sample tissue condition fpkm SRR1035981 13 hpf rx3+/+ or rx3+/- 9.58137 SRR1562533 testis normal 9.00497 SRR658537 bud Gata6 morphant 8.80216 SRR1035978 13 hpf rx3-/- 8.23732 SRR658541 6 somite normal 7.583660000000001 SRR658533 bud normal 7.54856 SRR658535 bud Gata5 morphant 6.21241 SRR658545 6 somite Gata6 morphant 6.17865 SRR658539 bud Gata5/6 morphant 6.08168 SRR797911 embryo prdm1-/- 6.00972 SRR658547 6 somite Gata5/6 morphant 5.81185 SRR658543 6 somite Gata5 morphan 4.62962 SRR797908 embryo normal 4.07828 SRR749514 24 hpf normal 3.5902800000000004 SRR797914 embryo pbx2/4-MO 3.15893 SRR797917 embryo pbx2/4-MO and prdm1-/- 3.0002 SRR372796 bud normal 2.90592 SRR1035984 13 hpf normal 2.8147599999999997 SRR700537 heart Gata4 morpholino 2.57282 SRR372793 shield normal 1.6684900000000003 SRR748491 germ ring normal 1.61821 SRR1534351 larvae 500 ug/l BDE47 treatment 1.61513 SRR1104059 heart kctd10 mut 1.56895 SRR516134 skin male and 5 month 1.50666 SRR1299125 caudal fin Half day time after treatment 1.4317 SRR748488 sperm normal 1.42426 SRR700534 heart control morpholino 1.2951700000000002 SRR372798 28 hpf normal 1.2734 SRR1534349 larvae DMSO vehicle 1.2219 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.21174 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.19156 SRR535986 larvae nhsl1b mut 1.17469 SRR535926 larvae normal 1.16572 SRR535913 larvae krox mut 1.0585 ERR023143 swim bladder normal 1.05063 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.976922 SRR516126 skin male and 5 month 0.954025 SRR535943 larvae vangl mut 0.8978870000000001 SRR1569491 embryo normal 0.8921370000000001 SRR527840 24hpf normal 0.8820950000000001 SRR535978 larvae normal 0.850347 SRR516127 skin male and 5 month 0.837943 SRR519732 7 dpf FETOH treatment 0.816975 SRR610741 3 dpf express Ras 0.808017 SRR594771 endothelium normal 0.787617 SRR519752 7 dpf VD3 treatment 0.7829510000000001 SRR800046 sphere stage 5azaCyD treatment 0.7717579999999999 SRR1104058 heart normal 0.762104 SRR1299126 caudal fin One day time after treatment 0.758921 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.75451 SRR594769 blood normal 0.7519279999999999 SRR1569495 embryo normal 0.7294430000000001 SRR1534350 larvae 5 ug/l BDE47 treatment 0.714558 SRR1299127 caudal fin Two days time after treatment 0.68165 ERR023146 head kidney normal 0.662367 SRR516135 skin male and 5 month 0.660813 SRR519747 6 dpf VD3 treatment 0.648702 SRR519717 2 dpf FETOH treatment 0.643383 SRR527836 24hpf normal 0.636131 SRR610740 3 dpf normal 0.6149600000000001 SRR519737 2 dpf VD3 treatment 0.611865 SRR1004788 larvae impdh1b morpholino 0.610222 SRR1048059 pineal gland light 0.597032 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.590675 SRR776507 embryo normal 0.583481 SRR749515 24 hpf eif3ha morphant 0.5186310000000001 SRR1005530 embryo RPL11 morpholino 0.515401 SRR516133 skin male and 5 month 0.507788 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.501026 SRR776509 embryo Salmonella infected 0.50044 SRR592701 pineal gland normal 0.49931899999999996 SRR527844 24hpf normal 0.48850600000000005 SRR1004785 larvae normal 0.479508 SRR519742 4 dpf VD3 treatment 0.45291099999999995 SRR1028002 head normal 0.44552299999999995 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.42587600000000003 SRR1028004 head normal 0.4249 SRR800049 sphere stage control treatment 0.41066099999999994 SRR592699 pineal gland normal 0.403111 SRR519727 6 dpf FETOH treatment 0.39421999999999996 SRR1342218 embryo marco morpholino 0.391615 SRR527832 16-36 hpf normal 0.384924 SRR038626 embryo control morpholino and bacterial infection 0.384305 SRR535890 larvae normal 0.38390100000000005 SRR800043 sphere stage normal 0.379341 SRR941753 posterior pectoral fin normal 0.354515 SRR519722 4 dpf FETOH treatment 0.350707 SRR592700 pineal gland normal 0.344564 SRR776508 embryo miR-146 knockdown 0.33769699999999997 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.333449 SRR516131 skin male and 5 month 0.31146 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.299191 SRR1708345 embryo SIBAS 0.283421 SRR1342217 embryo infection with Mycobacterium marinum 0.277904 SRR1004786 larvae control morpholino 0.25497600000000004 SRR065197 3 dpf U1C knockout 0.248333 SRR1167753 embryo bacterial infection 0.238279 SRR1035239 liver transgenic mCherry control 0.236067 SRR1028003 head normal 0.235179 SRR891512 blood normal 0.224611 SRR1188152 embryo Insulin 0.5 hpi 0.221125 SRR1188160 embryo Insulin 4 hpi 0.21708000000000002 SRR630464 5 dpf injected epidermidis 0.21681999999999998 SRR891510 muscle normal 0.212561 SRR630463 5 dpf normal 0.207833 SRR038627 embryo control morpholino 0.207826 SRR1004787 larvae impdh1a morpholino 0.206997 SRR1048061 pineal gland dark 0.199317 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.194632 SRR592703 pineal gland normal 0.191066 SRR1035237 liver transgenic UHRF1 0.187397 SRR1167762 embryo ptpn6 morpholino 0.183763 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.183569 SRR1291414 5 dpi normal 0.17896800000000002 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.17608 SRR610742 3 dpf express NICD 0.17460599999999998 SRR516129 skin male and 5 month 0.17369400000000002 SRR1708346 embryo SIBPS 0.17243 SRR941749 anterior pectoral fin normal 0.16747 SRR1005529 embryo control morpholino 0.165273 SRR801554 embryo control morpholino 0.165024 SRR592702 pineal gland normal 0.164921 SRR592698 pineal gland normal 0.164742 SRR527835 tail normal 0.162003 SRR1708343 embryo MUTAS 0.158174 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.15598499999999998 SRR1021215 sphere stage Mzeomesa 0.154873 SRR1291417 5 dpi injected marinum 0.154118 SRR1565811 brain normal 0.150536 SRR1167756 embryo mpeg1 morpholino 0.148341 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.143538 SRR726541 5 dpf infection with Mycobacterium marinum 0.14240799999999998 SRR1205154 5dpf transgenic sqET20 0.140281 SRR1004789 larvae impdh2 morpholino 0.138767 SRR1299129 caudal fin Seven days time after treatment 0.13838699999999998 SRR1342216 embryo norml 0.13804 SRR1299124 caudal fin Zero day time after treatment 0.137074 SRR1648854 brain normal 0.137009 SRR942769 embryo myd88+/+ 0.136423 SRR1299128 caudal fin Three days time after treatment 0.133245 SRR1039573 gastrointestinal diet 0.75 NPM 0.132553 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.129224 SRR1188156 embryo Control PBS 4 hpi 0.128545 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.12745 SRR1708344 embryo MUTPS 0.12324 SRR1523214 embryo glut12 morpholino 0.119729 SRR1647684 spleen SVCV treatment 0.11855 SRR1565809 brain normal 0.117372 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.112704 SRR527833 5 dpf normal 0.103119 SRR038625 embryo traf6 morpholino 0.102213 SRR726540 5 dpf normal 0.0987822 SRR065196 3 dpf normal 0.097876 SRR1167752 embryo normal 0.09640750000000001 SRR801556 embryo RPS19 and p53 morpholino 0.09485249999999999 SRR1647683 spleen SVCV treatment 0.0929036 SRR800037 egg normal 0.09156560000000001 SRR372802 5 dpf normal 0.0911443 SRR372800 2 dpf normal 0.0888588 SRR1523211 embryo control morpholino 0.0886174 SRR372791 dome normal 0.0865595 SRR516128 skin male and 5 month 0.07653760000000001 SRR1647680 head kidney SVCV treatment 0.0749513 SRR535847 larvae normal 0.068234 SRR527834 head normal 0.06787660000000001 SRR535848 larvae hoxb1b mut 0.0669063 ERR594417 retina normal 0.06656319999999999 SRR516125 skin male and 3.5 year 0.0645012 SRR1562531 muscle normal 0.062784 SRR633550 larvae exposed to hypoxia stress 0.06216080000000001 SRR516121 skin male and 3.5 year 0.0582048 ERR594416 retina transgenic flk1 0.05279980000000001 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.0519279 SRR1188148 embryo Control PBS 0.5 hpi 0.051777300000000005 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.0500312 SRR1648855 brain normal 0.0475314 SRR957180 heart 7 days after heart tip amputation 0.0466575 SRR514028 retina control morpholino 0.043687699999999996 SRR516124 skin male and 3.5 year 0.0429991 SRR1647681 head kidney SVCV treatment 0.04194 SRR1562528 eye normal 0.041211300000000006 SRR942764 embryo myd88-/- 0.0407284 SRR831692 embryo normal 0.04049319999999999 ERR594418 retina transgenic flk1 and develop tumors 0.0402472 SRR1647679 head kidney normal 0.0373049 SRR1565813 brain normal 0.036675099999999995 ERR023145 heart normal 0.036042199999999996 SRR1648856 brain normal 0.0354205 SRR514030 retina id2a morpholino 0.0352891 SRR516123 skin male and 3.5 year 0.03440530000000001 SRR516122 skin male and 3.5 year 0.0322797 ERR023144 brain normal 0.0293887 SRR1562529 intestine and pancreas normal 0.026051799999999996 SRR1021213 sphere stage normal 0.0260496 SRR891511 brain normal 0.0254197 SRR1565817 brain normal 0.0238113 SRR633516 larvae normal 0.023149799999999998 SRR1562532 spleen normal 0.021248 SRR1647682 spleen normal 0.0187953 SRR1565815 brain normal 0.016305899999999998 SRR1039571 gastrointestinal diet 0.1 NPM 0.010968 SRR372787 2-4 cell normal 0.010022399999999999 SRR633544 larvae exposed to cold stress 0.00904314 SRR1565819 brain normal 0.00587384 SRR1621206 embryo normal 0.00229479 SRR372789 1K cell normal 0.00225894 SRR1049814 256 cell normal 0.00225234