sample tissue condition fpkm SRR941753 posterior pectoral fin normal 17.3028 SRR1205160 5dpf transgenic sqET20 and GFP+ 11.1341 SRR941749 anterior pectoral fin normal 10.9171 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 9.83263 SRR1028002 head normal 9.3668 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 9.07953 SRR516129 skin male and 5 month 8.72898 SRR1039573 gastrointestinal diet 0.75 NPM 8.58038 SRR1534351 larvae 500 ug/l BDE47 treatment 8.333860000000001 SRR516122 skin male and 3.5 year 8.30693 SRR516132 skin male and 5 month 8.24955 SRR516127 skin male and 5 month 8.244760000000001 SRR516128 skin male and 5 month 7.7677 SRR516134 skin male and 5 month 7.67859 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.470089999999999 SRR516121 skin male and 3.5 year 7.451389999999999 SRR516125 skin male and 3.5 year 7.2618 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 7.044389999999999 SRR516130 skin male and 5 month 7.001580000000001 SRR1039571 gastrointestinal diet 0.1 NPM 6.64958 SRR1647680 head kidney SVCV treatment 6.32029 SRR527834 head normal 6.23909 SRR1299124 caudal fin Zero day time after treatment 6.22733 SRR1647683 spleen SVCV treatment 5.9900400000000005 SRR1167753 embryo bacterial infection 5.880380000000001 SRR516123 skin male and 3.5 year 5.81232 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 5.71521 SRR519752 7 dpf VD3 treatment 5.66217 SRR1299126 caudal fin One day time after treatment 5.64891 SRR516126 skin male and 5 month 5.47661 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 5.39277 SRR1291417 5 dpi injected marinum 5.31227 SRR594771 endothelium normal 5.29098 SRR592701 pineal gland normal 5.15228 SRR1647684 spleen SVCV treatment 5.12362 SRR1028004 head normal 5.02121 SRR1028003 head normal 4.92276 SRR776509 embryo Salmonella infected 4.63065 SRR516133 skin male and 5 month 4.6247300000000005 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 4.5837699999999995 SRR891512 blood normal 4.54005 SRR519747 6 dpf VD3 treatment 4.27556 SRR1299127 caudal fin Two days time after treatment 4.2278199999999995 SRR1299129 caudal fin Seven days time after treatment 4.21577 SRR1647679 head kidney normal 4.193890000000001 SRR519732 7 dpf FETOH treatment 4.121569999999999 SRR1104059 heart kctd10 mut 4.0095 SRR1562529 intestine and pancreas normal 3.9770800000000004 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.9633199999999995 SRR1299128 caudal fin Three days time after treatment 3.93471 SRR516135 skin male and 5 month 3.8740900000000003 SRR1299125 caudal fin Half day time after treatment 3.83071 SRR592703 pineal gland normal 3.74044 SRR592700 pineal gland normal 3.7153099999999997 SRR519727 6 dpf FETOH treatment 3.70509 SRR1005530 embryo RPL11 morpholino 3.5870800000000003 SRR726540 5 dpf normal 3.57893 ERR023143 swim bladder normal 3.5360400000000003 SRR516124 skin male and 3.5 year 3.48299 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.4167199999999998 SRR726542 5 dpf infection with control 3.4112699999999996 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.3480300000000005 SRR065197 3 dpf U1C knockout 3.3168 SRR1104058 heart normal 3.302 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.0947299999999998 SRR1048061 pineal gland dark 3.0852 SRR372802 5 dpf normal 3.07465 SRR891495 heart normal 3.03852 SRR1647681 head kidney SVCV treatment 2.99362 SRR1562531 muscle normal 2.97341 SRR630464 5 dpf injected epidermidis 2.9661299999999997 SRR527833 5 dpf normal 2.9066799999999997 SRR516131 skin male and 5 month 2.8726 SRR700534 heart control morpholino 2.81469 SRR592699 pineal gland normal 2.81359 SRR610741 3 dpf express Ras 2.78403 SRR1205154 5dpf transgenic sqET20 2.7642599999999997 SRR1647682 spleen normal 2.75944 SRR1534350 larvae 5 ug/l BDE47 treatment 2.74283 SRR610740 3 dpf normal 2.73343 SRR1569491 embryo normal 2.63618 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.62225 SRR1167752 embryo normal 2.58121 SRR1291414 5 dpi normal 2.5009 SRR038627 embryo control morpholino 2.4788 SRR1188148 embryo Control PBS 0.5 hpi 2.4666 SRR633516 larvae normal 2.44762 SRR519722 4 dpf FETOH treatment 2.4008599999999998 ERR023146 head kidney normal 2.3014099999999997 SRR801555 embryo RPS19 morpholino 2.29069 SRR594769 blood normal 2.2757 SRR1523214 embryo glut12 morpholino 2.1577599999999997 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.14957 SRR633550 larvae exposed to hypoxia stress 2.14491 SRR1342217 embryo infection with Mycobacterium marinum 2.14 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.12031 SRR630463 5 dpf normal 2.1202799999999997 SRR800045 muscle normal 2.02672 SRR891510 muscle normal 1.9929599999999998 SRR1035237 liver transgenic UHRF1 1.94347 SRR1562528 eye normal 1.92985 SRR1188160 embryo Insulin 4 hpi 1.8887099999999999 SRR610742 3 dpf express NICD 1.88189 SRR1035239 liver transgenic mCherry control 1.82285 SRR519737 2 dpf VD3 treatment 1.80988 SRR726541 5 dpf infection with Mycobacterium marinum 1.77132 SRR1534349 larvae DMSO vehicle 1.7613900000000002 SRR065196 3 dpf normal 1.74145 SRR700537 heart Gata4 morpholino 1.6783599999999999 SRR1188156 embryo Control PBS 4 hpi 1.67095 SRR519717 2 dpf FETOH treatment 1.66573 SRR519742 4 dpf VD3 treatment 1.4880200000000001 SRR1648855 brain normal 1.4779 SRR942769 embryo myd88+/+ 1.47722 SRR1342216 embryo norml 1.36626 SRR801556 embryo RPS19 and p53 morpholino 1.34485 SRR658545 6 somite Gata6 morphant 1.2995700000000001 SRR1004787 larvae impdh1a morpholino 1.27573 SRR038624 embryo traf6 morpholino and bacterial infection 1.27221 SRR535848 larvae hoxb1b mut 1.27158 SRR527835 tail normal 1.27094 SRR658547 6 somite Gata5/6 morphant 1.2583799999999998 ERR594418 retina transgenic flk1 and develop tumors 1.21131 SRR776508 embryo miR-146 knockdown 1.2091 SRR038626 embryo control morpholino and bacterial infection 1.20129 SRR1342218 embryo marco morpholino 1.20108 SRR658535 bud Gata5 morphant 1.1641700000000001 SRR797914 embryo pbx2/4-MO 1.12998 SRR1621206 embryo normal 1.06256 SRR514028 retina control morpholino 1.01139 SRR1188152 embryo Insulin 0.5 hpi 1.01098 SRR957180 heart 7 days after heart tip amputation 0.975352 SRR1167762 embryo ptpn6 morpholino 0.972907 SRR633544 larvae exposed to cold stress 0.9586879999999999 ERR023144 brain normal 0.9517100000000001 SRR535850 larvae hoxb1b mut 0.929434 SRR372800 2 dpf normal 0.9251870000000001 SRR658539 bud Gata5/6 morphant 0.9233540000000001 SRR797908 embryo normal 0.898639 ERR594416 retina transgenic flk1 0.8890049999999999 SRR1708346 embryo SIBPS 0.8626590000000001 SRR749515 24 hpf eif3ha morphant 0.851857 SRR592702 pineal gland normal 0.843894 SRR1523211 embryo control morpholino 0.828644 SRR372798 28 hpf normal 0.8209 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.82078 SRR535849 larvae normal 0.808552 SRR1004789 larvae impdh2 morpholino 0.788008 SRR1708344 embryo MUTPS 0.7804220000000001 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.713411 SRR658541 6 somite normal 0.707608 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.703729 SRR942764 embryo myd88-/- 0.702468 SRR527840 24hpf normal 0.7012510000000001 SRR038625 embryo traf6 morpholino 0.693746 SRR535852 larvae hoxb1b mut 0.663093 SRR748488 sperm normal 0.661814 SRR658537 bud Gata6 morphant 0.64552 SRR535847 larvae normal 0.62493 SRR658533 bud normal 0.623321 SRR535851 larvae normal 0.610319 SRR957181 heart normal 0.589264 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.577429 SRR1565811 brain normal 0.552281 SRR1565809 brain normal 0.551334 SRR372787 2-4 cell normal 0.550959 SRR1167756 embryo mpeg1 morpholino 0.528884 SRR527832 16-36 hpf normal 0.5284260000000001 SRR1004785 larvae normal 0.511879 SRR749514 24 hpf normal 0.487734 SRR658543 6 somite Gata5 morphan 0.460214 SRR1004786 larvae control morpholino 0.45292299999999996 SRR1049814 256 cell normal 0.45120299999999997 SRR535913 larvae krox mut 0.42662 SRR1562533 testis normal 0.425579 SRR831692 embryo normal 0.416317 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.39675 SRR1708343 embryo MUTAS 0.388117 SRR748490 1 kcell normal 0.380655 SRR1035984 13 hpf normal 0.377562 SRR1004788 larvae impdh1b morpholino 0.37042600000000003 SRR1569495 embryo normal 0.368148 SRR514030 retina id2a morpholino 0.345008 ERR594417 retina normal 0.339991 SRR527836 24hpf normal 0.33505999999999997 SRR891511 brain normal 0.333583 SRR372789 1K cell normal 0.32404299999999997 SRR1565819 brain normal 0.306037 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.295956 SRR1648854 brain normal 0.291219 SRR372796 bud normal 0.27921599999999996 SRR1562530 liver normal 0.25411100000000003 SRR1005529 embryo control morpholino 0.253729 SRR801554 embryo control morpholino 0.253347 SRR1562532 spleen normal 0.24841999999999997 SRR372791 dome normal 0.240094 SRR1565813 brain normal 0.207 SRR1021213 sphere stage normal 0.206364 SRR372793 shield normal 0.206197 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.177335 SRR535890 larvae normal 0.171284 SRR1035978 13 hpf rx3-/- 0.15781900000000001 SRR797911 embryo prdm1-/- 0.15651400000000001 SRR776507 embryo normal 0.156092 SRR1565817 brain normal 0.155168 ERR023145 heart normal 0.138206 SRR1021215 sphere stage Mzeomesa 0.125671 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.08904429999999999 SRR527844 24hpf normal 0.0770194 SRR1565815 brain normal 0.0696734 SRR1648856 brain normal 0.059855700000000005 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.059222699999999996 SRR1565805 brain normal 0.0566396 SRR1048059 pineal gland light 0.049729199999999994 SRR535926 larvae normal 0.0465874 SRR535943 larvae vangl mut 0.0414446 SRR1708345 embryo SIBAS 0.01697 SRR1565807 brain normal 0.00588803