sample tissue condition fpkm SRR1035239 liver transgenic mCherry control 1949.02 SRR1562530 liver normal 1546.88 SRR1039571 gastrointestinal diet 0.1 NPM 1149.08 ERR023146 head kidney normal 1101.9 SRR1039573 gastrointestinal diet 0.75 NPM 1086.41 SRR891504 liver normal 1038.75 SRR1562529 intestine and pancreas normal 629.738 SRR1035237 liver transgenic UHRF1 463.495 SRR1562532 spleen normal 249.40900000000002 SRR1647680 head kidney SVCV treatment 175.24200000000002 SRR519727 6 dpf FETOH treatment 158.381 SRR1534351 larvae 500 ug/l BDE47 treatment 149.018 SRR1647681 head kidney SVCV treatment 134.454 SRR519732 7 dpf FETOH treatment 127.37299999999999 SRR1534350 larvae 5 ug/l BDE47 treatment 119.26100000000001 SRR519747 6 dpf VD3 treatment 109.036 SRR1647679 head kidney normal 106.01299999999999 SRR1534349 larvae DMSO vehicle 98.3665 SRR1188148 embryo Control PBS 0.5 hpi 90.5209 SRR630464 5 dpf injected epidermidis 89.9237 SRR1291414 5 dpi normal 86.4469 SRR372802 5 dpf normal 82.4272 SRR1028003 head normal 80.7122 SRR630463 5 dpf normal 77.4359 SRR535850 larvae hoxb1b mut 72.1574 SRR535852 larvae hoxb1b mut 71.9206 SRR726540 5 dpf normal 70.8099 SRR1188156 embryo Control PBS 4 hpi 70.5804 SRR535848 larvae hoxb1b mut 65.6949 SRR1028002 head normal 65.6492 SRR1004788 larvae impdh1b morpholino 65.6005 SRR535847 larvae normal 64.1732 SRR1167753 embryo bacterial infection 61.5302 SRR519752 7 dpf VD3 treatment 60.7489 SRR1188152 embryo Insulin 0.5 hpi 60.5687 SRR519722 4 dpf FETOH treatment 59.1207 SRR519742 4 dpf VD3 treatment 58.7975 SRR1342218 embryo marco morpholino 58.3002 SRR535849 larvae normal 58.2565 SRR1188160 embryo Insulin 4 hpi 58.1356 SRR1342216 embryo norml 57.5548 SRR726542 5 dpf infection with control 57.5377 SRR535851 larvae normal 56.5054 SRR1004786 larvae control morpholino 54.8079 SRR1028004 head normal 53.5184 SRR1342217 embryo infection with Mycobacterium marinum 49.858000000000004 SRR527833 5 dpf normal 49.3403 SRR527840 24hpf normal 47.3343 SRR1004787 larvae impdh1a morpholino 47.2022 SRR372800 2 dpf normal 47.0525 SRR1523211 embryo control morpholino 46.9864 SRR1004785 larvae normal 44.8007 SRR372798 28 hpf normal 44.2366 SRR1004789 larvae impdh2 morpholino 42.5511 SRR610740 3 dpf normal 42.1195 ERR023145 heart normal 40.8358 ERR023143 swim bladder normal 40.7831 SRR527836 24hpf normal 40.361999999999995 SRR1167752 embryo normal 40.0505 SRR1291417 5 dpi injected marinum 39.7112 SRR527834 head normal 39.391 SRR1523214 embryo glut12 morpholino 39.0204 SRR610741 3 dpf express Ras 37.6258 SRR527835 tail normal 37.3668 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 37.24 SRR942769 embryo myd88+/+ 35.6543 SRR527844 24hpf normal 35.36 SRR535890 larvae normal 34.2804 SRR749514 24 hpf normal 33.7325 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 33.6021 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 33.4975 SRR891510 muscle normal 33.0873 SRR535943 larvae vangl mut 30.6435 SRR633544 larvae exposed to cold stress 30.4987 SRR797908 embryo normal 27.9129 SRR633550 larvae exposed to hypoxia stress 26.8141 SRR1005529 embryo control morpholino 26.339000000000002 SRR801554 embryo control morpholino 26.3016 SRR633516 larvae normal 26.1636 SRR610742 3 dpf express NICD 26.0266 SRR942764 embryo myd88-/- 24.8268 SRR1647682 spleen normal 23.6563 SRR797911 embryo prdm1-/- 23.5342 SRR1005530 embryo RPL11 morpholino 23.3646 SRR535986 larvae nhsl1b mut 23.3596 SRR535926 larvae normal 22.7161 SRR535913 larvae krox mut 22.4749 SRR1167756 embryo mpeg1 morpholino 22.3616 SRR1167757 embryo mpeg1 morpholino and bacterial infection 22.0221 SRR797914 embryo pbx2/4-MO 21.1915 SRR797917 embryo pbx2/4-MO and prdm1-/- 20.8423 SRR658543 6 somite Gata5 morphan 20.6509 SRR831692 embryo normal 19.8974 SRR1167762 embryo ptpn6 morpholino 19.7827 SRR1647683 spleen SVCV treatment 19.3816 SRR527832 16-36 hpf normal 19.2427 SRR038624 embryo traf6 morpholino and bacterial infection 19.1018 SRR535978 larvae normal 19.0893 SRR801556 embryo RPS19 and p53 morpholino 18.6618 SRR1167763 embryo ptpn6 morpholino and bacterial infection 18.1549 SRR1562528 eye normal 17.671 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 17.3652 SRR519737 2 dpf VD3 treatment 17.2534 SRR658547 6 somite Gata5/6 morphant 15.5174 SRR519717 2 dpf FETOH treatment 14.8219 SRR749515 24 hpf eif3ha morphant 14.5853 SRR516135 skin male and 5 month 14.2361 SRR038626 embryo control morpholino and bacterial infection 13.1012 SRR1708344 embryo MUTPS 12.5676 SRR1647684 spleen SVCV treatment 12.55 SRR801555 embryo RPS19 morpholino 12.3945 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 11.6796 SRR1708346 embryo SIBPS 10.9508 SRR516133 skin male and 5 month 10.8128 SRR1648854 brain normal 10.7389 SRR1648856 brain normal 9.144169999999999 SRR1104059 heart kctd10 mut 8.92607 SRR1035978 13 hpf rx3-/- 8.88132 SRR700537 heart Gata4 morpholino 8.581439999999999 SRR658545 6 somite Gata6 morphant 8.35755 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 7.678939999999999 SRR038627 embryo control morpholino 7.613410000000001 SRR038625 embryo traf6 morpholino 7.438339999999999 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 7.23685 SRR1205154 5dpf transgenic sqET20 6.933610000000001 SRR658541 6 somite normal 6.788930000000001 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 6.68737 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 6.4076699999999995 SRR1104058 heart normal 6.328119999999999 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 5.66576 SRR658533 bud normal 5.58091 SRR516128 skin male and 5 month 5.57367 SRR776507 embryo normal 5.07979 SRR1562533 testis normal 5.05037 SRR594771 endothelium normal 5.0362800000000005 SRR065197 3 dpf U1C knockout 4.9134199999999995 SRR776508 embryo miR-146 knockdown 4.8604 SRR800045 muscle normal 4.83876 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 4.65564 SRR1708345 embryo SIBAS 4.65024 SRR700534 heart control morpholino 4.3808300000000004 SRR1205160 5dpf transgenic sqET20 and GFP+ 4.20622 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.66305 SRR658535 bud Gata5 morphant 3.53102 SRR776509 embryo Salmonella infected 3.38021 SRR1708343 embryo MUTAS 3.21063 SRR372796 bud normal 3.0899400000000004 SRR516124 skin male and 3.5 year 2.59963 SRR594769 blood normal 2.58459 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.57976 SRR891511 brain normal 2.5261299999999998 SRR776510 embryo Salmonella infected and miR-146 knockdown 2.24172 SRR1035984 13 hpf normal 1.97185 SRR065196 3 dpf normal 1.86532 SRR658537 bud Gata6 morphant 1.8406099999999999 SRR941749 anterior pectoral fin normal 1.70658 SRR658539 bud Gata5/6 morphant 1.61395 SRR514030 retina id2a morpholino 1.58336 SRR891512 blood normal 1.4452200000000002 SRR1562531 muscle normal 1.24086 SRR516126 skin male and 5 month 1.21004 SRR891495 heart normal 1.1980600000000001 SRR941753 posterior pectoral fin normal 1.18413 SRR1648855 brain normal 1.17089 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.16255 SRR1299126 caudal fin One day time after treatment 0.9511069999999999 SRR748488 sperm normal 0.9277549999999999 SRR516125 skin male and 3.5 year 0.912101 SRR514028 retina control morpholino 0.904332 SRR1299125 caudal fin Half day time after treatment 0.8985620000000001 SRR516131 skin male and 5 month 0.8675860000000001 SRR592698 pineal gland normal 0.8262790000000001 ERR023144 brain normal 0.807959 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.8073819999999999 SRR1569491 embryo normal 0.76662 SRR1299127 caudal fin Two days time after treatment 0.726532 ERR594416 retina transgenic flk1 0.708479 SRR1299128 caudal fin Three days time after treatment 0.687821 SRR1569495 embryo normal 0.6684829999999999 SRR592699 pineal gland normal 0.6601819999999999 ERR594417 retina normal 0.6545489999999999 ERR594418 retina transgenic flk1 and develop tumors 0.633343 SRR1565809 brain normal 0.618082 SRR1565819 brain normal 0.59622 SRR1565817 brain normal 0.5719529999999999 SRR516129 skin male and 5 month 0.564423 SRR1565811 brain normal 0.553994 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.5010100000000001 SRR516123 skin male and 3.5 year 0.468592 SRR957181 heart normal 0.433072 SRR1565805 brain normal 0.40934299999999996 SRR1299129 caudal fin Seven days time after treatment 0.397675 SRR516121 skin male and 3.5 year 0.392439 SRR1565815 brain normal 0.38663400000000003 SRR516122 skin male and 3.5 year 0.380972 SRR957180 heart 7 days after heart tip amputation 0.36231199999999997 SRR1565807 brain normal 0.35679099999999997 SRR516127 skin male and 5 month 0.356089 SRR1565813 brain normal 0.350016 SRR800046 sphere stage 5azaCyD treatment 0.316158 SRR800049 sphere stage control treatment 0.306289 SRR516130 skin male and 5 month 0.29087399999999997 SRR1048061 pineal gland dark 0.283237 SRR592702 pineal gland normal 0.264957 SRR516134 skin male and 5 month 0.220813 SRR592703 pineal gland normal 0.201328 SRR592700 pineal gland normal 0.196616 SRR800043 sphere stage normal 0.19347899999999998 SRR592701 pineal gland normal 0.175771 SRR372793 shield normal 0.164801 SRR1299124 caudal fin Zero day time after treatment 0.156085 SRR726541 5 dpf infection with Mycobacterium marinum 0.149503 SRR1048059 pineal gland light 0.127742 SRR800037 egg normal 0.117976 SRR748491 germ ring normal 0.09281460000000001 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.09117839999999999 SRR372789 1K cell normal 0.0852688 SRR1021213 sphere stage normal 0.0707865 SRR372791 dome normal 0.05858390000000001 SRR516132 skin male and 5 month 0.054800800000000004 SRR1021215 sphere stage Mzeomesa 0.0514336 SRR1621206 embryo normal 0.0435323 SRR1049814 256 cell normal 0.0312366 SRR748490 1 kcell normal 0.029901599999999997 SRR372787 2-4 cell normal 0.023129900000000002