sample tissue condition fpkm SRR1035978 13 hpf rx3-/- 71.6326 SRR1569495 embryo normal 67.9562 SRR1035981 13 hpf rx3+/+ or rx3+/- 51.0208 SRR658541 6 somite normal 47.6267 SRR658545 6 somite Gata6 morphant 47.5482 SRR527832 16-36 hpf normal 45.8454 SRR658547 6 somite Gata5/6 morphant 44.4037 SRR658543 6 somite Gata5 morphan 41.7754 SRR594771 endothelium normal 39.5132 SRR1035984 13 hpf normal 39.4784 SRR658537 bud Gata6 morphant 36.7432 SRR749514 24 hpf normal 36.0511 SRR797911 embryo prdm1-/- 34.4915 SRR749515 24 hpf eif3ha morphant 34.3347 SRR797917 embryo pbx2/4-MO and prdm1-/- 34.3126 SRR941749 anterior pectoral fin normal 34.1745 SRR797908 embryo normal 33.6827 SRR658535 bud Gata5 morphant 33.0194 SRR658539 bud Gata5/6 morphant 32.748000000000005 SRR797914 embryo pbx2/4-MO 31.228 SRR658533 bud normal 28.1397 SRR038624 embryo traf6 morpholino and bacterial infection 27.9505 SRR941753 posterior pectoral fin normal 27.4305 SRR1205154 5dpf transgenic sqET20 23.343000000000004 SRR1569491 embryo normal 23.3284 SRR038626 embryo control morpholino and bacterial infection 23.1819 SRR527833 5 dpf normal 23.0147 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 22.5035 SRR633544 larvae exposed to cold stress 22.3184 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 21.6917 SRR886455 128 cell 4-thio-UTP metabolic labeling 20.9043 SRR1104059 heart kctd10 mut 19.3624 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 19.1677 SRR886456 256 cell 4-thio-UTP metabolic labeling 18.5922 SRR038625 embryo traf6 morpholino 18.3971 SRR1004785 larvae normal 18.3102 SRR1104058 heart normal 17.6019 SRR1021215 sphere stage Mzeomesa 17.5617 SRR1647679 head kidney normal 17.1153 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 16.9857 SRR038627 embryo control morpholino 16.8328 SRR065196 3 dpf normal 16.7677 SRR726542 5 dpf infection with control 16.4101 SRR1021213 sphere stage normal 16.268 SRR1188156 embryo Control PBS 4 hpi 16.1064 SRR1188152 embryo Insulin 0.5 hpi 15.3307 SRR1004786 larvae control morpholino 15.1472 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 14.7743 SRR700537 heart Gata4 morpholino 13.4561 SRR1188148 embryo Control PBS 0.5 hpi 13.0273 SRR886457 512 cell 4-thio-UTP metabolic labeling 12.9254 SRR1004788 larvae impdh1b morpholino 12.5849 SRR527835 tail normal 12.5436 SRR516135 skin male and 5 month 12.5067 SRR1004787 larvae impdh1a morpholino 12.4814 SRR891512 blood normal 12.2504 SRR527834 head normal 11.847000000000001 SRR516123 skin male and 3.5 year 11.8034 SRR065197 3 dpf U1C knockout 11.6538 SRR1647680 head kidney SVCV treatment 11.6165 SRR633550 larvae exposed to hypoxia stress 11.5862 SRR1205160 5dpf transgenic sqET20 and GFP+ 11.1603 SRR633516 larvae normal 11.1458 SRR726540 5 dpf normal 11.0635 SRR1523214 embryo glut12 morpholino 10.6052 SRR1188160 embryo Insulin 4 hpi 10.3094 SRR1523211 embryo control morpholino 10.2008 SRR800049 sphere stage control treatment 9.855189999999999 SRR535986 larvae nhsl1b mut 9.75719 SRR1004789 larvae impdh2 morpholino 9.66456 SRR800043 sphere stage normal 9.575460000000001 SRR592699 pineal gland normal 9.48515 SRR592703 pineal gland normal 9.44658 SRR800037 egg normal 9.3215 SRR516121 skin male and 3.5 year 8.40137 SRR594769 blood normal 8.150360000000001 SRR1565811 brain normal 8.10405 SRR1647681 head kidney SVCV treatment 8.0775 SRR610741 3 dpf express Ras 7.99442 SRR527836 24hpf normal 7.775580000000001 SRR1708343 embryo MUTAS 7.7753 SRR1291417 5 dpi injected marinum 7.624 SRR516127 skin male and 5 month 7.57143 SRR535943 larvae vangl mut 7.4935 SRR726541 5 dpf infection with Mycobacterium marinum 7.385439999999999 SRR535913 larvae krox mut 7.279719999999999 SRR610740 3 dpf normal 7.091539999999999 SRR700534 heart control morpholino 6.99512 SRR1342217 embryo infection with Mycobacterium marinum 6.869339999999999 SRR1291414 5 dpi normal 6.8343300000000005 SRR516133 skin male and 5 month 6.81808 SRR527840 24hpf normal 6.815689999999999 SRR527844 24hpf normal 6.78297 SRR1565809 brain normal 6.71775 SRR516126 skin male and 5 month 6.65458 SRR1565815 brain normal 6.6539600000000005 SRR1167762 embryo ptpn6 morpholino 6.5717300000000005 SRR516125 skin male and 3.5 year 6.50129 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 6.3001 SRR1565805 brain normal 6.21221 SRR519737 2 dpf VD3 treatment 6.20894 SRR592702 pineal gland normal 6.14529 SRR1708345 embryo SIBAS 6.1371 SRR1565819 brain normal 6.13141 SRR1167756 embryo mpeg1 morpholino 6.084280000000001 SRR1028002 head normal 5.9699 SRR1565813 brain normal 5.89941 SRR776508 embryo miR-146 knockdown 5.88267 SRR516132 skin male and 5 month 5.8575800000000005 SRR1565817 brain normal 5.81723 SRR519717 2 dpf FETOH treatment 5.743469999999999 SRR1167757 embryo mpeg1 morpholino and bacterial infection 5.70105 SRR535890 larvae normal 5.5917900000000005 SRR1647682 spleen normal 5.43015 SRR1565807 brain normal 5.37209 SRR535926 larvae normal 5.35332 SRR516130 skin male and 5 month 5.2939099999999994 SRR535849 larvae normal 5.255269999999999 SRR516122 skin male and 3.5 year 5.24567 SRR610742 3 dpf express NICD 5.03897 SRR535978 larvae normal 4.8483 SRR516128 skin male and 5 month 4.81609 SRR776509 embryo Salmonella infected 4.7369699999999995 SRR1048061 pineal gland dark 4.64281 SRR516129 skin male and 5 month 4.63592 SRR514030 retina id2a morpholino 4.62287 SRR535848 larvae hoxb1b mut 4.61627 SRR514028 retina control morpholino 4.55501 SRR1708346 embryo SIBPS 4.41961 SRR1299124 caudal fin Zero day time after treatment 4.354019999999999 SRR1167753 embryo bacterial infection 4.34021 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 4.31537 SRR1028004 head normal 4.30037 SRR1048059 pineal gland light 4.27921 SRR942764 embryo myd88-/- 4.12315 SRR831692 embryo normal 4.11085 SRR1342218 embryo marco morpholino 4.0196 SRR748490 1 kcell normal 4.01891 SRR1299128 caudal fin Three days time after treatment 3.7363699999999995 SRR592701 pineal gland normal 3.71199 SRR1167752 embryo normal 3.5875800000000004 SRR942769 embryo myd88+/+ 3.51778 SRR1534351 larvae 500 ug/l BDE47 treatment 3.3530800000000003 SRR1342216 embryo norml 3.31555 SRR1299127 caudal fin Two days time after treatment 3.25861 SRR592698 pineal gland normal 3.24284 SRR516134 skin male and 5 month 3.23189 SRR1647684 spleen SVCV treatment 3.2063099999999998 SRR535847 larvae normal 3.20512 SRR800046 sphere stage 5azaCyD treatment 3.11879 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.10355 SRR535850 larvae hoxb1b mut 3.09225 SRR519747 6 dpf VD3 treatment 3.06546 SRR516124 skin male and 3.5 year 2.9504200000000003 SRR801556 embryo RPS19 and p53 morpholino 2.9448 SRR630463 5 dpf normal 2.93922 SRR1708344 embryo MUTPS 2.89748 SRR1647683 spleen SVCV treatment 2.77383 SRR776507 embryo normal 2.74153 ERR023144 brain normal 2.72796 SRR1299129 caudal fin Seven days time after treatment 2.67619 SRR1299126 caudal fin One day time after treatment 2.67352 SRR592700 pineal gland normal 2.64283 SRR801555 embryo RPS19 morpholino 2.62811 SRR748489 egg normal 2.62197 SRR519752 7 dpf VD3 treatment 2.61083 SRR519742 4 dpf VD3 treatment 2.59533 SRR800045 muscle normal 2.59028 SRR748488 sperm normal 2.49785 SRR630464 5 dpf injected epidermidis 2.4962299999999997 SRR1562531 muscle normal 2.4791 ERR594417 retina normal 2.47372 SRR1534349 larvae DMSO vehicle 2.46102 SRR535852 larvae hoxb1b mut 2.4374 SRR1299125 caudal fin Half day time after treatment 2.4319900000000003 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 2.40257 SRR519732 7 dpf FETOH treatment 2.3652599999999997 SRR1028003 head normal 2.3237200000000002 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.32048 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.2932900000000003 ERR594418 retina transgenic flk1 and develop tumors 2.29175 SRR776510 embryo Salmonella infected and miR-146 knockdown 2.19507 ERR023145 heart normal 2.1770099999999997 SRR748491 germ ring normal 2.12413 SRR516131 skin male and 5 month 2.09648 SRR1005529 embryo control morpholino 2.05173 SRR801554 embryo control morpholino 2.04865 ERR023146 head kidney normal 2.02392 SRR519722 4 dpf FETOH treatment 1.90625 SRR519727 6 dpf FETOH treatment 1.8621299999999998 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.7958599999999998 SRR1562533 testis normal 1.7782 SRR1562528 eye normal 1.7599599999999997 SRR535851 larvae normal 1.7279799999999998 SRR1005530 embryo RPL11 morpholino 1.69423 ERR594416 retina transgenic flk1 1.64655 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.38921 SRR1039573 gastrointestinal diet 0.75 NPM 1.3176 SRR1562532 spleen normal 1.22438 SRR891504 liver normal 1.20082 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.17804 SRR1035239 liver transgenic mCherry control 1.1558700000000002 SRR891495 heart normal 1.1511 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.0635 SRR1039571 gastrointestinal diet 0.1 NPM 0.994501 SRR1534350 larvae 5 ug/l BDE47 treatment 0.876281 SRR1035237 liver transgenic UHRF1 0.730046 SRR891510 muscle normal 0.709645 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.668613 SRR891511 brain normal 0.578217 SRR1648856 brain normal 0.119567 SRR372796 bud normal 0.09398569999999999 SRR1049814 256 cell normal 0.03758