sample tissue condition fpkm SRR1035978 13 hpf rx3-/- 32.6704 SRR1035981 13 hpf rx3+/+ or rx3+/- 28.8207 SRR658539 bud Gata5/6 morphant 19.4742 SRR886456 256 cell 4-thio-UTP metabolic labeling 19.2055 SRR658535 bud Gata5 morphant 18.0476 SRR658543 6 somite Gata5 morphan 18.0156 SRR886455 128 cell 4-thio-UTP metabolic labeling 17.5691 SRR658533 bud normal 17.086 SRR658545 6 somite Gata6 morphant 16.5635 SRR658547 6 somite Gata5/6 morphant 15.9257 SRR658541 6 somite normal 15.5302 SRR886457 512 cell 4-thio-UTP metabolic labeling 15.2059 SRR1035984 13 hpf normal 14.8514 SRR1565815 brain normal 14.8513 SRR1565811 brain normal 14.4859 SRR749514 24 hpf normal 14.4778 SRR038625 embryo traf6 morpholino 14.29 SRR1565809 brain normal 14.0225 SRR797908 embryo normal 13.8927 SRR1004789 larvae impdh2 morpholino 13.5716 SRR797914 embryo pbx2/4-MO 13.1963 SRR749515 24 hpf eif3ha morphant 12.8378 SRR1569495 embryo normal 12.5679 SRR1565819 brain normal 12.5531 SRR797911 embryo prdm1-/- 12.4914 SRR1565817 brain normal 12.0666 SRR658537 bud Gata6 morphant 11.9321 SRR594771 endothelium normal 11.5226 SRR1708345 embryo SIBAS 11.4548 SRR1565807 brain normal 11.3341 ERR594417 retina normal 11.2475 SRR1708343 embryo MUTAS 11.2378 SRR372796 bud normal 10.9839 SRR1565805 brain normal 10.9371 SRR797917 embryo pbx2/4-MO and prdm1-/- 10.7618 SRR1048061 pineal gland dark 10.2952 SRR1565813 brain normal 10.2138 SRR1021215 sphere stage Mzeomesa 10.1661 SRR1104059 heart kctd10 mut 9.32589 SRR527834 head normal 9.01165 SRR1021213 sphere stage normal 8.50178 SRR1104058 heart normal 8.443430000000001 SRR038624 embryo traf6 morpholino and bacterial infection 8.3633 SRR1708346 embryo SIBPS 8.021180000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 7.987710000000001 SRR038626 embryo control morpholino and bacterial infection 7.97715 SRR941749 anterior pectoral fin normal 7.9021 SRR1004787 larvae impdh1a morpholino 7.86009 SRR1004788 larvae impdh1b morpholino 7.45635 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.4493 SRR038627 embryo control morpholino 7.14487 SRR1708344 embryo MUTPS 6.96367 SRR941753 posterior pectoral fin normal 6.66193 SRR726540 5 dpf normal 6.54552 SRR1048059 pineal gland light 6.4995 SRR748488 sperm normal 6.41536 SRR800046 sphere stage 5azaCyD treatment 6.30576 SRR633544 larvae exposed to cold stress 6.28445 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 6.10554 ERR594416 retina transgenic flk1 6.03881 SRR800043 sphere stage normal 6.0387 SRR535890 larvae normal 6.0281 SRR1188156 embryo Control PBS 4 hpi 6.01826 SRR592703 pineal gland normal 5.79443 SRR594769 blood normal 5.705030000000001 SRR527832 16-36 hpf normal 5.66247 SRR957181 heart normal 5.6177 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.15919 SRR957180 heart 7 days after heart tip amputation 5.0202599999999995 SRR372798 28 hpf normal 4.96671 SRR800045 muscle normal 4.95086 SRR535943 larvae vangl mut 4.937 SRR592698 pineal gland normal 4.8439 SRR535926 larvae normal 4.82342 SRR1562533 testis normal 4.78914 SRR700537 heart Gata4 morpholino 4.77396 SRR726541 5 dpf infection with Mycobacterium marinum 4.63283 SRR726542 5 dpf infection with control 4.5528900000000005 SRR527833 5 dpf normal 4.50001 SRR514030 retina id2a morpholino 4.4108 SRR516132 skin male and 5 month 4.38168 SRR1004786 larvae control morpholino 4.35653 SRR065197 3 dpf U1C knockout 4.3397 SRR592702 pineal gland normal 4.23252 SRR800049 sphere stage control treatment 4.22656 SRR800037 egg normal 4.1961900000000005 SRR1562528 eye normal 4.18253 ERR594418 retina transgenic flk1 and develop tumors 4.11569 SRR633516 larvae normal 4.10733 SRR610741 3 dpf express Ras 3.9992099999999997 SRR1562531 muscle normal 3.82283 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 3.8137800000000004 SRR372802 5 dpf normal 3.6884900000000003 SRR891511 brain normal 3.6569300000000005 SRR891504 liver normal 3.49557 SRR535913 larvae krox mut 3.3730599999999997 SRR1005530 embryo RPL11 morpholino 3.24193 SRR633550 larvae exposed to hypoxia stress 3.19033 SRR372791 dome normal 3.1823099999999998 SRR1039573 gastrointestinal diet 0.75 NPM 3.1000099999999997 SRR1523214 embryo glut12 morpholino 3.09718 SRR1205160 5dpf transgenic sqET20 and GFP+ 3.06799 SRR1621206 embryo normal 3.00825 SRR1562532 spleen normal 3.0073 SRR1188148 embryo Control PBS 0.5 hpi 2.96254 SRR535849 larvae normal 2.93853 SRR1004785 larvae normal 2.85118 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.69846 SRR535848 larvae hoxb1b mut 2.6692099999999996 SRR1562530 liver normal 2.6650400000000003 SRR527835 tail normal 2.58145 SRR592701 pineal gland normal 2.57658 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.54362 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.52537 SRR535850 larvae hoxb1b mut 2.47991 SRR1205154 5dpf transgenic sqET20 2.3999 SRR372793 shield normal 2.36669 SRR535852 larvae hoxb1b mut 2.29957 SRR372789 1K cell normal 2.29568 SRR1049814 256 cell normal 2.27228 SRR1167756 embryo mpeg1 morpholino 2.17077 SRR1534349 larvae DMSO vehicle 2.10208 SRR1188160 embryo Insulin 4 hpi 2.05155 SRR1028003 head normal 2.03267 SRR592700 pineal gland normal 1.9863099999999998 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.88325 SRR372800 2 dpf normal 1.8526200000000002 SRR065196 3 dpf normal 1.8475099999999998 SRR891512 blood normal 1.8160900000000002 SRR801556 embryo RPS19 and p53 morpholino 1.81224 SRR1647679 head kidney normal 1.7421200000000001 SRR527844 24hpf normal 1.73669 SRR519727 6 dpf FETOH treatment 1.7101 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.69145 SRR1523211 embryo control morpholino 1.67995 SRR1028002 head normal 1.6795099999999998 SRR700534 heart control morpholino 1.6475099999999998 SRR1028004 head normal 1.55362 SRR1647684 spleen SVCV treatment 1.52549 SRR1291414 5 dpi normal 1.52036 SRR519717 2 dpf FETOH treatment 1.46597 SRR516134 skin male and 5 month 1.41286 SRR516133 skin male and 5 month 1.39703 SRR831692 embryo normal 1.3747 SRR516123 skin male and 3.5 year 1.33687 SRR1188152 embryo Insulin 0.5 hpi 1.32089 SRR535847 larvae normal 1.29902 SRR1039571 gastrointestinal diet 0.1 NPM 1.27845 SRR519752 7 dpf VD3 treatment 1.27186 SRR519747 6 dpf VD3 treatment 1.21943 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.20818 SRR514028 retina control morpholino 1.1726299999999998 SRR592699 pineal gland normal 1.16961 SRR1342217 embryo infection with Mycobacterium marinum 1.0832899999999999 SRR748491 germ ring normal 1.03414 SRR1167752 embryo normal 1.02478 SRR535851 larvae normal 1.0217399999999999 SRR519737 2 dpf VD3 treatment 1.0089299999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.976223 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.963354 SRR1562529 intestine and pancreas normal 0.921583 SRR1299124 caudal fin Zero day time after treatment 0.90535 SRR1534351 larvae 500 ug/l BDE47 treatment 0.898495 SRR516127 skin male and 5 month 0.893123 ERR023144 brain normal 0.854942 SRR801555 embryo RPS19 morpholino 0.851806 SRR519732 7 dpf FETOH treatment 0.849233 SRR1342216 embryo norml 0.845144 SRR516135 skin male and 5 month 0.84178 SRR1005529 embryo control morpholino 0.8267129999999999 SRR801554 embryo control morpholino 0.825376 SRR1647681 head kidney SVCV treatment 0.805284 SRR748490 1 kcell normal 0.77493 SRR516131 skin male and 5 month 0.769691 SRR1569491 embryo normal 0.759691 SRR519742 4 dpf VD3 treatment 0.758538 SRR1647680 head kidney SVCV treatment 0.700968 SRR1299128 caudal fin Three days time after treatment 0.696141 SRR630464 5 dpf injected epidermidis 0.684167 SRR891510 muscle normal 0.671867 SRR1342218 embryo marco morpholino 0.662561 SRR1647682 spleen normal 0.641532 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.6236 SRR519722 4 dpf FETOH treatment 0.621621 SRR1647683 spleen SVCV treatment 0.594436 SRR372787 2-4 cell normal 0.578883 SRR1299125 caudal fin Half day time after treatment 0.559299 SRR516129 skin male and 5 month 0.529226 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.508861 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.5075609999999999 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.474984 SRR942769 embryo myd88+/+ 0.47135 SRR516125 skin male and 3.5 year 0.46373100000000006 SRR516130 skin male and 5 month 0.447233 SRR1648855 brain normal 0.442625 SRR776509 embryo Salmonella infected 0.437404 SRR535986 larvae nhsl1b mut 0.432673 SRR1035239 liver transgenic mCherry control 0.41521099999999994 SRR748489 egg normal 0.377794 SRR610740 3 dpf normal 0.358953 SRR1167753 embryo bacterial infection 0.349889 SRR1035237 liver transgenic UHRF1 0.328726 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.291132 SRR516126 skin male and 5 month 0.207483 SRR1534350 larvae 5 ug/l BDE47 treatment 0.19227 ERR023143 swim bladder normal 0.169685 SRR1291417 5 dpi injected marinum 0.145525 ERR023146 head kidney normal 0.110098 SRR630463 5 dpf normal 0.0923576 SRR527840 24hpf normal 0.00363427 SRR610742 3 dpf express NICD 0.00184739