sample tissue condition fpkm SRR1299127 caudal fin Two days time after treatment 92.7028 SRR1299126 caudal fin One day time after treatment 82.5209 SRR1299128 caudal fin Three days time after treatment 62.7122 SRR1299129 caudal fin Seven days time after treatment 61.3021 SRR1299124 caudal fin Zero day time after treatment 57.0388 SRR1299125 caudal fin Half day time after treatment 56.2067 SRR516123 skin male and 3.5 year 45.4675 SRR516124 skin male and 3.5 year 41.0438 SRR516121 skin male and 3.5 year 38.049 SRR941749 anterior pectoral fin normal 32.7973 SRR516125 skin male and 3.5 year 29.7205 SRR941753 posterior pectoral fin normal 26.3571 SRR516122 skin male and 3.5 year 22.0916 SRR516129 skin male and 5 month 20.7298 SRR516133 skin male and 5 month 17.4028 ERR023146 head kidney normal 16.7538 SRR516128 skin male and 5 month 16.6704 SRR516134 skin male and 5 month 12.5954 SRR516126 skin male and 5 month 12.2263 SRR516131 skin male and 5 month 11.0303 SRR1562528 eye normal 10.5427 SRR516135 skin male and 5 month 9.07733 SRR516130 skin male and 5 month 8.72052 SRR516127 skin male and 5 month 7.654610000000001 SRR516132 skin male and 5 month 7.50482 SRR1562531 muscle normal 5.43671 ERR023145 heart normal 4.65614 SRR1562529 intestine and pancreas normal 4.51883 SRR891512 blood normal 4.15434 ERR023143 swim bladder normal 4.14849 SRR527834 head normal 4.126469999999999 SRR1647684 spleen SVCV treatment 3.5482099999999996 SRR1647683 spleen SVCV treatment 3.1306599999999998 SRR1647681 head kidney SVCV treatment 3.0528 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.79488 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.7506 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.12475 SRR1562533 testis normal 2.1036200000000003 ERR023144 brain normal 1.9650900000000002 SRR700534 heart control morpholino 1.8864900000000002 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.58354 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.56444 SRR630464 5 dpf injected epidermidis 1.5292700000000001 SRR1708346 embryo SIBPS 1.4794100000000001 SRR630463 5 dpf normal 1.4615200000000002 SRR1205154 5dpf transgenic sqET20 1.41929 SRR1647682 spleen normal 1.41221 SRR1534349 larvae DMSO vehicle 1.3955 SRR1534350 larvae 5 ug/l BDE47 treatment 1.3946399999999999 SRR1647680 head kidney SVCV treatment 1.3606 SRR527835 tail normal 1.3580299999999998 SRR1534351 larvae 500 ug/l BDE47 treatment 1.3445 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.30387 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.29931 SRR1039573 gastrointestinal diet 0.75 NPM 1.2508 SRR1708344 embryo MUTPS 1.24401 SRR535986 larvae nhsl1b mut 1.17413 SRR1647679 head kidney normal 1.16361 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.11402 SRR700537 heart Gata4 morpholino 1.03377 SRR1039571 gastrointestinal diet 0.1 NPM 1.03282 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.00479 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.981607 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.948943 SRR1167756 embryo mpeg1 morpholino 0.92842 SRR776507 embryo normal 0.911575 SRR1562532 spleen normal 0.897647 SRR1167752 embryo normal 0.890143 SRR1167753 embryo bacterial infection 0.780319 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.752505 SRR594771 endothelium normal 0.739136 SRR535847 larvae normal 0.734111 SRR1523214 embryo glut12 morpholino 0.721627 SRR1708345 embryo SIBAS 0.704327 SRR1291417 5 dpi injected marinum 0.6983600000000001 SRR1342217 embryo infection with Mycobacterium marinum 0.660688 SRR1028003 head normal 0.642138 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.625679 SRR942764 embryo myd88-/- 0.624969 SRR535852 larvae hoxb1b mut 0.60901 SRR1342216 embryo norml 0.608538 SRR1342218 embryo marco morpholino 0.604341 SRR535978 larvae normal 0.591587 SRR1188152 embryo Insulin 0.5 hpi 0.58108 SRR748488 sperm normal 0.572499 SRR1291414 5 dpi normal 0.562447 ERR594418 retina transgenic flk1 and develop tumors 0.523509 SRR1167762 embryo ptpn6 morpholino 0.523304 SRR1188156 embryo Control PBS 4 hpi 0.523208 SRR1523211 embryo control morpholino 0.5093989999999999 SRR592699 pineal gland normal 0.500472 SRR610742 3 dpf express NICD 0.49957399999999996 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.467373 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.449334 SRR535851 larvae normal 0.43916099999999997 SRR594769 blood normal 0.426101 SRR1028004 head normal 0.42071099999999995 SRR1048059 pineal gland light 0.413062 SRR749515 24 hpf eif3ha morphant 0.403487 SRR592701 pineal gland normal 0.39252600000000004 SRR942769 embryo myd88+/+ 0.390417 SRR592698 pineal gland normal 0.38813400000000003 SRR1048061 pineal gland dark 0.385044 SRR633550 larvae exposed to hypoxia stress 0.375301 SRR592702 pineal gland normal 0.363989 SRR1028002 head normal 0.361148 SRR038627 embryo control morpholino 0.351377 SRR776508 embryo miR-146 knockdown 0.343893 SRR519747 6 dpf VD3 treatment 0.331398 SRR065197 3 dpf U1C knockout 0.313347 SRR519752 7 dpf VD3 treatment 0.312607 ERR594416 retina transgenic flk1 0.304751 SRR519727 6 dpf FETOH treatment 0.30428099999999997 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.29035500000000003 SRR519732 7 dpf FETOH treatment 0.286172 SRR831692 embryo normal 0.280594 SRR801555 embryo RPS19 morpholino 0.253646 SRR633516 larvae normal 0.253429 SRR1188148 embryo Control PBS 0.5 hpi 0.25202800000000003 SRR658543 6 somite Gata5 morphan 0.24361100000000002 SRR1104059 heart kctd10 mut 0.22962 SRR1005529 embryo control morpholino 0.228609 SRR801554 embryo control morpholino 0.228266 SRR776509 embryo Salmonella infected 0.225477 SRR1035237 liver transgenic UHRF1 0.218268 SRR065196 3 dpf normal 0.21288800000000002 SRR1565807 brain normal 0.212205 SRR1035239 liver transgenic mCherry control 0.200743 SRR1188160 embryo Insulin 4 hpi 0.182893 SRR519742 4 dpf VD3 treatment 0.18093800000000002 SRR1565817 brain normal 0.18007 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.17393499999999998 SRR1004787 larvae impdh1a morpholino 0.170932 SRR1565805 brain normal 0.163872 SRR1021215 sphere stage Mzeomesa 0.1599 SRR1004786 larvae control morpholino 0.15538 SRR527840 24hpf normal 0.15145999999999998 SRR535913 larvae krox mut 0.151252 SRR1565811 brain normal 0.15108 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.150776 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.148742 SRR519717 2 dpf FETOH treatment 0.148397 SRR519722 4 dpf FETOH treatment 0.14743399999999998 SRR535926 larvae normal 0.144647 SRR1104058 heart normal 0.13868699999999998 SRR1708343 embryo MUTAS 0.131261 SRR658541 6 somite normal 0.119931 SRR1565815 brain normal 0.118744 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.11561800000000001 SRR748491 germ ring normal 0.111858 SRR658545 6 somite Gata6 morphant 0.111697 SRR535943 larvae vangl mut 0.104451 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.100694 SRR527844 24hpf normal 0.0987813 SRR797914 embryo pbx2/4-MO 0.0956837 SRR1565809 brain normal 0.0860106 SRR592703 pineal gland normal 0.08567480000000001 SRR797908 embryo normal 0.0790375 SRR1004785 larvae normal 0.07870830000000001 SRR1005530 embryo RPL11 morpholino 0.0764092 SRR1004789 larvae impdh2 morpholino 0.0706482 SRR535848 larvae hoxb1b mut 0.0694386 SRR748490 1 kcell normal 0.06640599999999999 ERR594417 retina normal 0.056805499999999995 SRR1569491 embryo normal 0.0564034 SRR527833 5 dpf normal 0.05384019999999999 SRR1565819 brain normal 0.050729500000000004 SRR527836 24hpf normal 0.049629400000000004 SRR800037 egg normal 0.0492301 SRR1565813 brain normal 0.04874969999999999 SRR527832 16-36 hpf normal 0.045036400000000004 SRR797911 embryo prdm1-/- 0.038406300000000004 SRR1021213 sphere stage normal 0.0369582 SRR658535 bud Gata5 morphant 0.0343292 SRR748489 egg normal 0.0313682 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.026394400000000002 SRR519737 2 dpf VD3 treatment 0.0240697 SRR658539 bud Gata5/6 morphant 0.021911700000000003 SRR633544 larvae exposed to cold stress 0.016212999999999998 SRR1569495 embryo normal 0.014728999999999999 SRR1035978 13 hpf rx3-/- 0.014518000000000001 SRR514030 retina id2a morpholino 0.014001300000000001 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.0122852 SRR749514 24 hpf normal 0.0114005 SRR535849 larvae normal 0.00685119 SRR726542 5 dpf infection with control 0.000780377 SRR726541 5 dpf infection with Mycobacterium marinum 0.000666901 SRR592700 pineal gland normal 0.000557458 SRR800043 sphere stage normal 0.00011386 SRR535890 larvae normal 8.42827e-05 SRR038624 embryo traf6 morpholino and bacterial infection 7.31486e-05 SRR1035984 13 hpf normal 6.899159999999999e-05 SRR658547 6 somite Gata5/6 morphant 3.0766300000000004e-05 SRR038625 embryo traf6 morpholino 1.4333299999999999e-05