sample tissue condition fpkm SRR516132 skin male and 5 month 18.1491 SRR1299127 caudal fin Two days time after treatment 16.1185 SRR1562529 intestine and pancreas normal 15.2073 SRR1299125 caudal fin Half day time after treatment 14.2217 ERR023144 brain normal 14.1913 SRR1205160 5dpf transgenic sqET20 and GFP+ 13.4303 SRR1299126 caudal fin One day time after treatment 12.7534 SRR1299129 caudal fin Seven days time after treatment 12.7141 SRR1039571 gastrointestinal diet 0.1 NPM 12.2782 SRR1039573 gastrointestinal diet 0.75 NPM 12.0219 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 11.8551 SRR1299124 caudal fin Zero day time after treatment 11.4323 SRR1291417 5 dpi injected marinum 11.3246 SRR1342218 embryo marco morpholino 11.0581 SRR1291414 5 dpi normal 10.0294 SRR630464 5 dpf injected epidermidis 9.80852 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 9.55769 SRR630463 5 dpf normal 9.514619999999999 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 9.28653 SRR1299128 caudal fin Three days time after treatment 9.26876 SRR1167757 embryo mpeg1 morpholino and bacterial infection 9.20732 SRR1167753 embryo bacterial infection 9.08538 SRR535986 larvae nhsl1b mut 9.07142 SRR658541 6 somite normal 8.77641 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 8.75596 SRR535978 larvae normal 8.71968 SRR516125 skin male and 3.5 year 8.49195 SRR1035237 liver transgenic UHRF1 8.46739 SRR658547 6 somite Gata5/6 morphant 8.402560000000001 SRR519722 4 dpf FETOH treatment 8.144789999999999 SRR1523211 embryo control morpholino 7.98555 SRR776510 embryo Salmonella infected and miR-146 knockdown 7.8846 SRR516123 skin male and 3.5 year 7.828119999999999 SRR038627 embryo control morpholino 7.8175300000000005 SRR776507 embryo normal 7.7732399999999995 ERR023143 swim bladder normal 7.69752 SRR516127 skin male and 5 month 7.672789999999999 SRR527836 24hpf normal 7.61915 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 7.612939999999999 SRR519742 4 dpf VD3 treatment 7.555160000000001 SRR1188148 embryo Control PBS 0.5 hpi 7.53605 SRR1167763 embryo ptpn6 morpholino and bacterial infection 7.53574 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 7.37695 SRR1167752 embryo normal 7.2804 SRR594769 blood normal 7.26783 SRR942764 embryo myd88-/- 7.26138 SRR700537 heart Gata4 morpholino 7.24953 SRR700534 heart control morpholino 7.221019999999999 SRR527840 24hpf normal 7.19164 SRR1647683 spleen SVCV treatment 7.1042 SRR1167756 embryo mpeg1 morpholino 7.042210000000001 SRR519752 7 dpf VD3 treatment 6.981269999999999 SRR519717 2 dpf FETOH treatment 6.94694 SRR519727 6 dpf FETOH treatment 6.89986 SRR658533 bud normal 6.8514800000000005 SRR1342216 embryo norml 6.85053 SRR527833 5 dpf normal 6.845160000000001 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 6.81889 SRR516121 skin male and 3.5 year 6.7134 SRR1647682 spleen normal 6.6756 SRR519737 2 dpf VD3 treatment 6.632789999999999 SRR519732 7 dpf FETOH treatment 6.59495 SRR519747 6 dpf VD3 treatment 6.592689999999999 SRR658545 6 somite Gata6 morphant 6.53568 SRR942769 embryo myd88+/+ 6.52637 ERR023146 head kidney normal 6.49277 SRR594771 endothelium normal 6.43302 SRR1342217 embryo infection with Mycobacterium marinum 6.43126 SRR516129 skin male and 5 month 6.41175 SRR1188152 embryo Insulin 0.5 hpi 6.380730000000001 SRR516131 skin male and 5 month 6.2592300000000005 SRR941749 anterior pectoral fin normal 6.25263 SRR527844 24hpf normal 6.21813 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 6.21624 SRR065197 3 dpf U1C knockout 6.19905 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 6.156000000000001 SRR516126 skin male and 5 month 5.9945900000000005 SRR038626 embryo control morpholino and bacterial infection 5.9549900000000004 SRR1523214 embryo glut12 morpholino 5.931019999999999 SRR891495 heart normal 5.92632 SRR776508 embryo miR-146 knockdown 5.92009 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 5.8967 SRR1647684 spleen SVCV treatment 5.8468599999999995 SRR516133 skin male and 5 month 5.84521 SRR516128 skin male and 5 month 5.70925 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 5.67451 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.67384 SRR1188160 embryo Insulin 4 hpi 5.63819 SRR749514 24 hpf normal 5.56152 SRR726540 5 dpf normal 5.3558900000000005 SRR610742 3 dpf express NICD 5.34049 SRR776509 embryo Salmonella infected 5.3358099999999995 SRR797917 embryo pbx2/4-MO and prdm1-/- 5.3226 SRR514028 retina control morpholino 5.31959 SRR1565819 brain normal 5.27365 SRR658543 6 somite Gata5 morphan 5.17023 SRR1562531 muscle normal 5.1569 SRR1205154 5dpf transgenic sqET20 5.07647 SRR527834 head normal 5.02215 SRR1708346 embryo SIBPS 5.0092300000000005 SRR941753 posterior pectoral fin normal 4.96739 SRR514030 retina id2a morpholino 4.96612 SRR516124 skin male and 3.5 year 4.96517 SRR797914 embryo pbx2/4-MO 4.96454 SRR516135 skin male and 5 month 4.94206 SRR592699 pineal gland normal 4.9395 SRR1565817 brain normal 4.91975 SRR1565813 brain normal 4.90046 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 4.82207 SRR1647680 head kidney SVCV treatment 4.73259 SRR1104058 heart normal 4.6672400000000005 SRR1004786 larvae control morpholino 4.65534 SRR038625 embryo traf6 morpholino 4.63641 SRR065196 3 dpf normal 4.61092 SRR1565815 brain normal 4.58896 SRR1104059 heart kctd10 mut 4.56174 SRR516122 skin male and 3.5 year 4.53806 SRR1565811 brain normal 4.50549 SRR1167762 embryo ptpn6 morpholino 4.48698 SRR038624 embryo traf6 morpholino and bacterial infection 4.45826 SRR1708345 embryo SIBAS 4.43342 SRR749515 24 hpf eif3ha morphant 4.4219599999999994 SRR1569491 embryo normal 4.35973 SRR1004788 larvae impdh1b morpholino 4.3282300000000005 SRR1565807 brain normal 4.27718 SRR1565809 brain normal 4.1954 SRR1534350 larvae 5 ug/l BDE47 treatment 4.15152 SRR1647681 head kidney SVCV treatment 4.1117 SRR658539 bud Gata5/6 morphant 4.07561 SRR658535 bud Gata5 morphant 4.06162 SRR516134 skin male and 5 month 4.0559199999999995 SRR535848 larvae hoxb1b mut 4.05545 SRR1035239 liver transgenic mCherry control 4.0477300000000005 SRR797911 embryo prdm1-/- 4.03187 SRR535847 larvae normal 3.98936 SRR1562530 liver normal 3.9744800000000002 SRR610741 3 dpf express Ras 3.9397599999999997 SRR1188156 embryo Control PBS 4 hpi 3.93966 SRR797908 embryo normal 3.92573 SRR1534349 larvae DMSO vehicle 3.83501 SRR726542 5 dpf infection with control 3.83256 SRR592702 pineal gland normal 3.7800199999999995 SRR516130 skin male and 5 month 3.7321800000000005 SRR1565805 brain normal 3.6616699999999995 SRR592701 pineal gland normal 3.5839199999999996 SRR1004785 larvae normal 3.5569800000000003 SRR1708344 embryo MUTPS 3.5135400000000003 SRR1035984 13 hpf normal 3.5037300000000005 SRR1028004 head normal 3.4929300000000003 ERR594418 retina transgenic flk1 and develop tumors 3.4327 SRR1562528 eye normal 3.4224900000000003 SRR535852 larvae hoxb1b mut 3.3353300000000004 SRR1647679 head kidney normal 3.3122800000000003 SRR658537 bud Gata6 morphant 3.29233 SRR633550 larvae exposed to hypoxia stress 3.25493 SRR633516 larvae normal 3.23486 SRR527832 16-36 hpf normal 3.1816400000000002 SRR1028002 head normal 3.07553 SRR610740 3 dpf normal 3.0346599999999997 SRR1004787 larvae impdh1a morpholino 3.0344599999999997 SRR592700 pineal gland normal 3.0085599999999997 SRR535943 larvae vangl mut 2.99893 SRR891511 brain normal 2.98895 SRR633544 larvae exposed to cold stress 2.98386 SRR1569495 embryo normal 2.95005 SRR535850 larvae hoxb1b mut 2.9232 SRR535851 larvae normal 2.87676 SRR1708343 embryo MUTAS 2.8660099999999997 SRR726541 5 dpf infection with Mycobacterium marinum 2.82742 SRR1562533 testis normal 2.6897900000000003 SRR831692 embryo normal 2.68907 SRR535849 larvae normal 2.66899 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.6374 ERR023145 heart normal 2.6198200000000003 SRR1562532 spleen normal 2.5827 SRR592703 pineal gland normal 2.56703 SRR535926 larvae normal 2.54685 SRR1534351 larvae 500 ug/l BDE47 treatment 2.46443 ERR594416 retina transgenic flk1 2.45181 SRR535913 larvae krox mut 2.3399 SRR891510 muscle normal 2.33527 SRR891512 blood normal 2.33023 SRR1028003 head normal 2.2560599999999997 SRR1035978 13 hpf rx3-/- 2.14384 SRR891504 liver normal 2.11083 SRR535890 larvae normal 1.9667700000000001 ERR594417 retina normal 1.9199 SRR1005529 embryo control morpholino 1.7109400000000001 SRR801554 embryo control morpholino 1.7083599999999999 SRR1048059 pineal gland light 1.6108200000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.4282700000000002 SRR1021215 sphere stage Mzeomesa 1.32991 SRR1004789 larvae impdh2 morpholino 1.2803 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.27186 SRR592698 pineal gland normal 1.16115 SRR800045 muscle normal 1.07489 SRR801556 embryo RPS19 and p53 morpholino 0.860267 SRR748488 sperm normal 0.772559 SRR1048061 pineal gland dark 0.769694 SRR800046 sphere stage 5azaCyD treatment 0.7668229999999999 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.7600399999999999 SRR748491 germ ring normal 0.716123 SRR801555 embryo RPS19 morpholino 0.65646 SRR527835 tail normal 0.608708 SRR1021213 sphere stage normal 0.5825229999999999 SRR1005530 embryo RPL11 morpholino 0.5745060000000001 SRR800043 sphere stage normal 0.277487 SRR800049 sphere stage control treatment 0.151445 SRR748489 egg normal 0.134045 SRR372802 5 dpf normal 0.113685 SRR1648856 brain normal 0.06317590000000001 SRR748490 1 kcell normal 0.0520325 SRR372791 dome normal 0.0479165 SRR372796 bud normal 0.028519799999999998 SRR372798 28 hpf normal 0.021901300000000002