0998 SRR1048059 pineal gland light 1.09584 SRR519747 6 dpf VD3 treatment 1.08949 SRR519722 4 dpf FETOH treatment 1.08655 SRR1562533 testis normal 1.05996 SRR700534 heart control morpholino 1.05811 SRR776508 embryo miR-146 knockdown 1.05636 SRR610742 3 dpf express NICD 1.04877 SRR776509 embryo Salmonella infected 1.04226 SRR1167762 embryo ptpn6 morpholino 0.9659129999999999 SRR891512 blood normal 0.9638690000000001 SRR519752 7 dpf VD3 treatment 0.961427 SRR1569491 embryo normal 0.959707 SRR1035239 liver transgenic mCherry control 0.946052 SRR1562532 spleen normal 0.943731 SRR726541 5 dpf infection with Mycobacterium marinum 0.9121819999999999 SRR065197 3 dpf U1C knockout 0.8966620000000001 SRR1035984 13 hpf normal 0.8940440000000001 SRR527832 16-36 hpf normal 0.893926 SRR1004785 larvae normal 0.865426 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.8485729999999999 SRR519737 2 dpf VD3 treatment 0.8227129999999999 SRR726542 5 dpf infection with control 0.822293 SRR891510 muscle normal 0.798428 SRR592698 pineal gland normal 0.771347 SRR038627 embryo control morpholino 0.7621100000000001 SRR1028004 head normal 0.753275 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.735226 SRR038626 embryo control morpholino and bacterial infection 0.679339 SRR1569495 embryo normal 0.67551 SRR801555 embryo RPS19 morpholino 0.6679930000000001 SRR592700 pineal gland normal 0.6592319999999999 SRR1035237 liver transgenic UHRF1 0.617174 SRR065196 3 dpf normal 0.608687 SRR038625 embryo traf6 morpholino 0.582277 SRR800045 muscle normal 0.560556 SRR1048061 pineal gland dark 0.5503 SRR1028003 head normal 0.461239 SRR1004789 larvae impdh2 morpholino 0.45022399999999996 SRR1004787 larvae impdh1a morpholino 0.44663400000000003 SRR592702 pineal gland normal 0.43669600000000003 SRR1005529 embryo control morpholino 0.418317 SRR801554 embryo control morpholino 0.417508 SRR801556 embryo RPS19 and p53 morpholino 0.386919 SRR1647684 spleen SVCV treatment 0.384705 SRR1647683 spleen SVCV treatment 0.372026 SRR1647682 spleen normal 0.362748 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.34562600000000004 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.25359899999999996 SRR1565815 brain normal 0.24659699999999998 SRR1565813 brain normal 0.245459 SRR891511 brain normal 0.223675 SRR1565817 brain normal 0.21943000000000001 SRR592703 pineal gland normal 0.21086100000000002 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.205619 SRR1565811 brain normal 0.18024500000000002 SRR1565807 brain normal 0.17564100000000002 SRR1565809 brain normal 0.154886 SRR957181 heart normal 0.152656 SRR1565805 brain normal 0.122313 SRR1565819 brain normal 0.101962 SRR957180 heart 7 days after heart tip amputation 0.0609245 SRR891495 heart normal 0.0581803 SRR372796 bud normal 0.0307038 SRR372800 2 dpf normal 0.0262027 SRR1648856 brain normal 0.0215326 SRR800043 sphere stage normal 0.0178389 SRR1648854 brain normal 0.0157601 SRR372793 shield normal 0.0150959 SRR372798 28 hpf normal 0.009852799999999998 SRR372802 5 dpf normal 0.00978954 SRR800037 egg normal 0.000318328