sample tissue condition fpkm SRR886456 256 cell 4-thio-UTP metabolic labeling 47.8967 SRR886455 128 cell 4-thio-UTP metabolic labeling 37.9543 SRR514028 retina control morpholino 32.4877 SRR514030 retina id2a morpholino 32.2468 SRR519737 2 dpf VD3 treatment 29.5061 SRR519717 2 dpf FETOH treatment 29.1747 SRR1569495 embryo normal 28.4743 SRR886457 512 cell 4-thio-UTP metabolic labeling 28.2 SRR372796 bud normal 26.8163 SRR776507 embryo normal 23.6301 SRR1104058 heart normal 23.23 SRR1104059 heart kctd10 mut 22.195 SRR065196 3 dpf normal 20.601 SRR1569491 embryo normal 20.2391 SRR1021215 sphere stage Mzeomesa 20.1719 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 19.9889 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 19.6489 SRR776508 embryo miR-146 knockdown 19.1396 SRR065197 3 dpf U1C knockout 18.1655 SRR519742 4 dpf VD3 treatment 18.0604 SRR776509 embryo Salmonella infected 17.9513 SRR519722 4 dpf FETOH treatment 17.6474 SRR372793 shield normal 17.4772 SRR1205154 5dpf transgenic sqET20 17.3158 SRR630463 5 dpf normal 16.7552 SRR1021213 sphere stage normal 16.7074 SRR658537 bud Gata6 morphant 16.5517 SRR658539 bud Gata5/6 morphant 16.5324 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 16.2156 ERR594416 retina transgenic flk1 16.1817 SRR797914 embryo pbx2/4-MO 16.156 SRR519732 7 dpf FETOH treatment 16.0988 SRR891495 heart normal 15.9719 SRR038625 embryo traf6 morpholino 15.9378 SRR1291417 5 dpi injected marinum 15.895999999999999 SRR519727 6 dpf FETOH treatment 15.8536 SRR519752 7 dpf VD3 treatment 15.8501 SRR776510 embryo Salmonella infected and miR-146 knockdown 15.8244 SRR891511 brain normal 15.806 SRR594771 endothelium normal 15.7518 SRR630464 5 dpf injected epidermidis 15.7102 SRR797908 embryo normal 15.5206 SRR797911 embryo prdm1-/- 15.3981 SRR038626 embryo control morpholino and bacterial infection 15.31 SRR519747 6 dpf VD3 treatment 15.2942 SRR1291414 5 dpi normal 15.0946 SRR1648854 brain normal 15.0665 SRR038624 embryo traf6 morpholino and bacterial infection 14.9736 SRR1167756 embryo mpeg1 morpholino 14.9131 SRR038627 embryo control morpholino 14.8546 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 14.6906 SRR797917 embryo pbx2/4-MO and prdm1-/- 14.6667 SRR1648855 brain normal 14.5712 SRR633544 larvae exposed to cold stress 14.3877 ERR594417 retina normal 14.214 SRR1565809 brain normal 14.2087 ERR594418 retina transgenic flk1 and develop tumors 14.1254 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 14.1056 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 14.0665 SRR372800 2 dpf normal 13.9152 SRR372791 dome normal 13.8869 SRR1523211 embryo control morpholino 13.7901 SRR1167762 embryo ptpn6 morpholino 13.7493 SRR1565811 brain normal 13.7337 SRR610742 3 dpf express NICD 13.6019 SRR658533 bud normal 13.4529 SRR1299124 caudal fin Zero day time after treatment 13.364 SRR527832 16-36 hpf normal 13.3279 SRR1188160 embryo Insulin 4 hpi 13.1908 SRR1167753 embryo bacterial infection 13.1905 SRR1048059 pineal gland light 13.1594 SRR1647682 spleen normal 13.0378 SRR1562528 eye normal 13.0213 SRR658535 bud Gata5 morphant 12.9279 SRR1523214 embryo glut12 morpholino 12.8711 SRR1167752 embryo normal 12.7793 SRR1188148 embryo Control PBS 0.5 hpi 12.7157 SRR1342216 embryo norml 12.6222 SRR1167763 embryo ptpn6 morpholino and bacterial infection 12.4733 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 12.4567 SRR527833 5 dpf normal 12.4231 SRR658547 6 somite Gata5/6 morphant 12.3974 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 12.3908 SRR726541 5 dpf infection with Mycobacterium marinum 12.3612 SRR1048061 pineal gland dark 12.3235 SRR527840 24hpf normal 12.2768 SRR516123 skin male and 3.5 year 12.2599 SRR1188152 embryo Insulin 0.5 hpi 12.2453 SRR942769 embryo myd88+/+ 12.1903 SRR1188156 embryo Control PBS 4 hpi 12.1399 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 12.1347 SRR372798 28 hpf normal 12.1313 SRR1565819 brain normal 12.1264 SRR658545 6 somite Gata6 morphant 12.03 SRR535913 larvae krox mut 12.0204 SRR1565815 brain normal 11.9456 SRR1205160 5dpf transgenic sqET20 and GFP+ 11.9295 SRR535890 larvae normal 11.8923 SRR1565805 brain normal 11.7949 SRR1167757 embryo mpeg1 morpholino and bacterial infection 11.786 SRR942764 embryo myd88-/- 11.7349 SRR1565807 brain normal 11.6987 SRR1565817 brain normal 11.6505 SRR527835 tail normal 11.623 SRR592703 pineal gland normal 11.5471 SRR658541 6 somite normal 11.5429 SRR610740 3 dpf normal 11.5123 SRR535986 larvae nhsl1b mut 11.4137 SRR535926 larvae normal 11.3795 SRR831692 embryo normal 11.3616 SRR592700 pineal gland normal 11.343 SRR1004788 larvae impdh1b morpholino 11.3415 SRR957181 heart normal 11.2884 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 11.173 SRR1565813 brain normal 11.1572 SRR592698 pineal gland normal 11.1149 SRR748491 germ ring normal 11.0792 SRR726542 5 dpf infection with control 11.0709 SRR1562531 muscle normal 11.0664 SRR1708345 embryo SIBAS 11.0607 SRR535943 larvae vangl mut 10.957 SRR726540 5 dpf normal 10.8637 SRR941749 anterior pectoral fin normal 10.8396 SRR535848 larvae hoxb1b mut 10.7861 SRR941753 posterior pectoral fin normal 10.7219 SRR1648856 brain normal 10.7169 SRR535850 larvae hoxb1b mut 10.5989 SRR1708343 embryo MUTAS 10.5935 SRR516125 skin male and 3.5 year 10.4317 SRR516121 skin male and 3.5 year 10.3795 SRR535851 larvae normal 10.3652 SRR633550 larvae exposed to hypoxia stress 10.3122 SRR1647684 spleen SVCV treatment 10.3009 SRR535978 larvae normal 10.3004 SRR1342217 embryo infection with Mycobacterium marinum 10.2642 SRR1004785 larvae normal 10.2323 SRR1299128 caudal fin Three days time after treatment 10.2255 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 10.1312 SRR957180 heart 7 days after heart tip amputation 10.1035 SRR1342218 embryo marco morpholino 10.0782 SRR592699 pineal gland normal 9.95705 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 9.95295 SRR535847 larvae normal 9.79932 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 9.68706 SRR1299126 caudal fin One day time after treatment 9.60672 SRR1647683 spleen SVCV treatment 9.361289999999999 SRR592701 pineal gland normal 9.3501 SRR1299129 caudal fin Seven days time after treatment 9.22074 SRR1708346 embryo SIBPS 9.19692 ERR023144 brain normal 9.14445 SRR516122 skin male and 3.5 year 9.12998 SRR1299125 caudal fin Half day time after treatment 9.066 SRR527836 24hpf normal 9.04137 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 8.82355 SRR516126 skin male and 5 month 8.82187 SRR535852 larvae hoxb1b mut 8.801910000000001 SRR592702 pineal gland normal 8.80091 SRR1035978 13 hpf rx3-/- 8.77267 SRR1299127 caudal fin Two days time after treatment 8.72712 SRR1534349 larvae DMSO vehicle 8.48678 SRR658543 6 somite Gata5 morphan 8.46065 SRR748490 1 kcell normal 8.41972 SRR1562532 spleen normal 8.3897 SRR535849 larvae normal 8.2254 SRR372789 1K cell normal 7.93095 SRR516127 skin male and 5 month 7.849239999999999 SRR700537 heart Gata4 morpholino 7.835319999999999 SRR1035981 13 hpf rx3+/+ or rx3+/- 7.824319999999999 SRR1028004 head normal 7.77509 SRR1004789 larvae impdh2 morpholino 7.7154 SRR1534350 larvae 5 ug/l BDE47 treatment 7.670910000000001 SRR1004786 larvae control morpholino 7.62565 SRR372802 5 dpf normal 7.617039999999999 SRR516128 skin male and 5 month 7.54661 SRR1004787 larvae impdh1a morpholino 7.50393 SRR633516 larvae normal 7.410839999999999 SRR749515 24 hpf eif3ha morphant 7.35303 SRR527844 24hpf normal 7.3063199999999995 SRR516124 skin male and 3.5 year 7.252439999999999 SRR527834 head normal 7.07313 SRR516134 skin male and 5 month 7.06424 SRR516133 skin male and 5 month 6.95684 SRR610741 3 dpf express Ras 6.88087 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 6.851660000000001 SRR372787 2-4 cell normal 6.791119999999999 SRR594769 blood normal 6.7414 SRR1708344 embryo MUTPS 6.72703 SRR891512 blood normal 6.65344 SRR1647679 head kidney normal 6.55618 SRR801556 embryo RPS19 and p53 morpholino 6.509119999999999 SRR1028003 head normal 6.46131 SRR516129 skin male and 5 month 6.42059 SRR891510 muscle normal 6.271 SRR700534 heart control morpholino 6.10323 SRR1028002 head normal 5.93923 SRR749514 24 hpf normal 5.893669999999999 SRR516131 skin male and 5 month 5.86444 SRR516132 skin male and 5 month 5.8282 SRR1647680 head kidney SVCV treatment 5.78987 SRR516135 skin male and 5 month 5.75774 ERR023143 swim bladder normal 5.571940000000001 SRR1534351 larvae 500 ug/l BDE47 treatment 5.51124 SRR516130 skin male and 5 month 5.39974 SRR1035984 13 hpf normal 5.06286 SRR801555 embryo RPS19 morpholino 5.01275 SRR1005529 embryo control morpholino 4.97532 SRR801554 embryo control morpholino 4.96657 SRR748488 sperm normal 4.83105 SRR1562533 testis normal 4.58887 SRR748489 egg normal 4.54344 SRR1647681 head kidney SVCV treatment 4.459230000000001 SRR1039571 gastrointestinal diet 0.1 NPM 4.27918 SRR1005530 embryo RPL11 morpholino 4.13037 SRR1035239 liver transgenic mCherry control 3.5531699999999997 SRR1035237 liver transgenic UHRF1 3.50558 SRR1562529 intestine and pancreas normal 3.39975 SRR1562530 liver normal 3.35351 SRR1621206 embryo normal 3.2919699999999996 ERR023145 heart normal 3.04754 SRR1049814 256 cell normal 3.03343 SRR1039573 gastrointestinal diet 0.75 NPM 2.82804 ERR023146 head kidney normal 2.78923 SRR891504 liver normal 2.33712 SRR800045 muscle normal 1.21859 SRR800049 sphere stage control treatment 0.102255 SRR800037 egg normal 0.000116178 SRR800046 sphere stage 5azaCyD treatment 5.68211e-05 SRR800043 sphere stage normal 2.5248000000000003e-05