sample tissue condition fpkm SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 95.3092 SRR1004787 larvae impdh1a morpholino 73.8398 SRR1004789 larvae impdh2 morpholino 71.5553 SRR700534 heart control morpholino 70.5843 SRR1035237 liver transgenic UHRF1 69.2941 SRR1004785 larvae normal 59.7264 SRR1035239 liver transgenic mCherry control 59.5367 SRR1004786 larvae control morpholino 58.716 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 57.2959 SRR797908 embryo normal 57.0349 SRR1004788 larvae impdh1b morpholino 52.5227 SRR797917 embryo pbx2/4-MO and prdm1-/- 52.1636 SRR797911 embryo prdm1-/- 51.8606 SRR797914 embryo pbx2/4-MO 51.2409 SRR1035981 13 hpf rx3+/+ or rx3+/- 49.8963 SRR1035984 13 hpf normal 49.703 SRR1035978 13 hpf rx3-/- 48.1743 SRR800037 egg normal 47.5686 SRR700537 heart Gata4 morpholino 46.0138 SRR1708343 embryo MUTAS 38.9152 SRR1039571 gastrointestinal diet 0.1 NPM 37.945 SRR514030 retina id2a morpholino 37.305 SRR1021213 sphere stage normal 36.9459 SRR658535 bud Gata5 morphant 36.9184 SRR514028 retina control morpholino 35.7954 SRR658539 bud Gata5/6 morphant 35.7614 SRR535978 larvae normal 35.5233 SRR1565813 brain normal 35.2773 SRR1021215 sphere stage Mzeomesa 35.1296 SRR038625 embryo traf6 morpholino 35.0379 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 34.6169 SRR658545 6 somite Gata6 morphant 34.5907 SRR535986 larvae nhsl1b mut 34.4088 SRR658533 bud normal 33.4558 SRR658541 6 somite normal 33.2136 SRR633544 larvae exposed to cold stress 33.1679 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 33.1155 SRR1523211 embryo control morpholino 32.8455 SRR1104059 heart kctd10 mut 32.0992 SRR1647684 spleen SVCV treatment 32.0709 SRR957180 heart 7 days after heart tip amputation 31.6811 ERR594418 retina transgenic flk1 and develop tumors 31.6583 SRR1565815 brain normal 31.5976 SRR535890 larvae normal 31.508000000000003 SRR1039573 gastrointestinal diet 0.75 NPM 31.4974 SRR1647681 head kidney SVCV treatment 31.3982 SRR516135 skin male and 5 month 31.0172 SRR038627 embryo control morpholino 30.8582 SRR1565811 brain normal 30.796 SRR957181 heart normal 30.7216 SRR065196 3 dpf normal 30.7082 SRR1565807 brain normal 30.7055 SRR1565819 brain normal 30.6955 SRR1104058 heart normal 30.6715 SRR1565805 brain normal 30.3915 SRR1565809 brain normal 30.0994 SRR527835 tail normal 29.6004 SRR658543 6 somite Gata5 morphan 29.5163 SRR1534351 larvae 500 ug/l BDE47 treatment 28.3449 SRR748488 sperm normal 28.3377 SRR1647680 head kidney SVCV treatment 28.3074 SRR658537 bud Gata6 morphant 28.0592 SRR1565817 brain normal 27.5242 SRR1523214 embryo glut12 morpholino 27.4618 SRR535913 larvae krox mut 27.2165 SRR658547 6 somite Gata5/6 morphant 27.1655 SRR801556 embryo RPS19 and p53 morpholino 26.8115 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 26.6984 SRR594769 blood normal 26.3411 SRR1647679 head kidney normal 26.2021 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 25.8638 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 25.5956 SRR1188152 embryo Insulin 0.5 hpi 25.4468 SRR516127 skin male and 5 month 25.0622 SRR1188160 embryo Insulin 4 hpi 25.0111 SRR1188156 embryo Control PBS 4 hpi 25.0008 SRR800045 muscle normal 24.9092 SRR519737 2 dpf VD3 treatment 24.6408 SRR1708346 embryo SIBPS 24.5464 SRR065197 3 dpf U1C knockout 24.445999999999998 SRR535926 larvae normal 23.8734 SRR726540 5 dpf normal 23.7797 SRR038626 embryo control morpholino and bacterial infection 23.7597 SRR726542 5 dpf infection with control 23.5607 SRR516134 skin male and 5 month 23.3674 SRR535943 larvae vangl mut 23.2455 SRR038624 embryo traf6 morpholino and bacterial infection 22.8912 SRR1534349 larvae DMSO vehicle 22.8816 SRR1569495 embryo normal 22.6099 SRR1188148 embryo Control PBS 0.5 hpi 22.5436 SRR1562530 liver normal 22.3499 SRR519717 2 dpf FETOH treatment 22.3398 SRR891512 blood normal 22.2538 SRR749515 24 hpf eif3ha morphant 22.0861 SRR1708344 embryo MUTPS 22.0689 SRR749514 24 hpf normal 22.0381 SRR726541 5 dpf infection with Mycobacterium marinum 22.0 SRR1562532 spleen normal 21.8175 SRR941753 posterior pectoral fin normal 21.7031 SRR516130 skin male and 5 month 21.5777 SRR527836 24hpf normal 21.5539 SRR372796 bud normal 21.3294 SRR519742 4 dpf VD3 treatment 21.284000000000002 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 21.0043 SRR516129 skin male and 5 month 20.9946 SRR519752 7 dpf VD3 treatment 20.8863 SRR1647683 spleen SVCV treatment 20.7643 SRR1569491 embryo normal 20.6768 SRR941749 anterior pectoral fin normal 20.0283 SRR1291414 5 dpi normal 19.7691 SRR1005530 embryo RPL11 morpholino 19.7383 SRR527832 16-36 hpf normal 19.6746 SRR633550 larvae exposed to hypoxia stress 19.5951 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 19.444000000000003 SRR831692 embryo normal 18.9894 SRR1291417 5 dpi injected marinum 18.7664 SRR1562533 testis normal 18.7463 SRR519722 4 dpf FETOH treatment 18.5912 SRR891504 liver normal 18.5812 SRR633516 larvae normal 18.567999999999998 SRR519747 6 dpf VD3 treatment 17.8445 SRR1562529 intestine and pancreas normal 17.8183 SRR1205154 5dpf transgenic sqET20 17.7135 SRR527833 5 dpf normal 17.6714 SRR1647682 spleen normal 17.4023 SRR519727 6 dpf FETOH treatment 17.2125 SRR1049814 256 cell normal 17.1615 ERR023143 swim bladder normal 17.1536 SRR800043 sphere stage normal 17.0456 ERR594416 retina transgenic flk1 16.9747 SRR535852 larvae hoxb1b mut 16.8571 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 16.8202 SRR610740 3 dpf normal 16.248 SRR1028003 head normal 16.2196 SRR1205160 5dpf transgenic sqET20 and GFP+ 16.1349 SRR1534350 larvae 5 ug/l BDE47 treatment 16.0427 SRR592703 pineal gland normal 16.0082 SRR800046 sphere stage 5azaCyD treatment 15.9448 SRR1708345 embryo SIBAS 15.8858 SRR516126 skin male and 5 month 15.7596 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 15.7184 SRR372793 shield normal 15.6739 SRR516131 skin male and 5 month 15.6531 SRR592701 pineal gland normal 15.4792 SRR535848 larvae hoxb1b mut 15.4275 SRR891510 muscle normal 15.2101 SRR519732 7 dpf FETOH treatment 15.1223 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 15.0853 SRR1299128 caudal fin Three days time after treatment 14.967 ERR023146 head kidney normal 14.9156 SRR1648855 brain normal 14.562999999999999 SRR535849 larvae normal 14.5173 ERR594417 retina normal 14.4302 SRR535851 larvae normal 14.1492 SRR891511 brain normal 14.0397 SRR594771 endothelium normal 13.8968 SRR535847 larvae normal 13.7932 SRR610741 3 dpf express Ras 13.6997 SRR535850 larvae hoxb1b mut 13.6902 SRR1048061 pineal gland dark 13.6224 SRR592702 pineal gland normal 13.5445 SRR801555 embryo RPS19 morpholino 13.0927 ERR023144 brain normal 13.050999999999998 SRR527834 head normal 13.0184 SRR516128 skin male and 5 month 12.9589 SRR1562528 eye normal 12.7266 SRR516133 skin male and 5 month 12.6744 SRR592698 pineal gland normal 12.3339 SRR1621206 embryo normal 12.173 SRR527840 24hpf normal 11.9526 SRR372789 1K cell normal 11.8921 SRR372798 28 hpf normal 11.8816 SRR516123 skin male and 3.5 year 11.7165 SRR1299125 caudal fin Half day time after treatment 11.5995 SRR800049 sphere stage control treatment 11.4247 SRR516125 skin male and 3.5 year 11.3586 SRR527844 24hpf normal 11.189 SRR1648854 brain normal 11.1042 SRR592700 pineal gland normal 10.987 SRR1167756 embryo mpeg1 morpholino 10.6974 SRR630463 5 dpf normal 10.4891 SRR1005529 embryo control morpholino 10.4233 SRR801554 embryo control morpholino 10.4076 SRR891495 heart normal 10.0063 SRR1167757 embryo mpeg1 morpholino and bacterial infection 9.9429 SRR516124 skin male and 3.5 year 9.72813 SRR1028004 head normal 9.6753 SRR610742 3 dpf express NICD 9.40496 SRR516121 skin male and 3.5 year 9.35038 SRR1048059 pineal gland light 9.229510000000001 SRR516132 skin male and 5 month 9.20628 SRR1167762 embryo ptpn6 morpholino 9.15911 SRR1299129 caudal fin Seven days time after treatment 8.91164 ERR023145 heart normal 8.5533 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 8.55039 SRR630464 5 dpf injected epidermidis 8.471630000000001 SRR1299124 caudal fin Zero day time after treatment 8.34453 SRR516122 skin male and 3.5 year 8.2785 SRR372800 2 dpf normal 8.24354 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 8.213410000000001 SRR1299127 caudal fin Two days time after treatment 8.20096 SRR748490 1 kcell normal 8.02121 SRR372787 2-4 cell normal 7.9809399999999995 SRR1342217 embryo infection with Mycobacterium marinum 7.88973 SRR776508 embryo miR-146 knockdown 7.8081 SRR1028002 head normal 7.11234 SRR748491 germ ring normal 6.9225 SRR1167763 embryo ptpn6 morpholino and bacterial infection 6.7086 SRR1167752 embryo normal 6.55159 SRR942769 embryo myd88+/+ 6.49799 SRR372791 dome normal 6.435969999999999 SRR1167753 embryo bacterial infection 6.43171 SRR886456 256 cell 4-thio-UTP metabolic labeling 6.4177599999999995 SRR886455 128 cell 4-thio-UTP metabolic labeling 6.36279 SRR1299126 caudal fin One day time after treatment 5.76003 SRR776510 embryo Salmonella infected and miR-146 knockdown 5.60099 SRR776507 embryo normal 5.57214 SRR592699 pineal gland normal 5.36789 SRR1562531 muscle normal 5.18404 SRR942764 embryo myd88-/- 4.699269999999999 SRR1342216 embryo norml 4.5684 SRR748489 egg normal 4.36625 SRR1342218 embryo marco morpholino 4.11439 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.58034 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.2258 SRR1648856 brain normal 0.806002 SRR776509 embryo Salmonella infected 0.00345421