sample tissue condition fpkm SRR658537 bud Gata6 morphant 62.7722 SRR1021215 sphere stage Mzeomesa 60.1942 SRR1021213 sphere stage normal 46.6616 SRR658535 bud Gata5 morphant 43.3741 SRR658543 6 somite Gata5 morphan 43.0297 SRR592703 pineal gland normal 39.7943 SRR658533 bud normal 39.6156 SRR592701 pineal gland normal 39.3784 SRR941749 anterior pectoral fin normal 39.2356 SRR658545 6 somite Gata6 morphant 38.6406 SRR800037 egg normal 38.1625 SRR941753 posterior pectoral fin normal 37.0038 SRR658541 6 somite normal 36.5838 SRR1035981 13 hpf rx3+/+ or rx3+/- 35.8657 SRR800043 sphere stage normal 35.3184 SRR700534 heart control morpholino 35.1073 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 33.7832 SRR658539 bud Gata5/6 morphant 33.3451 SRR1035978 13 hpf rx3-/- 33.0621 SRR592702 pineal gland normal 31.3988 SRR797911 embryo prdm1-/- 30.9872 SRR800049 sphere stage control treatment 30.864 SRR800046 sphere stage 5azaCyD treatment 30.6425 SRR1565815 brain normal 30.5047 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 30.0598 SRR797908 embryo normal 29.1717 SRR1565807 brain normal 28.4482 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 28.2645 SRR658547 6 somite Gata5/6 morphant 28.1747 SRR726540 5 dpf normal 28.0836 SRR1188156 embryo Control PBS 4 hpi 27.9317 SRR1565811 brain normal 27.6902 SRR1565817 brain normal 27.5415 SRR1565809 brain normal 26.7819 SRR594771 endothelium normal 25.9688 SRR1205154 5dpf transgenic sqET20 25.9545 SRR594769 blood normal 25.9408 SRR797914 embryo pbx2/4-MO 25.6499 SRR1565819 brain normal 25.2942 SRR527834 head normal 25.0858 SRR797917 embryo pbx2/4-MO and prdm1-/- 23.9945 SRR1035984 13 hpf normal 23.5943 SRR1565805 brain normal 23.5909 SRR886455 128 cell 4-thio-UTP metabolic labeling 23.3438 SRR527833 5 dpf normal 23.2504 SRR726541 5 dpf infection with Mycobacterium marinum 23.1558 SRR749514 24 hpf normal 22.3963 SRR372791 dome normal 21.9386 SRR1523214 embryo glut12 morpholino 21.6017 SRR1565813 brain normal 21.5756 ERR594416 retina transgenic flk1 20.9437 SRR1569495 embryo normal 20.3498 SRR886457 512 cell 4-thio-UTP metabolic labeling 20.3326 SRR1621206 embryo normal 20.3162 SRR592699 pineal gland normal 20.3052 ERR594417 retina normal 19.4456 SRR1049814 256 cell normal 19.2745 SRR516129 skin male and 5 month 19.2161 SRR748491 germ ring normal 19.1452 SRR726542 5 dpf infection with control 19.1199 SRR886456 256 cell 4-thio-UTP metabolic labeling 18.9533 SRR527835 tail normal 18.6485 SRR1291417 5 dpi injected marinum 18.4547 SRR749515 24 hpf eif3ha morphant 18.2727 SRR516132 skin male and 5 month 18.1311 SRR372796 bud normal 18.0715 SRR1647682 spleen normal 18.0618 SRR1648855 brain normal 17.951 SRR516124 skin male and 3.5 year 17.9384 SRR1647679 head kidney normal 17.9237 SRR700537 heart Gata4 morpholino 17.887 SRR065196 3 dpf normal 17.7751 SRR1188148 embryo Control PBS 0.5 hpi 17.7671 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 17.4786 SRR038626 embryo control morpholino and bacterial infection 17.4223 SRR1028004 head normal 17.4084 SRR514030 retina id2a morpholino 17.3168 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 17.1583 SRR516121 skin male and 3.5 year 17.0248 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 16.4942 SRR1188152 embryo Insulin 0.5 hpi 16.457 SRR038625 embryo traf6 morpholino 15.8159 SRR527832 16-36 hpf normal 15.6199 SRR942764 embryo myd88-/- 15.4803 SRR1167757 embryo mpeg1 morpholino and bacterial infection 15.4156 SRR957180 heart 7 days after heart tip amputation 15.2063 SRR1205160 5dpf transgenic sqET20 and GFP+ 15.1148 SRR633550 larvae exposed to hypoxia stress 15.0528 SRR748490 1 kcell normal 14.5312 SRR1167752 embryo normal 14.5075 SRR516123 skin male and 3.5 year 14.4962 ERR594418 retina transgenic flk1 and develop tumors 14.4237 SRR372787 2-4 cell normal 14.4219 SRR1562528 eye normal 14.3303 SRR519727 6 dpf FETOH treatment 14.1716 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 14.0691 SRR1104059 heart kctd10 mut 14.0143 SRR1167762 embryo ptpn6 morpholino 13.9703 SRR1647680 head kidney SVCV treatment 13.9349 SRR633544 larvae exposed to cold stress 13.9235 SRR1104058 heart normal 13.8574 ERR023144 brain normal 13.7788 SRR535913 larvae krox mut 13.5512 SRR1167763 embryo ptpn6 morpholino and bacterial infection 13.4616 SRR592700 pineal gland normal 13.4604 SRR1708343 embryo MUTAS 13.3465 SRR1048059 pineal gland light 13.3438 SRR633516 larvae normal 13.3306 SRR1188160 embryo Insulin 4 hpi 13.3185 SRR519732 7 dpf FETOH treatment 13.2189 SRR372789 1K cell normal 13.2105 SRR535850 larvae hoxb1b mut 13.1067 SRR1342216 embryo norml 13.0974 SRR372793 shield normal 12.9959 SRR519722 4 dpf FETOH treatment 12.8458 SRR1167753 embryo bacterial infection 12.8242 SRR1048061 pineal gland dark 12.7958 SRR516133 skin male and 5 month 12.7806 SRR1647683 spleen SVCV treatment 12.7749 SRR535852 larvae hoxb1b mut 12.6513 ERR023143 swim bladder normal 12.6056 SRR516126 skin male and 5 month 12.4 SRR065197 3 dpf U1C knockout 12.3858 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 12.3457 SRR519752 7 dpf VD3 treatment 12.1636 SRR516128 skin male and 5 month 12.1113 SRR535890 larvae normal 12.0321 SRR1028002 head normal 12.0185 SRR1534351 larvae 500 ug/l BDE47 treatment 11.7234 SRR1004788 larvae impdh1b morpholino 11.7227 SRR519747 6 dpf VD3 treatment 11.5671 SRR1647684 spleen SVCV treatment 11.5509 SRR516135 skin male and 5 month 11.3371 SRR038624 embryo traf6 morpholino and bacterial infection 11.2976 SRR1004787 larvae impdh1a morpholino 11.2106 SRR592698 pineal gland normal 11.0739 SRR1291414 5 dpi normal 11.0534 SRR1167756 embryo mpeg1 morpholino 11.0195 SRR748488 sperm normal 10.9423 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 10.9066 SRR535849 larvae normal 10.7887 SRR535847 larvae normal 10.7305 SRR1004789 larvae impdh2 morpholino 10.4369 SRR516125 skin male and 3.5 year 10.2658 SRR1342218 embryo marco morpholino 10.2542 SRR519742 4 dpf VD3 treatment 10.1181 SRR831692 embryo normal 10.0792 SRR630463 5 dpf normal 10.0048 SRR535851 larvae normal 10.0041 SRR535848 larvae hoxb1b mut 9.98504 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 9.96075 SRR1342217 embryo infection with Mycobacterium marinum 9.923810000000001 SRR1562532 spleen normal 9.86347 SRR942769 embryo myd88+/+ 9.78386 SRR1028003 head normal 9.66643 SRR514028 retina control morpholino 9.604330000000001 SRR1562533 testis normal 9.60396 SRR516127 skin male and 5 month 9.55004 SRR1647681 head kidney SVCV treatment 9.30023 SRR1004786 larvae control morpholino 9.207460000000001 SRR1004785 larvae normal 9.12228 SRR516122 skin male and 3.5 year 9.0671 SRR372802 5 dpf normal 9.0312 SRR519717 2 dpf FETOH treatment 8.70452 SRR1534349 larvae DMSO vehicle 8.52095 SRR1648854 brain normal 8.422789999999999 SRR516130 skin male and 5 month 8.41297 SRR519737 2 dpf VD3 treatment 8.39756 SRR535943 larvae vangl mut 8.30286 SRR957181 heart normal 8.2164 SRR610742 3 dpf express NICD 8.16489 SRR1523211 embryo control morpholino 8.10041 SRR610740 3 dpf normal 7.997960000000001 SRR1039571 gastrointestinal diet 0.1 NPM 7.702380000000001 SRR891511 brain normal 7.54743 SRR1005529 embryo control morpholino 7.49776 SRR801554 embryo control morpholino 7.486489999999999 SRR630464 5 dpf injected epidermidis 7.40085 SRR800045 muscle normal 7.15884 SRR1035239 liver transgenic mCherry control 7.04228 SRR1534350 larvae 5 ug/l BDE47 treatment 7.01585 SRR516131 skin male and 5 month 6.98867 SRR516134 skin male and 5 month 6.9461 SRR535926 larvae normal 6.895639999999999 SRR038627 embryo control morpholino 6.89098 SRR1562529 intestine and pancreas normal 6.72845 SRR1708345 embryo SIBAS 6.52238 SRR1299124 caudal fin Zero day time after treatment 6.48961 SRR1708346 embryo SIBPS 6.11038 SRR1005530 embryo RPL11 morpholino 5.92946 SRR776508 embryo miR-146 knockdown 5.882630000000001 SRR1708344 embryo MUTPS 5.6483300000000005 SRR1569491 embryo normal 5.32001 SRR776509 embryo Salmonella infected 5.17023 SRR610741 3 dpf express Ras 5.1414800000000005 SRR527840 24hpf normal 5.04122 SRR1299128 caudal fin Three days time after treatment 4.982819999999999 SRR1039573 gastrointestinal diet 0.75 NPM 4.684019999999999 SRR776510 embryo Salmonella infected and miR-146 knockdown 4.53125 SRR1562531 muscle normal 4.24151 SRR372798 28 hpf normal 4.14832 SRR1299129 caudal fin Seven days time after treatment 3.95557 SRR527844 24hpf normal 3.54924 SRR748489 egg normal 3.4891900000000002 SRR527836 24hpf normal 3.1012299999999997 SRR535986 larvae nhsl1b mut 3.0207900000000003 SRR372800 2 dpf normal 2.84816 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 2.7051 SRR1299127 caudal fin Two days time after treatment 2.68495 ERR023145 heart normal 2.62982 SRR776507 embryo normal 2.62325 SRR1562530 liver normal 2.59376 SRR801555 embryo RPS19 morpholino 2.47568 ERR023146 head kidney normal 2.2814099999999997 SRR891495 heart normal 2.15044 SRR891512 blood normal 2.09767 SRR535978 larvae normal 1.76426 SRR1035237 liver transgenic UHRF1 1.58467 SRR1299125 caudal fin Half day time after treatment 1.06152 SRR1299126 caudal fin One day time after treatment 0.985218 SRR801556 embryo RPS19 and p53 morpholino 0.9380629999999999 SRR891510 muscle normal 0.767175 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.15574100000000002 SRR1648856 brain normal 0.153866 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.108569