sample tissue condition fpkm SRR514028 retina control morpholino 5.02365 SRR594769 blood normal 3.5084 SRR594771 endothelium normal 3.11762 SRR1205154 5dpf transgenic sqET20 2.61409 SRR514030 retina id2a morpholino 2.16038 SRR776509 embryo Salmonella infected 2.0104900000000003 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.00665 SRR535926 larvae normal 1.9277099999999998 SRR749514 24 hpf normal 1.91471 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.89085 SRR776508 embryo miR-146 knockdown 1.88465 SRR1004786 larvae control morpholino 1.7747099999999998 SRR658535 bud Gata5 morphant 1.7018 SRR658541 6 somite normal 1.67841 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.6772099999999999 SRR535943 larvae vangl mut 1.64237 SRR658543 6 somite Gata5 morphan 1.57901 SRR658533 bud normal 1.5782100000000001 SRR1004788 larvae impdh1b morpholino 1.5557299999999998 SRR658547 6 somite Gata5/6 morphant 1.44262 ERR023146 head kidney normal 1.3498299999999999 SRR776507 embryo normal 1.30039 SRR658539 bud Gata5/6 morphant 1.2197200000000001 SRR749515 24 hpf eif3ha morphant 1.19981 SRR700537 heart Gata4 morpholino 1.10704 SRR1104058 heart normal 1.09982 SRR700534 heart control morpholino 0.9849370000000001 SRR1104059 heart kctd10 mut 0.884992 SRR658537 bud Gata6 morphant 0.81338 SRR535890 larvae normal 0.813211 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.723494 SRR658545 6 somite Gata6 morphant 0.718223 SRR1167756 embryo mpeg1 morpholino 0.703225 SRR630463 5 dpf normal 0.688439 SRR1569495 embryo normal 0.660512 SRR1708345 embryo SIBAS 0.652622 ERR023143 swim bladder normal 0.646736 SRR527832 16-36 hpf normal 0.630146 SRR748491 germ ring normal 0.604143 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.591589 SRR1188152 embryo Insulin 0.5 hpi 0.588275 SRR1167762 embryo ptpn6 morpholino 0.586967 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.552111 SRR1167752 embryo normal 0.54492 SRR610741 3 dpf express Ras 0.544285 SRR630464 5 dpf injected epidermidis 0.537351 SRR1342217 embryo infection with Mycobacterium marinum 0.527197 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.52157 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.5210239999999999 SRR527840 24hpf normal 0.5173810000000001 SRR527836 24hpf normal 0.517018 SRR527844 24hpf normal 0.509941 SRR797911 embryo prdm1-/- 0.5058060000000001 SRR038625 embryo traf6 morpholino 0.479046 SRR797914 embryo pbx2/4-MO 0.475087 SRR1004789 larvae impdh2 morpholino 0.473337 SRR535913 larvae krox mut 0.461264 SRR1299129 caudal fin Seven days time after treatment 0.45431800000000006 SRR1004785 larvae normal 0.449797 SRR065196 3 dpf normal 0.43870600000000004 SRR519737 2 dpf VD3 treatment 0.435883 SRR1021215 sphere stage Mzeomesa 0.432889 SRR1167753 embryo bacterial infection 0.42749799999999993 SRR519717 2 dpf FETOH treatment 0.421604 SRR038624 embryo traf6 morpholino and bacterial infection 0.418763 SRR610740 3 dpf normal 0.41192700000000004 SRR535978 larvae normal 0.403817 SRR1523214 embryo glut12 morpholino 0.397066 SRR633544 larvae exposed to cold stress 0.38726 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.37716700000000003 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.37259699999999996 SRR797908 embryo normal 0.36646599999999996 SRR1035978 13 hpf rx3-/- 0.345817 ERR023145 heart normal 0.338687 SRR535986 larvae nhsl1b mut 0.327515 SRR1708346 embryo SIBPS 0.323071 SRR1562533 testis normal 0.322314 SRR038627 embryo control morpholino 0.309917 SRR1004787 larvae impdh1a morpholino 0.308688 SRR1708344 embryo MUTPS 0.306686 SRR1291417 5 dpi injected marinum 0.306352 SRR1188148 embryo Control PBS 0.5 hpi 0.304556 SRR1523211 embryo control morpholino 0.30438200000000004 SRR633516 larvae normal 0.29889499999999997 SRR1299126 caudal fin One day time after treatment 0.297313 SRR726540 5 dpf normal 0.29438000000000003 SRR942764 embryo myd88-/- 0.289379 SRR038626 embryo control morpholino and bacterial infection 0.286667 SRR942769 embryo myd88+/+ 0.281935 SRR065197 3 dpf U1C knockout 0.265258 SRR535848 larvae hoxb1b mut 0.26205100000000003 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.260437 SRR1188156 embryo Control PBS 4 hpi 0.258495 SRR1021213 sphere stage normal 0.25451999999999997 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.246929 SRR1188160 embryo Insulin 4 hpi 0.24487899999999999 SRR1342216 embryo norml 0.24441999999999997 SRR516124 skin male and 3.5 year 0.235744 SRR1342218 embryo marco morpholino 0.223883 SRR535850 larvae hoxb1b mut 0.223427 SRR800046 sphere stage 5azaCyD treatment 0.221485 SRR800043 sphere stage normal 0.21624000000000002 SRR592699 pineal gland normal 0.20772 SRR516122 skin male and 3.5 year 0.20695999999999998 SRR535847 larvae normal 0.20677399999999999 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.204335 SRR726542 5 dpf infection with control 0.203344 SRR633550 larvae exposed to hypoxia stress 0.200273 SRR1291414 5 dpi normal 0.198711 SRR535849 larvae normal 0.19722699999999999 SRR1647680 head kidney SVCV treatment 0.19185 SRR516126 skin male and 5 month 0.190118 SRR535851 larvae normal 0.188899 SRR1647679 head kidney normal 0.186025 SRR1562529 intestine and pancreas normal 0.184446 SRR535852 larvae hoxb1b mut 0.177552 SRR527833 5 dpf normal 0.175744 SRR831692 embryo normal 0.17225 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.165667 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.16381500000000002 SRR941749 anterior pectoral fin normal 0.15858699999999998 SRR610742 3 dpf express NICD 0.156815 SRR1028002 head normal 0.14732699999999999 SRR1708343 embryo MUTAS 0.137809 SRR519742 4 dpf VD3 treatment 0.137702 SRR519722 4 dpf FETOH treatment 0.136775 SRR1035984 13 hpf normal 0.12493800000000001 SRR941753 posterior pectoral fin normal 0.121502 SRR519747 6 dpf VD3 treatment 0.115096 SRR1569491 embryo normal 0.114025 SRR592700 pineal gland normal 0.11343199999999999 SRR1299127 caudal fin Two days time after treatment 0.106699 ERR023144 brain normal 0.100849 SRR1562530 liver normal 0.0986655 SRR516134 skin male and 5 month 0.09563150000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.0911985 SRR519727 6 dpf FETOH treatment 0.0904545 SRR1647681 head kidney SVCV treatment 0.0896298 SRR726541 5 dpf infection with Mycobacterium marinum 0.08702760000000001 SRR516133 skin male and 5 month 0.0849456 SRR1647683 spleen SVCV treatment 0.0820773 SRR1299128 caudal fin Three days time after treatment 0.0809928 SRR1562528 eye normal 0.07347619999999999 SRR516131 skin male and 5 month 0.0708972 ERR594418 retina transgenic flk1 and develop tumors 0.0699934 SRR592701 pineal gland normal 0.06662699999999999 SRR1035237 liver transgenic UHRF1 0.06631260000000001 SRR519732 7 dpf FETOH treatment 0.06371130000000001 SRR800049 sphere stage control treatment 0.0583232 SRR1048061 pineal gland dark 0.055322 SRR516128 skin male and 5 month 0.054288800000000005 SRR1005530 embryo RPL11 morpholino 0.05277130000000001 SRR748488 sperm normal 0.0506923 SRR516121 skin male and 3.5 year 0.049719400000000004 SRR516127 skin male and 5 month 0.048440699999999996 SRR527834 head normal 0.0483529 SRR519752 7 dpf VD3 treatment 0.042510900000000004 ERR594416 retina transgenic flk1 0.0408766 SRR801556 embryo RPS19 and p53 morpholino 0.0406175 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.0400774 SRR1534349 larvae DMSO vehicle 0.039595 SRR527835 tail normal 0.039070099999999996 SRR516135 skin male and 5 month 0.0352452 ERR594417 retina normal 0.034858999999999994 SRR1565811 brain normal 0.0324401 SRR1028004 head normal 0.0320642 SRR516129 skin male and 5 month 0.030865499999999997 SRR1534351 larvae 500 ug/l BDE47 treatment 0.028874900000000002 SRR516125 skin male and 3.5 year 0.0274819 SRR1647682 spleen normal 0.026779700000000004 SRR1647684 spleen SVCV treatment 0.0253 SRR1028003 head normal 0.0247437 SRR1565817 brain normal 0.024612099999999998 SRR1565813 brain normal 0.024392700000000003 SRR1565809 brain normal 0.0224922 SRR1565819 brain normal 0.0146031 SRR1565815 brain normal 0.00639643 SRR1565805 brain normal 0.00566164