sample tissue condition fpkm SRR748489 egg normal 60.0483 SRR886455 128 cell 4-thio-UTP metabolic labeling 29.3911 SRR886456 256 cell 4-thio-UTP metabolic labeling 28.0079 SRR886457 512 cell 4-thio-UTP metabolic labeling 24.5481 ERR023143 swim bladder normal 16.5867 SRR1299127 caudal fin Two days time after treatment 13.8134 SRR1299129 caudal fin Seven days time after treatment 13.3925 SRR1708345 embryo SIBAS 12.2954 SRR748490 1 kcell normal 12.1103 SRR1299125 caudal fin Half day time after treatment 10.9887 SRR1569491 embryo normal 10.6774 SRR1299128 caudal fin Three days time after treatment 10.5227 ERR023146 head kidney normal 10.467 SRR1569495 embryo normal 10.2154 SRR527835 tail normal 10.1691 SRR527844 24hpf normal 9.84777 SRR535978 larvae normal 9.82713 SRR514028 retina control morpholino 9.80748 SRR1299126 caudal fin One day time after treatment 9.73771 SRR527840 24hpf normal 9.58875 SRR800037 egg normal 9.20999 SRR776510 embryo Salmonella infected and miR-146 knockdown 8.83964 SRR1708346 embryo SIBPS 8.74799 SRR594771 endothelium normal 8.67629 SRR535986 larvae nhsl1b mut 8.62624 SRR776508 embryo miR-146 knockdown 8.44749 SRR1708343 embryo MUTAS 8.29508 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 8.22574 SRR1708344 embryo MUTPS 8.10706 SRR776507 embryo normal 8.047839999999999 SRR658547 6 somite Gata5/6 morphant 8.00963 SRR700534 heart control morpholino 7.46643 SRR514030 retina id2a morpholino 7.209230000000001 SRR1299124 caudal fin Zero day time after treatment 7.00145 SRR658545 6 somite Gata6 morphant 6.85205 SRR658535 bud Gata5 morphant 6.845560000000001 SRR658539 bud Gata5/6 morphant 6.7535 SRR527836 24hpf normal 6.72353 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 6.70942 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 6.7026 SRR630464 5 dpf injected epidermidis 6.674930000000001 SRR658543 6 somite Gata5 morphan 6.53705 SRR1205154 5dpf transgenic sqET20 6.40594 SRR1167752 embryo normal 6.40152 SRR776509 embryo Salmonella infected 6.3566400000000005 SRR1342216 embryo norml 6.3302 SRR658541 6 somite normal 6.32445 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 6.319319999999999 SRR1104058 heart normal 6.272959999999999 SRR658533 bud normal 6.26919 SRR1104059 heart kctd10 mut 6.25022 SRR1004785 larvae normal 6.13736 ERR023144 brain normal 6.058730000000001 SRR630463 5 dpf normal 6.0288699999999995 SRR1005529 embryo control morpholino 5.98681 SRR801554 embryo control morpholino 5.97781 SRR749514 24 hpf normal 5.9326099999999995 SRR700537 heart Gata4 morpholino 5.92325 SRR1342218 embryo marco morpholino 5.80294 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 5.724419999999999 ERR023145 heart normal 5.64795 SRR1039571 gastrointestinal diet 0.1 NPM 5.646669999999999 ERR594418 retina transgenic flk1 and develop tumors 5.57658 SRR801555 embryo RPS19 morpholino 5.53833 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 5.51411 SRR516122 skin male and 3.5 year 5.40177 SRR594769 blood normal 5.33856 SRR658537 bud Gata6 morphant 5.3222 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 5.20144 SRR749515 24 hpf eif3ha morphant 5.19038 SRR1004786 larvae control morpholino 5.14085 SRR1167756 embryo mpeg1 morpholino 5.05339 SRR1167763 embryo ptpn6 morpholino and bacterial infection 5.04868 SRR1291417 5 dpi injected marinum 5.03991 SRR1167757 embryo mpeg1 morpholino and bacterial infection 4.99546 SRR1562529 intestine and pancreas normal 4.98426 SRR748488 sperm normal 4.8724300000000005 SRR1167753 embryo bacterial infection 4.86229 SRR1523211 embryo control morpholino 4.839180000000001 SRR797914 embryo pbx2/4-MO 4.82519 SRR1205160 5dpf transgenic sqET20 and GFP+ 4.81388 SRR797917 embryo pbx2/4-MO and prdm1-/- 4.71777 SRR535926 larvae normal 4.67917 SRR801556 embryo RPS19 and p53 morpholino 4.6638 ERR594417 retina normal 4.66046 SRR800043 sphere stage normal 4.64204 SRR1562528 eye normal 4.61908 SRR516121 skin male and 3.5 year 4.615069999999999 SRR1035981 13 hpf rx3+/+ or rx3+/- 4.59143 SRR1004788 larvae impdh1b morpholino 4.5718 SRR1342217 embryo infection with Mycobacterium marinum 4.483230000000001 SRR1523214 embryo glut12 morpholino 4.46494 SRR797911 embryo prdm1-/- 4.45823 SRR1647683 spleen SVCV treatment 4.389880000000001 SRR535943 larvae vangl mut 4.38784 SRR800049 sphere stage control treatment 4.37418 SRR797908 embryo normal 4.3716800000000005 SRR527833 5 dpf normal 4.29438 SRR038627 embryo control morpholino 4.281219999999999 SRR527832 16-36 hpf normal 4.21421 SRR1005530 embryo RPL11 morpholino 4.2081599999999995 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 4.08614 ERR594416 retina transgenic flk1 4.08408 SRR1021213 sphere stage normal 4.0185699999999995 SRR1291414 5 dpi normal 4.00021 SRR516124 skin male and 3.5 year 3.972 SRR535890 larvae normal 3.8910199999999997 SRR942769 embryo myd88+/+ 3.8813199999999997 SRR942764 embryo myd88-/- 3.84085 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 3.80036 SRR038625 embryo traf6 morpholino 3.7929 SRR065197 3 dpf U1C knockout 3.76557 SRR1035978 13 hpf rx3-/- 3.71846 SRR748491 germ ring normal 3.7001199999999996 SRR610742 3 dpf express NICD 3.62725 SRR831692 embryo normal 3.61122 SRR1188160 embryo Insulin 4 hpi 3.57045 SRR038626 embryo control morpholino and bacterial infection 3.5665400000000003 SRR038624 embryo traf6 morpholino and bacterial infection 3.50661 SRR519717 2 dpf FETOH treatment 3.50315 SRR1028002 head normal 3.45401 SRR535913 larvae krox mut 3.4151 SRR592698 pineal gland normal 3.33695 SRR1021215 sphere stage Mzeomesa 3.3158199999999995 SRR800046 sphere stage 5azaCyD treatment 3.2829699999999997 SRR535848 larvae hoxb1b mut 3.27145 SRR516133 skin male and 5 month 3.22091 SRR1188152 embryo Insulin 0.5 hpi 3.21867 SRR535850 larvae hoxb1b mut 3.21509 SRR1167762 embryo ptpn6 morpholino 3.21314 SRR516123 skin male and 3.5 year 3.18915 SRR1562533 testis normal 3.16826 SRR516126 skin male and 5 month 3.16647 SRR1647682 spleen normal 3.15794 SRR1188148 embryo Control PBS 0.5 hpi 3.12982 SRR610740 3 dpf normal 3.12836 SRR535852 larvae hoxb1b mut 3.12091 SRR610741 3 dpf express Ras 3.11127 SRR1039573 gastrointestinal diet 0.75 NPM 3.10921 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 3.09282 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.0787400000000003 SRR1004787 larvae impdh1a morpholino 3.076 SRR1035984 13 hpf normal 3.07436 SRR065196 3 dpf normal 3.0566 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 3.05377 SRR633550 larvae exposed to hypoxia stress 3.01179 SRR1565817 brain normal 2.97951 SRR535851 larvae normal 2.9734700000000003 SRR592699 pineal gland normal 2.96976 SRR519737 2 dpf VD3 treatment 2.9533 SRR1028003 head normal 2.93762 SRR516125 skin male and 3.5 year 2.92672 SRR1004789 larvae impdh2 morpholino 2.9236 SRR535847 larvae normal 2.8724 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2.87174 SRR516127 skin male and 5 month 2.82647 SRR516129 skin male and 5 month 2.8098400000000003 SRR1565815 brain normal 2.78533 SRR1565813 brain normal 2.7676 SRR1647684 spleen SVCV treatment 2.76673 SRR535849 larvae normal 2.74249 SRR1565819 brain normal 2.7406900000000003 SRR941749 anterior pectoral fin normal 2.72914 SRR1028004 head normal 2.71485 SRR1565809 brain normal 2.71481 SRR1534349 larvae DMSO vehicle 2.69212 SRR1565807 brain normal 2.6825099999999997 SRR516128 skin male and 5 month 2.64394 SRR1647679 head kidney normal 2.63403 SRR633516 larvae normal 2.61075 SRR1565805 brain normal 2.56517 SRR1647680 head kidney SVCV treatment 2.54718 SRR516131 skin male and 5 month 2.50372 SRR1048059 pineal gland light 2.46695 SRR1562532 spleen normal 2.45965 SRR516130 skin male and 5 month 2.4421 SRR592700 pineal gland normal 2.43014 SRR1534350 larvae 5 ug/l BDE47 treatment 2.37413 SRR592703 pineal gland normal 2.35569 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.31891 SRR1565811 brain normal 2.2965 SRR1188156 embryo Control PBS 4 hpi 2.28068 SRR1647681 head kidney SVCV treatment 2.25632 SRR592702 pineal gland normal 2.24532 SRR592701 pineal gland normal 2.19834 SRR726540 5 dpf normal 2.1636599999999997 SRR527834 head normal 2.1253599999999997 SRR516134 skin male and 5 month 2.11751 SRR1035237 liver transgenic UHRF1 2.08764 SRR891511 brain normal 1.93795 SRR633544 larvae exposed to cold stress 1.89193 SRR941753 posterior pectoral fin normal 1.8890200000000001 SRR519722 4 dpf FETOH treatment 1.76312 SRR726541 5 dpf infection with Mycobacterium marinum 1.7410900000000002 SRR1048061 pineal gland dark 1.6585 SRR519742 4 dpf VD3 treatment 1.65363 SRR519752 7 dpf VD3 treatment 1.58178 SRR519747 6 dpf VD3 treatment 1.5179200000000002 SRR1534351 larvae 500 ug/l BDE47 treatment 1.50155 SRR519727 6 dpf FETOH treatment 1.49161 SRR1562531 muscle normal 1.45671 SRR726542 5 dpf infection with control 1.44119 SRR516135 skin male and 5 month 1.41468 SRR1035239 liver transgenic mCherry control 1.39447 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.38768 SRR519732 7 dpf FETOH treatment 1.38022 SRR891512 blood normal 1.3619999999999999 SRR516132 skin male and 5 month 1.21095 SRR891495 heart normal 1.1030200000000001 SRR891510 muscle normal 1.0480200000000002 SRR800045 muscle normal 0.9890459999999999 SRR1562530 liver normal 0.8990440000000001 SRR891504 liver normal 0.394298 SRR372793 shield normal 0.017085 SRR372800 2 dpf normal 0.0102395 SRR372791 dome normal 0.00736158