sample tissue condition fpkm SRR1035239 liver transgenic mCherry control 105.258 SRR1562530 liver normal 22.6493 SRR516121 skin male and 3.5 year 14.5001 SRR516129 skin male and 5 month 12.58 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 10.6527 SRR941749 anterior pectoral fin normal 10.5446 SRR1039571 gastrointestinal diet 0.1 NPM 9.80746 SRR941753 posterior pectoral fin normal 9.75865 SRR519747 6 dpf VD3 treatment 9.721589999999999 SRR516122 skin male and 3.5 year 9.23449 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 9.016 SRR519732 7 dpf FETOH treatment 8.99264 SRR1291414 5 dpi normal 8.79549 SRR519727 6 dpf FETOH treatment 8.63331 SRR516123 skin male and 3.5 year 8.33506 SRR516125 skin male and 3.5 year 8.26435 SRR1205160 5dpf transgenic sqET20 and GFP+ 8.24269 SRR519752 7 dpf VD3 treatment 8.18463 SRR1299124 caudal fin Zero day time after treatment 7.219760000000001 SRR516127 skin male and 5 month 7.13082 SRR516126 skin male and 5 month 7.0929899999999995 SRR1647682 spleen normal 7.013439999999999 SRR1035237 liver transgenic UHRF1 6.914619999999999 SRR1039573 gastrointestinal diet 0.75 NPM 6.7672 SRR891510 muscle normal 6.35879 SRR516134 skin male and 5 month 6.3055 SRR1188148 embryo Control PBS 0.5 hpi 6.29514 SRR1562533 testis normal 6.276269999999999 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 6.1256900000000005 SRR1534351 larvae 500 ug/l BDE47 treatment 5.77159 SRR1562532 spleen normal 5.43993 SRR630463 5 dpf normal 5.35813 SRR1534350 larvae 5 ug/l BDE47 treatment 5.30932 SRR630464 5 dpf injected epidermidis 5.18953 SRR748488 sperm normal 5.179880000000001 SRR1342218 embryo marco morpholino 5.09321 SRR1648854 brain normal 5.00729 SRR1342216 embryo norml 4.99286 SRR942764 embryo myd88-/- 4.8783199999999995 SRR535850 larvae hoxb1b mut 4.851319999999999 SRR800045 muscle normal 4.82227 SRR1562531 muscle normal 4.816319999999999 SRR1648856 brain normal 4.63659 SRR519742 4 dpf VD3 treatment 4.55886 SRR1291417 5 dpi injected marinum 4.55353 SRR1167752 embryo normal 4.519340000000001 SRR527834 head normal 4.4911900000000005 SRR516135 skin male and 5 month 4.48639 SRR1342217 embryo infection with Mycobacterium marinum 4.35211 SRR1167753 embryo bacterial infection 4.3323599999999995 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 4.3006 SRR891504 liver normal 4.28003 SRR1534349 larvae DMSO vehicle 4.243040000000001 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 4.17824 SRR1299126 caudal fin One day time after treatment 4.1235800000000005 SRR592700 pineal gland normal 4.03431 SRR1188156 embryo Control PBS 4 hpi 3.8918 SRR516131 skin male and 5 month 3.8158 SRR592702 pineal gland normal 3.75181 SRR726540 5 dpf normal 3.70915 SRR535847 larvae normal 3.70315 SRR891511 brain normal 3.5921199999999995 SRR942769 embryo myd88+/+ 3.58059 SRR516132 skin male and 5 month 3.5225800000000005 SRR1562529 intestine and pancreas normal 3.4469 SRR535943 larvae vangl mut 3.33544 ERR023145 heart normal 3.3204599999999997 SRR726542 5 dpf infection with control 3.31737 ERR023146 head kidney normal 3.29561 SRR1167756 embryo mpeg1 morpholino 3.26009 SRR1647681 head kidney SVCV treatment 3.2479400000000003 SRR1048059 pineal gland light 3.1295 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.12719 SRR535852 larvae hoxb1b mut 3.10175 SRR519722 4 dpf FETOH treatment 3.04399 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.0071 SRR535849 larvae normal 2.99974 SRR527836 24hpf normal 2.94863 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.8249299999999997 SRR535848 larvae hoxb1b mut 2.80957 SRR535986 larvae nhsl1b mut 2.77117 SRR535913 larvae krox mut 2.7074 SRR610741 3 dpf express Ras 2.64149 SRR1188152 embryo Insulin 0.5 hpi 2.61032 SRR535851 larvae normal 2.57265 SRR1523211 embryo control morpholino 2.54937 SRR516128 skin male and 5 month 2.54077 SRR535926 larvae normal 2.46919 SRR516133 skin male and 5 month 2.46157 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.4383 SRR516124 skin male and 3.5 year 2.43201 SRR1188160 embryo Insulin 4 hpi 2.4138 SRR610742 3 dpf express NICD 2.4136900000000003 SRR831692 embryo normal 2.38176 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2.30982 SRR527833 5 dpf normal 2.30671 SRR610740 3 dpf normal 2.2682900000000004 SRR1647683 spleen SVCV treatment 2.13143 SRR891512 blood normal 2.12279 SRR1647680 head kidney SVCV treatment 2.11122 SRR1167762 embryo ptpn6 morpholino 2.10003 SRR1299125 caudal fin Half day time after treatment 2.0504700000000002 SRR527835 tail normal 1.98658 SRR1562528 eye normal 1.97557 SRR1028002 head normal 1.97468 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.9325 SRR1028004 head normal 1.86464 SRR372802 5 dpf normal 1.7926799999999998 SRR519717 2 dpf FETOH treatment 1.7873900000000003 SRR065197 3 dpf U1C knockout 1.7774400000000001 SRR519737 2 dpf VD3 treatment 1.75069 SRR1523214 embryo glut12 morpholino 1.7113599999999998 ERR023143 swim bladder normal 1.6623400000000002 SRR535978 larvae normal 1.60921 SRR957181 heart normal 1.56552 SRR535890 larvae normal 1.56528 SRR633544 larvae exposed to cold stress 1.54918 SRR1299129 caudal fin Seven days time after treatment 1.54792 SRR633550 larvae exposed to hypoxia stress 1.44479 SRR633516 larvae normal 1.42936 SRR957180 heart 7 days after heart tip amputation 1.42201 SRR726541 5 dpf infection with Mycobacterium marinum 1.3875 SRR516130 skin male and 5 month 1.37534 SRR372798 28 hpf normal 1.34398 SRR1647679 head kidney normal 1.26577 SRR1004788 larvae impdh1b morpholino 1.16459 SRR748489 egg normal 1.1584 SRR1028003 head normal 1.12588 SRR372800 2 dpf normal 1.12532 SRR891495 heart normal 1.10317 SRR1205154 5dpf transgenic sqET20 1.06108 SRR1648855 brain normal 1.01581 SRR065196 3 dpf normal 1.00318 SRR1004786 larvae control morpholino 0.9883270000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.978576 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.95883 SRR527840 24hpf normal 0.8925290000000001 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.886748 ERR594416 retina transgenic flk1 0.8773770000000001 SRR749514 24 hpf normal 0.86546 ERR023144 brain normal 0.84129 SRR592703 pineal gland normal 0.810893 SRR1647684 spleen SVCV treatment 0.800467 SRR1708344 embryo MUTPS 0.7877430000000001 SRR700537 heart Gata4 morpholino 0.753454 SRR527832 16-36 hpf normal 0.738167 SRR749515 24 hpf eif3ha morphant 0.716458 SRR1048061 pineal gland dark 0.70016 SRR1004789 larvae impdh2 morpholino 0.699483 SRR038625 embryo traf6 morpholino 0.654629 SRR1299128 caudal fin Three days time after treatment 0.650115 SRR592701 pineal gland normal 0.5931890000000001 SRR594771 endothelium normal 0.567293 SRR1708346 embryo SIBPS 0.560629 SRR776508 embryo miR-146 knockdown 0.532767 SRR1104058 heart normal 0.523809 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.499277 SRR776507 embryo normal 0.489396 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.48063199999999995 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.404618 SRR1104059 heart kctd10 mut 0.370759 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.32376 SRR1004787 larvae impdh1a morpholino 0.308254 SRR776509 embryo Salmonella infected 0.300575 SRR1565817 brain normal 0.287367 SRR797908 embryo normal 0.275122 SRR800043 sphere stage normal 0.274456 SRR1565809 brain normal 0.269148 SRR592698 pineal gland normal 0.263457 SRR592699 pineal gland normal 0.261048 SRR1708345 embryo SIBAS 0.25464000000000003 SRR658541 6 somite normal 0.237997 SRR527844 24hpf normal 0.235246 SRR658539 bud Gata5/6 morphant 0.22454899999999997 SRR658545 6 somite Gata6 morphant 0.224173 SRR1708343 embryo MUTAS 0.222387 SRR1565811 brain normal 0.220502 SRR514028 retina control morpholino 0.21366500000000002 SRR038624 embryo traf6 morpholino and bacterial infection 0.210022 SRR038626 embryo control morpholino and bacterial infection 0.206083 SRR658543 6 somite Gata5 morphan 0.205416 SRR797914 embryo pbx2/4-MO 0.203963 SRR1565819 brain normal 0.18725 SRR1035978 13 hpf rx3-/- 0.173802 SRR658533 bud normal 0.17144500000000001 SRR748491 germ ring normal 0.158156 SRR1299127 caudal fin Two days time after treatment 0.15745399999999998 SRR658547 6 somite Gata5/6 morphant 0.155862 SRR748490 1 kcell normal 0.146135 SRR1565807 brain normal 0.13992000000000002 SRR797911 embryo prdm1-/- 0.130249 ERR594417 retina normal 0.118623 SRR1004785 larvae normal 0.0964839 SRR658537 bud Gata6 morphant 0.0858141 SRR1565813 brain normal 0.082772 SRR372791 dome normal 0.07240260000000001 SRR1565815 brain normal 0.06307080000000001 SRR1565805 brain normal 0.0626051 SRR372796 bud normal 0.0344827 SRR372787 2-4 cell normal 0.0308707 SRR1021215 sphere stage Mzeomesa 0.0280873 SRR372789 1K cell normal 0.027993999999999998 SRR1021213 sphere stage normal 0.0273825 SRR1049814 256 cell normal 0.0238475 SRR1621206 embryo normal 0.022453 ERR594418 retina transgenic flk1 and develop tumors 0.0216269 SRR372793 shield normal 0.0197343 SRR800037 egg normal 0.000201098