sample tissue condition fpkm SRR594771 endothelium normal 4.3979 SRR519737 2 dpf VD3 treatment 2.7639400000000003 SRR519717 2 dpf FETOH treatment 2.70518 SRR1205154 5dpf transgenic sqET20 2.48283 SRR726542 5 dpf infection with control 2.38275 SRR038624 embryo traf6 morpholino and bacterial infection 2.37384 SRR891511 brain normal 2.24822 SRR514030 retina id2a morpholino 2.22654 SRR038627 embryo control morpholino 2.12532 SRR514028 retina control morpholino 2.0133900000000002 SRR726541 5 dpf infection with Mycobacterium marinum 1.9790599999999998 SRR038626 embryo control morpholino and bacterial infection 1.8815099999999998 SRR776508 embryo miR-146 knockdown 1.7937299999999998 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.71523 SRR038625 embryo traf6 morpholino 1.71035 SRR519752 7 dpf VD3 treatment 1.59026 SRR1569495 embryo normal 1.56428 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.55456 SRR633544 larvae exposed to cold stress 1.52542 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.49538 SRR1562529 intestine and pancreas normal 1.42157 SRR519747 6 dpf VD3 treatment 1.40839 SRR519742 4 dpf VD3 treatment 1.37191 SRR519722 4 dpf FETOH treatment 1.3551 SRR1188156 embryo Control PBS 4 hpi 1.31913 SRR519727 6 dpf FETOH treatment 1.29744 SRR519732 7 dpf FETOH treatment 1.2537 SRR726540 5 dpf normal 1.22295 ERR594417 retina normal 1.20202 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.1702700000000001 SRR776509 embryo Salmonella infected 1.16129 SRR1188148 embryo Control PBS 0.5 hpi 1.15947 SRR1188152 embryo Insulin 0.5 hpi 1.1493799999999998 SRR1039573 gastrointestinal diet 0.75 NPM 1.09284 SRR749514 24 hpf normal 1.06294 SRR658541 6 somite normal 1.05752 SRR1291417 5 dpi injected marinum 1.04887 SRR1167756 embryo mpeg1 morpholino 1.01644 SRR1167762 embryo ptpn6 morpholino 1.01415 SRR527832 16-36 hpf normal 1.0117 SRR776507 embryo normal 0.998634 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.9699049999999999 SRR1188160 embryo Insulin 4 hpi 0.961101 SRR658543 6 somite Gata5 morphan 0.949428 ERR594416 retina transgenic flk1 0.9346540000000001 SRR630463 5 dpf normal 0.9220440000000001 SRR535913 larvae krox mut 0.9073319999999999 SRR535926 larvae normal 0.903875 SRR535943 larvae vangl mut 0.8930959999999999 SRR1291414 5 dpi normal 0.876084 SRR658533 bud normal 0.86611 SRR594769 blood normal 0.8546030000000001 SRR658547 6 somite Gata5/6 morphant 0.852147 SRR630464 5 dpf injected epidermidis 0.827103 SRR658545 6 somite Gata6 morphant 0.8225809999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.818782 SRR633516 larvae normal 0.8169390000000001 SRR749515 24 hpf eif3ha morphant 0.8001729999999999 SRR942764 embryo myd88-/- 0.774752 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.7722640000000001 SRR1039571 gastrointestinal diet 0.1 NPM 0.763463 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.762251 SRR797911 embryo prdm1-/- 0.750896 ERR023144 brain normal 0.7475689999999999 SRR527833 5 dpf normal 0.746038 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.730967 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.720771 SRR658539 bud Gata5/6 morphant 0.7128680000000001 SRR1523211 embryo control morpholino 0.70012 SRR535849 larvae normal 0.69971 SRR535890 larvae normal 0.698855 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.687623 SRR797914 embryo pbx2/4-MO 0.677873 SRR658535 bud Gata5 morphant 0.668605 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.666618 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.664425 SRR658537 bud Gata6 morphant 0.6554770000000001 SRR1523214 embryo glut12 morpholino 0.64151 SRR065197 3 dpf U1C knockout 0.6367689999999999 SRR633550 larvae exposed to hypoxia stress 0.6359319999999999 SRR527836 24hpf normal 0.628254 SRR1167753 embryo bacterial infection 0.624165 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.617867 SRR942769 embryo myd88+/+ 0.617527 SRR797908 embryo normal 0.6019100000000001 SRR516132 skin male and 5 month 0.582808 SRR065196 3 dpf normal 0.562248 ERR594418 retina transgenic flk1 and develop tumors 0.562221 SRR1342218 embryo marco morpholino 0.555546 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.548284 SRR891495 heart normal 0.541534 SRR535848 larvae hoxb1b mut 0.536253 SRR700537 heart Gata4 morpholino 0.5337270000000001 SRR535847 larvae normal 0.527594 SRR1167752 embryo normal 0.526542 SRR831692 embryo normal 0.5247430000000001 SRR610742 3 dpf express NICD 0.515494 SRR1342217 embryo infection with Mycobacterium marinum 0.514313 SRR610740 3 dpf normal 0.508228 SRR1004788 larvae impdh1b morpholino 0.49216899999999997 SRR1104058 heart normal 0.464783 SRR535851 larvae normal 0.451284 SRR1005530 embryo RPL11 morpholino 0.438507 SRR527840 24hpf normal 0.437787 SRR1035237 liver transgenic UHRF1 0.42045 SRR527844 24hpf normal 0.41463999999999995 SRR1569491 embryo normal 0.40313899999999997 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.399055 SRR1342216 embryo norml 0.37788 SRR1708345 embryo SIBAS 0.377347 SRR1104059 heart kctd10 mut 0.374986 SRR1708343 embryo MUTAS 0.372584 SRR891510 muscle normal 0.35489699999999996 SRR700534 heart control morpholino 0.352458 SRR527834 head normal 0.337156 SRR535850 larvae hoxb1b mut 0.32214 SRR535852 larvae hoxb1b mut 0.32061100000000003 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.31258600000000003 SRR527835 tail normal 0.30791399999999997 SRR1035978 13 hpf rx3-/- 0.305483 SRR1534349 larvae DMSO vehicle 0.290126 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.283582 SRR1534351 larvae 500 ug/l BDE47 treatment 0.280442 SRR801556 embryo RPS19 and p53 morpholino 0.274461 SRR748489 egg normal 0.267374 SRR1004789 larvae impdh2 morpholino 0.25454099999999996 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.252643 SRR516129 skin male and 5 month 0.248302 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.245698 SRR610741 3 dpf express Ras 0.234395 SRR535986 larvae nhsl1b mut 0.230317 SRR1562528 eye normal 0.23001300000000002 SRR516135 skin male and 5 month 0.22627199999999997 SRR1708344 embryo MUTPS 0.209429 SRR1004786 larvae control morpholino 0.20737199999999997 SRR891504 liver normal 0.205421 SRR516121 skin male and 3.5 year 0.20231300000000002 SRR1647683 spleen SVCV treatment 0.19515 SRR516127 skin male and 5 month 0.194569 SRR891512 blood normal 0.189946 SRR535978 larvae normal 0.189906 SRR1708346 embryo SIBPS 0.184845 SRR1562533 testis normal 0.184408 SRR1647682 spleen normal 0.17620999999999998 SRR1028003 head normal 0.174045 ERR023146 head kidney normal 0.171964 SRR1021213 sphere stage normal 0.170432 SRR1021215 sphere stage Mzeomesa 0.163273 SRR592698 pineal gland normal 0.152376 SRR592699 pineal gland normal 0.151765 SRR516131 skin male and 5 month 0.148697 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.145598 SRR748488 sperm normal 0.145248 ERR023143 swim bladder normal 0.141825 SRR1048059 pineal gland light 0.14169500000000002 SRR1028002 head normal 0.14016099999999998 SRR592703 pineal gland normal 0.138537 SRR1035239 liver transgenic mCherry control 0.138407 ERR023145 heart normal 0.12600899999999998 SRR748490 1 kcell normal 0.123374 SRR1028004 head normal 0.122867 SRR748491 germ ring normal 0.12281700000000001 SRR1299128 caudal fin Three days time after treatment 0.11928299999999999 SRR592702 pineal gland normal 0.114871 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.11225299999999999 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.11116199999999998 SRR516122 skin male and 3.5 year 0.11099500000000001 SRR1004787 larvae impdh1a morpholino 0.11030799999999999 SRR1048061 pineal gland dark 0.109391 SRR1562532 spleen normal 0.108895 SRR1004785 larvae normal 0.10575599999999999 SRR516126 skin male and 5 month 0.10434600000000001 SRR1647681 head kidney SVCV treatment 0.103094 SRR1534350 larvae 5 ug/l BDE47 treatment 0.0986058 SRR941749 anterior pectoral fin normal 0.0966658 SRR516124 skin male and 3.5 year 0.09581410000000001 SRR592701 pineal gland normal 0.0948457 SRR516123 skin male and 3.5 year 0.0923201 SRR1562531 muscle normal 0.0917159 SRR1299127 caudal fin Two days time after treatment 0.0914429 SRR1647679 head kidney normal 0.0902044 SRR1647680 head kidney SVCV treatment 0.0855972 SRR516128 skin male and 5 month 0.07927310000000001 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.0736778 SRR1565817 brain normal 0.0678193 SRR941753 posterior pectoral fin normal 0.0675755 SRR592700 pineal gland normal 0.0663592 SRR1562530 liver normal 0.0631516 SRR1565819 brain normal 0.06189019999999999 SRR800045 muscle normal 0.0611684 SRR516130 skin male and 5 month 0.0609393 SRR1565809 brain normal 0.0585319 SRR1299124 caudal fin Zero day time after treatment 0.0580538 SRR1299129 caudal fin Seven days time after treatment 0.057233400000000004 SRR516125 skin male and 3.5 year 0.055250400000000005 SRR516133 skin male and 5 month 0.055092499999999996 SRR801555 embryo RPS19 morpholino 0.052612400000000004 SRR1005529 embryo control morpholino 0.048987 SRR801554 embryo control morpholino 0.04891330000000001 SRR516134 skin male and 5 month 0.0454291 SRR1035984 13 hpf normal 0.0447527 SRR1565811 brain normal 0.040898000000000004 SRR1647684 spleen SVCV treatment 0.0377051 SRR1565815 brain normal 0.0367231 SRR957180 heart 7 days after heart tip amputation 0.0341644 SRR1565807 brain normal 0.0337765 SRR1565805 brain normal 0.019778200000000003 SRR1299125 caudal fin Half day time after treatment 0.018591999999999997 SRR1565813 brain normal 0.0173899 SRR372800 2 dpf normal 0.0164063 SRR1299126 caudal fin One day time after treatment 0.0163495 SRR372791 dome normal 0.015885399999999997 SRR372798 28 hpf normal 0.0116514 SRR1648855 brain normal 0.011537299999999999 SRR372796 bud normal 0.00868499 SRR1648854 brain normal 0.00730465 SRR372789 1K cell normal 0.00670036 SRR957181 heart normal 0.00648386 SRR800037 egg normal 0.00427699 SRR372793 shield normal 0.00421816 SRR372802 5 dpf normal 0.00353246 SRR1648856 brain normal 0.00333442 SRR1049814 256 cell normal 0.00199401 SRR1621206 embryo normal 0.00183872