sample tissue condition fpkm SRR658543 6 somite Gata5 morphan 13.6655 SRR658545 6 somite Gata6 morphant 11.3649 SRR658535 bud Gata5 morphant 11.0404 SRR658541 6 somite normal 9.66267 SRR658539 bud Gata5/6 morphant 9.31348 SRR658547 6 somite Gata5/6 morphant 8.90236 SRR519727 6 dpf FETOH treatment 8.29304 SRR594771 endothelium normal 7.594760000000001 SRR519747 6 dpf VD3 treatment 7.38495 SRR891504 liver normal 7.292839999999999 SRR519752 7 dpf VD3 treatment 7.2689699999999995 SRR527833 5 dpf normal 7.24193 SRR519742 4 dpf VD3 treatment 6.929060000000001 SRR658533 bud normal 6.889589999999999 SRR519732 7 dpf FETOH treatment 6.68202 SRR519722 4 dpf FETOH treatment 6.55075 SRR527834 head normal 6.46353 SRR519717 2 dpf FETOH treatment 6.3903 SRR1039573 gastrointestinal diet 0.75 NPM 6.331519999999999 SRR372796 bud normal 6.3183 SRR038625 embryo traf6 morpholino 6.28709 SRR941753 posterior pectoral fin normal 6.16561 SRR726542 5 dpf infection with control 5.9463 SRR038624 embryo traf6 morpholino and bacterial infection 5.73637 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 5.68766 SRR519737 2 dpf VD3 treatment 5.5874 SRR941749 anterior pectoral fin normal 5.489719999999999 SRR658537 bud Gata6 morphant 5.43107 SRR516129 skin male and 5 month 5.18549 SRR038626 embryo control morpholino and bacterial infection 5.106669999999999 SRR065197 3 dpf U1C knockout 5.08144 SRR957180 heart 7 days after heart tip amputation 5.07974 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 4.87167 SRR1205160 5dpf transgenic sqET20 and GFP+ 4.63323 SRR594769 blood normal 4.53226 SRR516135 skin male and 5 month 4.1987 SRR038627 embryo control morpholino 4.18794 SRR749514 24 hpf normal 4.170030000000001 SRR726541 5 dpf infection with Mycobacterium marinum 4.03822 SRR527832 16-36 hpf normal 4.00028 SRR957181 heart normal 3.9974300000000005 SRR516131 skin male and 5 month 3.9812300000000005 SRR891510 muscle normal 3.8708699999999996 SRR1647680 head kidney SVCV treatment 3.52716 SRR633516 larvae normal 3.52031 SRR700537 heart Gata4 morpholino 3.3414699999999997 SRR516123 skin male and 3.5 year 3.2892 SRR1028004 head normal 3.17207 SRR1647679 head kidney normal 3.1633400000000003 SRR065196 3 dpf normal 3.065 SRR535849 larvae normal 2.86128 SRR749515 24 hpf eif3ha morphant 2.8198 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.65967 SRR700534 heart control morpholino 2.65738 SRR592703 pineal gland normal 2.45697 SRR516125 skin male and 3.5 year 2.43604 SRR1188152 embryo Insulin 0.5 hpi 2.4085900000000002 SRR516127 skin male and 5 month 2.396 SRR1188156 embryo Control PBS 4 hpi 2.39361 SRR592699 pineal gland normal 2.3254 SRR1167756 embryo mpeg1 morpholino 2.2927299999999997 SRR1342216 embryo norml 2.26979 SRR633550 larvae exposed to hypoxia stress 2.19161 SRR1647681 head kidney SVCV treatment 2.16472 SRR1188148 embryo Control PBS 0.5 hpi 2.15082 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.13076 SRR1188160 embryo Insulin 4 hpi 2.1210400000000003 SRR372800 2 dpf normal 2.1055099999999998 SRR1104059 heart kctd10 mut 2.07666 SRR633544 larvae exposed to cold stress 2.0693900000000003 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.99968 SRR891512 blood normal 1.9724099999999998 SRR1299125 caudal fin Half day time after treatment 1.96807 SRR891495 heart normal 1.9573200000000002 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.87808 SRR726540 5 dpf normal 1.8410400000000002 SRR610740 3 dpf normal 1.84067 SRR797914 embryo pbx2/4-MO 1.83742 SRR372793 shield normal 1.78981 SRR1647683 spleen SVCV treatment 1.7788400000000002 SRR535913 larvae krox mut 1.74292 SRR516121 skin male and 3.5 year 1.73433 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.6885599999999998 SRR1035978 13 hpf rx3-/- 1.6483400000000001 SRR527840 24hpf normal 1.6314899999999999 SRR1028003 head normal 1.58936 SRR535851 larvae normal 1.57981 SRR1299126 caudal fin One day time after treatment 1.57518 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.57125 SRR1299124 caudal fin Zero day time after treatment 1.54945 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.54383 SRR372798 28 hpf normal 1.5273 SRR1562530 liver normal 1.52373 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.51181 SRR516134 skin male and 5 month 1.49458 SRR1028002 head normal 1.4939200000000001 SRR1035984 13 hpf normal 1.49234 SRR535852 larvae hoxb1b mut 1.47832 SRR1039571 gastrointestinal diet 0.1 NPM 1.46276 SRR516126 skin male and 5 month 1.41299 SRR1167762 embryo ptpn6 morpholino 1.39432 SRR527835 tail normal 1.35369 SRR592701 pineal gland normal 1.31265 SRR1004785 larvae normal 1.30976 SRR535850 larvae hoxb1b mut 1.2987799999999998 SRR1004788 larvae impdh1b morpholino 1.28636 SRR630464 5 dpf injected epidermidis 1.27525 SRR1167752 embryo normal 1.22339 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.21561 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.21371 SRR1342218 embryo marco morpholino 1.18456 SRR516133 skin male and 5 month 1.1840899999999999 SRR1035239 liver transgenic mCherry control 1.1517700000000002 SRR527836 24hpf normal 1.1451 SRR535848 larvae hoxb1b mut 1.1228200000000002 SRR1299129 caudal fin Seven days time after treatment 1.08277 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.08145 SRR1004786 larvae control morpholino 1.06481 SRR610742 3 dpf express NICD 1.05744 SRR592698 pineal gland normal 1.04156 SRR1562531 muscle normal 1.0270299999999999 SRR1104058 heart normal 1.0220799999999999 SRR372791 dome normal 1.0165799999999998 SRR1569495 embryo normal 1.00852 SRR1523214 embryo glut12 morpholino 1.0052 SRR527844 24hpf normal 0.994682 SRR592702 pineal gland normal 0.993506 SRR1291417 5 dpi injected marinum 0.973676 SRR516130 skin male and 5 month 0.954291 SRR942764 embryo myd88-/- 0.9469700000000001 SRR372802 5 dpf normal 0.9435879999999999 SRR1562529 intestine and pancreas normal 0.9375319999999999 SRR610741 3 dpf express Ras 0.9354049999999999 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.9303870000000001 SRR1523211 embryo control morpholino 0.925645 SRR1167753 embryo bacterial infection 0.923768 SRR942769 embryo myd88+/+ 0.898083 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.8627819999999999 SRR1291414 5 dpi normal 0.8463379999999999 SRR630463 5 dpf normal 0.843245 SRR1004787 larvae impdh1a morpholino 0.815735 SRR1035237 liver transgenic UHRF1 0.8074819999999999 SRR797911 embryo prdm1-/- 0.789937 SRR1569491 embryo normal 0.778497 SRR1004789 larvae impdh2 morpholino 0.770413 SRR776508 embryo miR-146 knockdown 0.767134 SRR801556 embryo RPS19 and p53 morpholino 0.762252 SRR776509 embryo Salmonella infected 0.759466 SRR797908 embryo normal 0.74515 SRR516128 skin male and 5 month 0.6881189999999999 SRR1562533 testis normal 0.650829 SRR1648854 brain normal 0.57429 SRR1647684 spleen SVCV treatment 0.527628 SRR891511 brain normal 0.501584 ERR023145 heart normal 0.497622 SRR1005529 embryo control morpholino 0.49048500000000006 SRR801554 embryo control morpholino 0.48974799999999996 SRR1299128 caudal fin Three days time after treatment 0.46014799999999995 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.443954 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.428071 SRR1205154 5dpf transgenic sqET20 0.40125 SRR776507 embryo normal 0.390594 SRR1562528 eye normal 0.377052 SRR1565813 brain normal 0.374064 SRR1647682 spleen normal 0.358036 ERR023143 swim bladder normal 0.336568 SRR1565819 brain normal 0.333002 ERR594418 retina transgenic flk1 and develop tumors 0.330994 SRR535847 larvae normal 0.32798099999999997 ERR023146 head kidney normal 0.321182 SRR1049814 256 cell normal 0.292381 SRR1565809 brain normal 0.283754 SRR1342217 embryo infection with Mycobacterium marinum 0.274712 SRR535978 larvae normal 0.23780900000000002 SRR372789 1K cell normal 0.234094 SRR1565815 brain normal 0.224214 SRR1565807 brain normal 0.210721 SRR1708346 embryo SIBPS 0.192669 SRR1565811 brain normal 0.177055 SRR1299127 caudal fin Two days time after treatment 0.17288299999999998 SRR1048061 pineal gland dark 0.155691 ERR594417 retina normal 0.150213 SRR1648856 brain normal 0.150071 SRR1021215 sphere stage Mzeomesa 0.142933 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.13980399999999998 SRR1565805 brain normal 0.139489 ERR594416 retina transgenic flk1 0.138309 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.13503900000000002 SRR801555 embryo RPS19 morpholino 0.124801 SRR514030 retina id2a morpholino 0.12411099999999999 SRR1565817 brain normal 0.09823849999999999 SRR372787 2-4 cell normal 0.0748387 SRR1708343 embryo MUTAS 0.0726763 SRR1648855 brain normal 0.065662 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.05932040000000001 SRR800037 egg normal 0.05486669999999999 SRR748490 1 kcell normal 0.0543765 SRR748488 sperm normal 0.040945300000000004 SRR1621206 embryo normal 0.026082 SRR535890 larvae normal 0.00845622 SRR535943 larvae vangl mut 0.00622461 SRR1708344 embryo MUTPS 0.0036638000000000005 SRR748489 egg normal 0.00314394 SRR535986 larvae nhsl1b mut 0.000624703 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.000222335 SRR592700 pineal gland normal 0.00010883799999999999 SRR800043 sphere stage normal 6.48561e-05