sample tissue condition fpkm SRR941749 anterior pectoral fin normal 34.524 SRR941753 posterior pectoral fin normal 30.1915 SRR592702 pineal gland normal 24.936 SRR1562529 intestine and pancreas normal 22.8878 SRR1647683 spleen SVCV treatment 17.8377 SRR800037 egg normal 16.2009 SRR1021215 sphere stage Mzeomesa 15.7729 SRR1039571 gastrointestinal diet 0.1 NPM 14.8944 SRR1039573 gastrointestinal diet 0.75 NPM 14.7834 SRR1021213 sphere stage normal 14.3642 SRR1647680 head kidney SVCV treatment 13.9048 SRR1647682 spleen normal 13.800999999999998 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 12.9016 SRR516121 skin male and 3.5 year 12.732000000000001 ERR023143 swim bladder normal 12.2873 SRR1205160 5dpf transgenic sqET20 and GFP+ 12.0462 SRR516123 skin male and 3.5 year 11.8529 SRR1647681 head kidney SVCV treatment 11.8522 SRR516122 skin male and 3.5 year 11.7807 SRR527835 tail normal 11.0959 SRR1647684 spleen SVCV treatment 11.0176 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 10.9787 SRR516133 skin male and 5 month 10.7181 SRR527834 head normal 10.6617 SRR527833 5 dpf normal 10.6088 SRR800043 sphere stage normal 9.997489999999999 ERR023146 head kidney normal 9.94323 SRR658535 bud Gata5 morphant 9.832310000000001 SRR658539 bud Gata5/6 morphant 9.72832 SRR372791 dome normal 9.47455 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 9.4686 SRR1647679 head kidney normal 9.33152 SRR891495 heart normal 9.137939999999999 SRR1028002 head normal 9.00357 SRR658533 bud normal 8.98236 SRR516125 skin male and 3.5 year 8.593 SRR891512 blood normal 8.189039999999999 SRR891504 liver normal 7.74937 SRR658543 6 somite Gata5 morphan 7.5117199999999995 SRR1035978 13 hpf rx3-/- 7.39871 SRR658545 6 somite Gata6 morphant 7.264660000000001 SRR1104059 heart kctd10 mut 7.25795 SRR516129 skin male and 5 month 7.23654 SRR633516 larvae normal 7.20298 SRR372787 2-4 cell normal 7.071000000000001 SRR748490 1 kcell normal 6.9271199999999995 SRR700537 heart Gata4 morpholino 6.909739999999999 SRR658547 6 somite Gata5/6 morphant 6.82066 SRR633550 larvae exposed to hypoxia stress 6.7686 SRR1104058 heart normal 6.72077 SRR372789 1K cell normal 6.69808 SRR1049814 256 cell normal 6.53851 SRR1621206 embryo normal 6.4919 SRR726542 5 dpf infection with control 6.44567 SRR1048061 pineal gland dark 6.43121 SRR592701 pineal gland normal 6.43013 SRR1035981 13 hpf rx3+/+ or rx3+/- 6.39278 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 6.3265199999999995 SRR065197 3 dpf U1C knockout 6.2485 SRR516127 skin male and 5 month 6.12676 SRR372802 5 dpf normal 6.11866 SRR700534 heart control morpholino 6.10195 SRR800046 sphere stage 5azaCyD treatment 6.097980000000001 SRR658541 6 somite normal 5.87675 SRR1048059 pineal gland light 5.85891 SRR1565809 brain normal 5.81576 SRR1205154 5dpf transgenic sqET20 5.784 SRR1028004 head normal 5.71635 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 5.63971 SRR658537 bud Gata6 morphant 5.615419999999999 SRR1523214 embryo glut12 morpholino 5.42657 SRR800045 muscle normal 5.38969 SRR633544 larvae exposed to cold stress 5.27341 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 5.2046 SRR592703 pineal gland normal 5.19297 SRR1188148 embryo Control PBS 0.5 hpi 5.14799 SRR516128 skin male and 5 month 5.12385 SRR592700 pineal gland normal 4.94563 SRR1035984 13 hpf normal 4.82308 SRR1562530 liver normal 4.80037 SRR1188152 embryo Insulin 0.5 hpi 4.7781400000000005 SRR749514 24 hpf normal 4.75242 SRR1523211 embryo control morpholino 4.68187 SRR1188156 embryo Control PBS 4 hpi 4.6220300000000005 SRR800049 sphere stage control treatment 4.621 SRR1565811 brain normal 4.59513 SRR749515 24 hpf eif3ha morphant 4.37202 SRR942764 embryo myd88-/- 4.32391 SRR726540 5 dpf normal 4.32226 ERR594418 retina transgenic flk1 and develop tumors 4.2766 SRR038627 embryo control morpholino 4.27606 SRR516135 skin male and 5 month 4.20874 SRR1004788 larvae impdh1b morpholino 4.05818 SRR1565805 brain normal 4.01875 SRR1004789 larvae impdh2 morpholino 4.01851 SRR748488 sperm normal 3.9575699999999996 SRR776508 embryo miR-146 knockdown 3.94135 SRR535850 larvae hoxb1b mut 3.90204 SRR516131 skin male and 5 month 3.83975 SRR1167756 embryo mpeg1 morpholino 3.8379300000000005 SRR1035239 liver transgenic mCherry control 3.77675 SRR535848 larvae hoxb1b mut 3.71794 SRR797917 embryo pbx2/4-MO and prdm1-/- 3.67635 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 3.6354800000000003 SRR610740 3 dpf normal 3.61701 SRR1291417 5 dpi injected marinum 3.5878099999999997 ERR594416 retina transgenic flk1 3.56987 SRR535851 larvae normal 3.56529 SRR535847 larvae normal 3.55415 SRR516134 skin male and 5 month 3.54633 SRR726541 5 dpf infection with Mycobacterium marinum 3.5009699999999997 SRR797911 embryo prdm1-/- 3.4897 SRR1565819 brain normal 3.46539 SRR1534350 larvae 5 ug/l BDE47 treatment 3.4361699999999997 SRR886455 128 cell 4-thio-UTP metabolic labeling 3.4353300000000004 SRR516126 skin male and 5 month 3.3946 SRR535849 larvae normal 3.39129 SRR372796 bud normal 3.3619 SRR1562531 muscle normal 3.3355099999999998 SRR1188160 embryo Insulin 4 hpi 3.3269 SRR514030 retina id2a morpholino 3.30639 SRR748491 germ ring normal 3.27999 SRR1004785 larvae normal 3.2671799999999998 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.2307900000000003 SRR610742 3 dpf express NICD 3.18492 ERR594417 retina normal 3.17501 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 3.16335 SRR1004787 larvae impdh1a morpholino 3.15686 SRR1291414 5 dpi normal 3.1508700000000003 ERR023145 heart normal 3.14827 SRR527832 16-36 hpf normal 3.12017 SRR1534351 larvae 500 ug/l BDE47 treatment 3.11985 SRR1342216 embryo norml 3.0584 SRR776509 embryo Salmonella infected 3.04664 SRR516130 skin male and 5 month 3.00063 SRR797914 embryo pbx2/4-MO 2.9830799999999997 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.92774 ERR023144 brain normal 2.8997599999999997 SRR1565813 brain normal 2.88355 SRR038624 embryo traf6 morpholino and bacterial infection 2.82038 SRR535890 larvae normal 2.81228 SRR516132 skin male and 5 month 2.80336 SRR372793 shield normal 2.79523 SRR372798 28 hpf normal 2.78073 SRR038625 embryo traf6 morpholino 2.76526 SRR630464 5 dpf injected epidermidis 2.7623900000000003 SRR610741 3 dpf express Ras 2.71734 SRR038626 embryo control morpholino and bacterial infection 2.70688 SRR516124 skin male and 3.5 year 2.6661 SRR1167753 embryo bacterial infection 2.65711 SRR1562533 testis normal 2.65488 SRR797908 embryo normal 2.62573 SRR630463 5 dpf normal 2.60851 SRR1565815 brain normal 2.59249 SRR1708343 embryo MUTAS 2.58664 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.5632900000000003 SRR065196 3 dpf normal 2.54136 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.43355 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.39289 SRR1562532 spleen normal 2.3784099999999997 SRR1167752 embryo normal 2.3475599999999996 SRR1569491 embryo normal 2.31812 SRR1299129 caudal fin Seven days time after treatment 2.25182 SRR1004786 larvae control morpholino 2.20051 SRR1534349 larvae DMSO vehicle 2.07627 SRR1565817 brain normal 2.02835 SRR1565807 brain normal 1.99888 SRR592699 pineal gland normal 1.98481 SRR535852 larvae hoxb1b mut 1.96272 SRR594769 blood normal 1.89992 SRR535943 larvae vangl mut 1.8837 SRR1562528 eye normal 1.83014 SRR519732 7 dpf FETOH treatment 1.75095 SRR1342218 embryo marco morpholino 1.74648 SRR372800 2 dpf normal 1.7152599999999998 SRR514028 retina control morpholino 1.70809 SRR594771 endothelium normal 1.70239 SRR592698 pineal gland normal 1.68855 SRR891510 muscle normal 1.61543 SRR1342217 embryo infection with Mycobacterium marinum 1.60209 SRR1299126 caudal fin One day time after treatment 1.5883 SRR535926 larvae normal 1.4358899999999999 SRR535986 larvae nhsl1b mut 1.4300899999999999 SRR1028003 head normal 1.4083 SRR776507 embryo normal 1.3999700000000002 SRR1005529 embryo control morpholino 1.39181 SRR801554 embryo control morpholino 1.38972 SRR1708345 embryo SIBAS 1.3791 SRR1299125 caudal fin Half day time after treatment 1.3576700000000002 SRR831692 embryo normal 1.34622 SRR1299124 caudal fin Zero day time after treatment 1.34461 SRR1648855 brain normal 1.3256 SRR519752 7 dpf VD3 treatment 1.31691 SRR519722 4 dpf FETOH treatment 1.31676 SRR1035237 liver transgenic UHRF1 1.2706899999999999 SRR527840 24hpf normal 1.22974 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.21185 SRR801556 embryo RPS19 and p53 morpholino 1.16622 SRR519737 2 dpf VD3 treatment 1.13927 SRR535978 larvae normal 1.12099 SRR519717 2 dpf FETOH treatment 1.1159700000000001 SRR748489 egg normal 1.1003 SRR1708346 embryo SIBPS 1.09156 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.08054 SRR519747 6 dpf VD3 treatment 1.07467 SRR519727 6 dpf FETOH treatment 1.05695 SRR1708344 embryo MUTPS 1.04225 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.03979 SRR1299128 caudal fin Three days time after treatment 1.00854 SRR519742 4 dpf VD3 treatment 1.00181 SRR1299127 caudal fin Two days time after treatment 0.994511 SRR942769 embryo myd88+/+ 0.9604950000000001 SRR1167762 embryo ptpn6 morpholino 0.923676 SRR801555 embryo RPS19 morpholino 0.920748 SRR1569495 embryo normal 0.888811 SRR891511 brain normal 0.8422709999999999 SRR1005530 embryo RPL11 morpholino 0.812401 SRR535913 larvae krox mut 0.798763 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.767421 SRR957181 heart normal 0.704583 SRR957180 heart 7 days after heart tip amputation 0.669694 SRR527836 24hpf normal 0.6600520000000001 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.639961 SRR1648856 brain normal 0.574998 SRR1648854 brain normal 0.521255 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.291207 SRR527844 24hpf normal 0.186226 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.0222525