sample tissue condition fpkm SRR658533 bud normal 52.3126 SRR658547 6 somite Gata5/6 morphant 47.1238 SRR658545 6 somite Gata6 morphant 44.3223 SRR658535 bud Gata5 morphant 41.7632 SRR658539 bud Gata5/6 morphant 40.5128 SRR658537 bud Gata6 morphant 38.2657 SRR658541 6 somite normal 34.9361 SRR748491 germ ring normal 32.0053 SRR658543 6 somite Gata5 morphan 31.0639 SRR527840 24hpf normal 27.755 SRR1021213 sphere stage normal 27.3267 SRR527836 24hpf normal 23.8238 SRR1021215 sphere stage Mzeomesa 21.9363 SRR776508 embryo miR-146 knockdown 21.9214 ERR023144 brain normal 21.888 SRR1035981 13 hpf rx3+/+ or rx3+/- 21.7274 SRR535978 larvae normal 21.276 SRR776507 embryo normal 20.5372 SRR1569491 embryo normal 19.6157 SRR1299126 caudal fin One day time after treatment 18.4583 SRR1035978 13 hpf rx3-/- 17.9217 SRR527832 16-36 hpf normal 17.6113 SRR1299127 caudal fin Two days time after treatment 17.2732 SRR535986 larvae nhsl1b mut 17.1956 SRR527835 tail normal 16.9879 SRR1299128 caudal fin Three days time after treatment 16.9859 SRR776510 embryo Salmonella infected and miR-146 knockdown 16.715 SRR776509 embryo Salmonella infected 16.6202 SRR1299125 caudal fin Half day time after treatment 16.3751 SRR038627 embryo control morpholino 15.5334 SRR038625 embryo traf6 morpholino 14.9225 SRR1035984 13 hpf normal 14.6762 SRR516121 skin male and 3.5 year 14.5609 SRR797914 embryo pbx2/4-MO 14.0256 SRR1299129 caudal fin Seven days time after treatment 13.7512 SRR797917 embryo pbx2/4-MO and prdm1-/- 13.6114 SRR749515 24 hpf eif3ha morphant 13.6105 SRR749514 24 hpf normal 13.3247 SRR1523214 embryo glut12 morpholino 13.2834 SRR1523211 embryo control morpholino 13.2259 SRR516123 skin male and 3.5 year 13.1349 SRR527844 24hpf normal 13.0005 SRR797908 embryo normal 12.967 SRR1299124 caudal fin Zero day time after treatment 12.6948 SRR797911 embryo prdm1-/- 12.3241 SRR514028 retina control morpholino 11.6402 SRR1708343 embryo MUTAS 11.2567 SRR700537 heart Gata4 morpholino 11.0473 ERR023143 swim bladder normal 11.0396 SRR1291414 5 dpi normal 10.6627 SRR038626 embryo control morpholino and bacterial infection 10.2901 SRR527833 5 dpf normal 10.2316 SRR516125 skin male and 3.5 year 10.2277 SRR516131 skin male and 5 month 9.97918 SRR1708345 embryo SIBAS 9.96975 SRR516124 skin male and 3.5 year 9.96857 SRR038624 embryo traf6 morpholino and bacterial infection 9.95088 SRR594771 endothelium normal 9.82029 SRR516122 skin male and 3.5 year 9.6977 SRR630463 5 dpf normal 9.6396 SRR514030 retina id2a morpholino 9.44567 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 9.14045 SRR1708346 embryo SIBPS 9.096680000000001 SRR1342216 embryo norml 9.02881 SRR1035237 liver transgenic UHRF1 9.00816 SRR1647680 head kidney SVCV treatment 8.95837 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 8.91962 SRR1647683 spleen SVCV treatment 8.84868 SRR1342218 embryo marco morpholino 8.749139999999999 SRR516127 skin male and 5 month 8.745510000000001 SRR700534 heart control morpholino 8.70302 SRR1004786 larvae control morpholino 8.64153 SRR1647679 head kidney normal 8.596910000000001 SRR1188152 embryo Insulin 0.5 hpi 8.52178 SRR630464 5 dpf injected epidermidis 8.45345 SRR516126 skin male and 5 month 8.42356 SRR748489 egg normal 8.343110000000001 SRR942769 embryo myd88+/+ 8.262739999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 8.097480000000001 SRR516130 skin male and 5 month 8.09428 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 8.04219 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 7.96983 SRR516134 skin male and 5 month 7.91374 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 7.88748 SRR1647681 head kidney SVCV treatment 7.8624600000000004 SRR1291417 5 dpi injected marinum 7.72023 SRR1647682 spleen normal 7.707000000000001 SRR1004788 larvae impdh1b morpholino 7.685630000000001 ERR023146 head kidney normal 7.61735 SRR942764 embryo myd88-/- 7.59427 SRR594769 blood normal 7.59359 SRR1188160 embryo Insulin 4 hpi 7.5858 SRR1167753 embryo bacterial infection 7.565119999999999 SRR1167752 embryo normal 7.54703 SRR1167762 embryo ptpn6 morpholino 7.490880000000001 SRR1004785 larvae normal 7.41649 SRR1104059 heart kctd10 mut 7.41043 SRR886455 128 cell 4-thio-UTP metabolic labeling 7.396730000000001 SRR516129 skin male and 5 month 7.182119999999999 SRR516132 skin male and 5 month 7.1688600000000005 SRR1562529 intestine and pancreas normal 7.16326 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 7.15821 SRR1104058 heart normal 7.13714 SRR065196 3 dpf normal 7.09842 SRR1167763 embryo ptpn6 morpholino and bacterial infection 7.041689999999999 SRR1569495 embryo normal 7.015810000000001 SRR1647684 spleen SVCV treatment 7.014939999999999 SRR516133 skin male and 5 month 6.995189999999999 SRR1342217 embryo infection with Mycobacterium marinum 6.95056 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 6.91728 SRR1004787 larvae impdh1a morpholino 6.824339999999999 SRR535926 larvae normal 6.81266 SRR1188148 embryo Control PBS 0.5 hpi 6.763910000000001 SRR516128 skin male and 5 month 6.695119999999999 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 6.684130000000001 SRR748490 1 kcell normal 6.6232 SRR535943 larvae vangl mut 6.57828 SRR886456 256 cell 4-thio-UTP metabolic labeling 6.4660400000000005 SRR1167757 embryo mpeg1 morpholino and bacterial infection 6.4489 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 6.344869999999999 SRR1708344 embryo MUTPS 6.31462 SRR1562532 spleen normal 6.27768 SRR1004789 larvae impdh2 morpholino 6.02125 SRR1562533 testis normal 6.01281 SRR1205160 5dpf transgenic sqET20 and GFP+ 5.95676 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 5.81907 SRR527834 head normal 5.62138 SRR891495 heart normal 5.61763 SRR065197 3 dpf U1C knockout 5.42004 SRR1167756 embryo mpeg1 morpholino 5.354030000000001 SRR886457 512 cell 4-thio-UTP metabolic labeling 5.2899199999999995 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.2864 SRR891511 brain normal 5.13462 SRR801556 embryo RPS19 and p53 morpholino 5.0269 SRR1005529 embryo control morpholino 4.68921 SRR801554 embryo control morpholino 4.68136 SRR1035239 liver transgenic mCherry control 4.56968 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 4.52426 SRR1205154 5dpf transgenic sqET20 4.24151 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 4.19509 SRR516135 skin male and 5 month 4.18578 SRR1562530 liver normal 4.16501 SRR1565813 brain normal 4.114380000000001 SRR1562531 muscle normal 4.1106 SRR891512 blood normal 4.0764 SRR1188156 embryo Control PBS 4 hpi 4.04389 SRR535890 larvae normal 4.00049 SRR535913 larvae krox mut 3.8855699999999995 SRR610742 3 dpf express NICD 3.7736099999999997 SRR592698 pineal gland normal 3.7229099999999997 SRR610741 3 dpf express Ras 3.70088 SRR801555 embryo RPS19 morpholino 3.6823699999999997 SRR535852 larvae hoxb1b mut 3.6732 SRR519717 2 dpf FETOH treatment 3.6570400000000003 SRR1562528 eye normal 3.6471 SRR1565819 brain normal 3.45108 SRR1565811 brain normal 3.39854 SRR610740 3 dpf normal 3.35036 ERR023145 heart normal 3.27175 SRR748488 sperm normal 3.24 SRR519737 2 dpf VD3 treatment 3.21864 SRR519742 4 dpf VD3 treatment 3.18688 SRR1565805 brain normal 3.17372 SRR831692 embryo normal 3.13932 SRR1039571 gastrointestinal diet 0.1 NPM 3.11904 SRR1565807 brain normal 3.1031299999999997 SRR1565809 brain normal 3.06243 SRR1565817 brain normal 2.93755 SRR535847 larvae normal 2.85588 ERR594418 retina transgenic flk1 and develop tumors 2.8557 SRR800037 egg normal 2.76233 SRR1565815 brain normal 2.7615 SRR891510 muscle normal 2.68046 SRR1005530 embryo RPL11 morpholino 2.6393299999999997 SRR633550 larvae exposed to hypoxia stress 2.5632 SRR535849 larvae normal 2.476 SRR519722 4 dpf FETOH treatment 2.41132 SRR941749 anterior pectoral fin normal 2.40976 SRR726541 5 dpf infection with Mycobacterium marinum 2.3772599999999997 SRR1039573 gastrointestinal diet 0.75 NPM 2.33003 SRR1048061 pineal gland dark 2.2982400000000003 SRR1028004 head normal 2.292 SRR535850 larvae hoxb1b mut 2.2414 ERR594417 retina normal 2.19501 SRR592702 pineal gland normal 2.1865099999999997 SRR726540 5 dpf normal 2.16278 SRR535848 larvae hoxb1b mut 2.1322900000000002 ERR594416 retina transgenic flk1 2.13073 SRR1028003 head normal 2.10485 SRR592700 pineal gland normal 2.06969 SRR726542 5 dpf infection with control 2.06542 SRR519747 6 dpf VD3 treatment 2.04303 SRR633544 larvae exposed to cold stress 2.02446 SRR592699 pineal gland normal 1.89743 SRR633516 larvae normal 1.7756299999999998 SRR519752 7 dpf VD3 treatment 1.74647 SRR519727 6 dpf FETOH treatment 1.66953 SRR1534351 larvae 500 ug/l BDE47 treatment 1.5956299999999999 SRR1048059 pineal gland light 1.5432700000000001 SRR519732 7 dpf FETOH treatment 1.47306 SRR1534350 larvae 5 ug/l BDE47 treatment 1.46607 SRR941753 posterior pectoral fin normal 1.43794 SRR592701 pineal gland normal 1.41394 SRR1534349 larvae DMSO vehicle 1.36214 SRR1028002 head normal 1.28664 SRR535851 larvae normal 1.24768 SRR592703 pineal gland normal 1.15609 SRR800045 muscle normal 0.9251370000000001 SRR891504 liver normal 0.8652190000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.5579350000000001 SRR800046 sphere stage 5azaCyD treatment 0.196705 SRR800049 sphere stage control treatment 0.15474000000000002 SRR800043 sphere stage normal 0.0679578 SRR372793 shield normal 0.023202599999999997 SRR957180 heart 7 days after heart tip amputation 0.00620413 SRR1049814 256 cell normal 0.00132553