sample tissue condition fpkm SRR1004787 larvae impdh1a morpholino 70.0415 SRR1569491 embryo normal 57.1142 SRR1035984 13 hpf normal 54.0454 SRR1004789 larvae impdh2 morpholino 51.2989 SRR1004788 larvae impdh1b morpholino 49.2293 SRR1035981 13 hpf rx3+/+ or rx3+/- 46.2054 SRR527836 24hpf normal 42.1407 SRR535978 larvae normal 41.5733 SRR1104059 heart kctd10 mut 41.038999999999994 SRR797917 embryo pbx2/4-MO and prdm1-/- 38.0262 SRR1035978 13 hpf rx3-/- 37.3326 SRR1104058 heart normal 37.1155 SRR797914 embryo pbx2/4-MO 36.5845 SRR594769 blood normal 34.929 SRR1004786 larvae control morpholino 34.8643 SRR1569495 embryo normal 32.7437 SRR748488 sperm normal 31.0888 SRR1648856 brain normal 30.1447 SRR797911 embryo prdm1-/- 28.8405 SRR1708343 embryo MUTAS 28.8181 SRR594771 endothelium normal 28.4309 SRR527835 tail normal 28.2041 SRR372798 28 hpf normal 27.8592 SRR1299126 caudal fin One day time after treatment 27.7436 SRR1035237 liver transgenic UHRF1 26.7164 SRR797908 embryo normal 26.4731 SRR372796 bud normal 25.7602 SRR527840 24hpf normal 25.0565 SRR1562533 testis normal 24.0174 SRR372800 2 dpf normal 23.3361 SRR776507 embryo normal 22.9159 SRR658547 6 somite Gata5/6 morphant 22.6746 SRR749515 24 hpf eif3ha morphant 22.3808 SRR748489 egg normal 22.25 SRR776508 embryo miR-146 knockdown 21.8479 SRR749514 24 hpf normal 21.4333 SRR527844 24hpf normal 21.3382 SRR535986 larvae nhsl1b mut 21.28 SRR776510 embryo Salmonella infected and miR-146 knockdown 21.2528 SRR658545 6 somite Gata6 morphant 21.0782 SRR700537 heart Gata4 morpholino 20.7908 SRR1005530 embryo RPL11 morpholino 20.7117 SRR658541 6 somite normal 20.6122 SRR1004785 larvae normal 20.195 SRR801555 embryo RPS19 morpholino 20.0169 SRR1291414 5 dpi normal 19.6874 SRR038625 embryo traf6 morpholino 19.4449 SRR1005529 embryo control morpholino 19.3476 SRR801554 embryo control morpholino 19.3178 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 18.3673 SRR1708345 embryo SIBAS 18.1899 SRR1299125 caudal fin Half day time after treatment 18.074 SRR514028 retina control morpholino 17.7729 SRR527832 16-36 hpf normal 17.7643 SRR658533 bud normal 17.6918 SRR1205154 5dpf transgenic sqET20 16.8898 SRR514030 retina id2a morpholino 15.7139 SRR658543 6 somite Gata5 morphan 15.3192 SRR1205160 5dpf transgenic sqET20 and GFP+ 14.9984 SRR516127 skin male and 5 month 14.6806 SRR957180 heart 7 days after heart tip amputation 14.4419 SRR658535 bud Gata5 morphant 14.4099 SRR1647681 head kidney SVCV treatment 14.3176 SRR801556 embryo RPS19 and p53 morpholino 14.2209 SRR726540 5 dpf normal 14.0319 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 13.5995 SRR1299127 caudal fin Two days time after treatment 13.5094 SRR1708344 embryo MUTPS 13.4466 SRR038624 embryo traf6 morpholino and bacterial infection 13.3335 SRR658539 bud Gata5/6 morphant 13.3289 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 13.2956 SRR1299128 caudal fin Three days time after treatment 13.1045 SRR658537 bud Gata6 morphant 12.8558 SRR516123 skin male and 3.5 year 12.2393 SRR516122 skin male and 3.5 year 12.1761 SRR1188152 embryo Insulin 0.5 hpi 11.9851 SRR1299129 caudal fin Seven days time after treatment 11.9368 SRR1523214 embryo glut12 morpholino 11.6086 SRR1291417 5 dpi injected marinum 11.1734 SRR957181 heart normal 11.1662 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 10.9978 SRR535926 larvae normal 10.3987 SRR1562531 muscle normal 10.128 SRR630464 5 dpf injected epidermidis 10.0479 SRR1565805 brain normal 9.87673 SRR748490 1 kcell normal 9.79952 SRR1565811 brain normal 9.72494 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 9.68445 SRR1647680 head kidney SVCV treatment 9.63608 SRR1647684 spleen SVCV treatment 9.57343 SRR535943 larvae vangl mut 9.48912 SRR038627 embryo control morpholino 8.957410000000001 SRR1035239 liver transgenic mCherry control 8.92998 SRR1342216 embryo norml 8.88955 SRR1565813 brain normal 8.8741 SRR1565807 brain normal 8.871030000000001 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 8.77773 SRR1342218 embryo marco morpholino 8.69316 SRR630463 5 dpf normal 8.585930000000001 SRR1648854 brain normal 8.1975 SRR941753 posterior pectoral fin normal 8.179780000000001 SRR1565815 brain normal 7.956110000000001 SRR038626 embryo control morpholino and bacterial infection 7.9443600000000005 SRR1647682 spleen normal 7.84473 SRR1523211 embryo control morpholino 7.81082 SRR527833 5 dpf normal 7.75818 SRR1188148 embryo Control PBS 0.5 hpi 7.75363 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 7.7272300000000005 SRR1299124 caudal fin Zero day time after treatment 7.72249 SRR527834 head normal 7.65998 SRR535913 larvae krox mut 7.486689999999999 SRR1647679 head kidney normal 7.408689999999999 SRR1648855 brain normal 7.3253699999999995 SRR1708346 embryo SIBPS 7.04205 SRR941749 anterior pectoral fin normal 6.927789999999999 SRR516126 skin male and 5 month 6.893619999999999 SRR1647683 spleen SVCV treatment 6.86609 SRR1565817 brain normal 6.74597 SRR886457 512 cell 4-thio-UTP metabolic labeling 6.71744 SRR726541 5 dpf infection with Mycobacterium marinum 6.56883 SRR726542 5 dpf infection with control 6.50053 SRR516131 skin male and 5 month 6.45345 SRR372787 2-4 cell normal 6.4234 SRR372789 1K cell normal 6.41556 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 6.25799 SRR1167752 embryo normal 6.24057 SRR1565809 brain normal 6.17721 SRR700534 heart control morpholino 6.13616 SRR1565819 brain normal 6.13009 SRR065197 3 dpf U1C knockout 5.92443 SRR1534350 larvae 5 ug/l BDE47 treatment 5.83206 SRR942764 embryo myd88-/- 5.75669 SRR1188160 embryo Insulin 4 hpi 5.62794 ERR023146 head kidney normal 5.607819999999999 ERR594417 retina normal 5.53832 ERR023143 swim bladder normal 5.48762 SRR1534351 larvae 500 ug/l BDE47 treatment 5.48725 SRR776509 embryo Salmonella infected 5.46015 ERR594416 retina transgenic flk1 5.44123 SRR592702 pineal gland normal 5.435630000000001 SRR535851 larvae normal 5.3996900000000005 SRR516134 skin male and 5 month 5.26464 SRR831692 embryo normal 5.14631 SRR1028004 head normal 5.06576 SRR1562528 eye normal 5.04916 SRR592700 pineal gland normal 5.0280000000000005 SRR065196 3 dpf normal 5.02671 SRR1048059 pineal gland light 4.95264 SRR1188156 embryo Control PBS 4 hpi 4.69649 SRR519742 4 dpf VD3 treatment 4.6870199999999995 SRR886455 128 cell 4-thio-UTP metabolic labeling 4.634930000000001 SRR1021215 sphere stage Mzeomesa 4.601719999999999 SRR516130 skin male and 5 month 4.47201 SRR1562529 intestine and pancreas normal 4.458069999999999 SRR610740 3 dpf normal 4.4401 SRR516132 skin male and 5 month 4.35538 SRR372791 dome normal 4.15824 SRR1167762 embryo ptpn6 morpholino 4.05189 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 4.0293 SRR516135 skin male and 5 month 3.89402 SRR748491 germ ring normal 3.80312 SRR519737 2 dpf VD3 treatment 3.7445199999999996 ERR594418 retina transgenic flk1 and develop tumors 3.5889 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.4534199999999995 SRR633544 larvae exposed to cold stress 3.22297 SRR519717 2 dpf FETOH treatment 3.2042599999999997 SRR1562532 spleen normal 3.18905 SRR633516 larvae normal 3.16553 SRR516128 skin male and 5 month 3.13053 SRR1534349 larvae DMSO vehicle 3.0809599999999997 SRR1021213 sphere stage normal 3.08085 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 3.06802 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.9275700000000002 SRR1562530 liver normal 2.8949 ERR023144 brain normal 2.86784 SRR535848 larvae hoxb1b mut 2.85914 SRR535849 larvae normal 2.73366 SRR519752 7 dpf VD3 treatment 2.63452 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.63022 SRR519722 4 dpf FETOH treatment 2.58524 SRR1049814 256 cell normal 2.54661 SRR372793 shield normal 2.47575 SRR516133 skin male and 5 month 2.42715 SRR633550 larvae exposed to hypoxia stress 2.38517 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.38484 SRR535850 larvae hoxb1b mut 2.37935 SRR519747 6 dpf VD3 treatment 2.35237 SRR800043 sphere stage normal 2.3361 SRR592699 pineal gland normal 2.30025 SRR535852 larvae hoxb1b mut 2.16228 SRR519727 6 dpf FETOH treatment 2.09436 SRR1028003 head normal 1.9698799999999999 SRR1039571 gastrointestinal diet 0.1 NPM 1.9603400000000002 SRR1039573 gastrointestinal diet 0.75 NPM 1.91114 SRR516121 skin male and 3.5 year 1.86401 SRR800045 muscle normal 1.8475700000000002 SRR592701 pineal gland normal 1.7787400000000002 SRR1048061 pineal gland dark 1.7426400000000002 SRR891495 heart normal 1.70471 SRR942769 embryo myd88+/+ 1.4708700000000001 SRR519732 7 dpf FETOH treatment 1.46991 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.39893 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.38265 SRR1621206 embryo normal 1.31971 SRR1167753 embryo bacterial infection 0.939688 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.837168 SRR891512 blood normal 0.753358 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.752253 SRR610742 3 dpf express NICD 0.557543 SRR1028002 head normal 0.480434 ERR023145 heart normal 0.475674 SRR516125 skin male and 3.5 year 0.40316399999999997 SRR372802 5 dpf normal 0.351625 SRR800037 egg normal 0.272502 SRR535847 larvae normal 0.0912663 SRR891510 muscle normal 0.0284558 SRR1342217 embryo infection with Mycobacterium marinum 0.0119361 SRR610741 3 dpf express Ras 0.00964789 SRR800046 sphere stage 5azaCyD treatment 0.00513941 SRR1167756 embryo mpeg1 morpholino 0.00402952 SRR535890 larvae normal 0.00191254 SRR891511 brain normal 0.00181235 SRR800049 sphere stage control treatment 0.000890429 SRR516129 skin male and 5 month 0.0007135160000000001