sample tissue condition fpkm SRR1299125 caudal fin Half day time after treatment 57.9637 SRR1299126 caudal fin One day time after treatment 57.1809 SRR372796 bud normal 40.521 SRR1299127 caudal fin Two days time after treatment 39.0857 SRR1569491 embryo normal 33.0586 SRR1648856 brain normal 29.3932 SRR1299129 caudal fin Seven days time after treatment 27.7334 SRR1299128 caudal fin Three days time after treatment 25.5929 SRR535978 larvae normal 25.5208 SRR527840 24hpf normal 24.3846 SRR1299124 caudal fin Zero day time after treatment 22.3569 SRR1648854 brain normal 20.7148 SRR535986 larvae nhsl1b mut 19.9799 SRR527836 24hpf normal 19.9182 SRR514028 retina control morpholino 18.0551 SRR776507 embryo normal 17.2907 SRR372798 28 hpf normal 17.195 SRR776508 embryo miR-146 knockdown 16.8979 SRR1035237 liver transgenic UHRF1 16.6754 SRR527844 24hpf normal 16.1923 SRR372800 2 dpf normal 15.9319 SRR700537 heart Gata4 morpholino 15.5695 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 15.4195 SRR630464 5 dpf injected epidermidis 15.3366 SRR1708346 embryo SIBPS 15.0978 SRR776510 embryo Salmonella infected and miR-146 knockdown 14.3115 ERR023144 brain normal 14.1768 SRR630463 5 dpf normal 14.0691 SRR516123 skin male and 3.5 year 13.8937 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 13.4218 SRR776509 embryo Salmonella infected 13.2834 SRR516124 skin male and 3.5 year 13.0111 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 12.8262 SRR1291417 5 dpi injected marinum 12.8086 SRR1708344 embryo MUTPS 12.686 SRR1523211 embryo control morpholino 12.3753 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 12.3668 SRR516125 skin male and 3.5 year 12.1018 SRR516121 skin male and 3.5 year 12.0146 SRR1205160 5dpf transgenic sqET20 and GFP+ 11.8914 SRR1291414 5 dpi normal 11.7294 SRR1708345 embryo SIBAS 11.5434 SRR372793 shield normal 11.4941 SRR1167757 embryo mpeg1 morpholino and bacterial infection 11.4586 SRR516122 skin male and 3.5 year 11.2499 SRR1708343 embryo MUTAS 10.7964 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 10.6283 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 10.5555 SRR700534 heart control morpholino 10.5391 SRR1167763 embryo ptpn6 morpholino and bacterial infection 10.5081 SRR1648855 brain normal 10.4849 SRR1035239 liver transgenic mCherry control 10.1482 SRR658547 6 somite Gata5/6 morphant 10.1373 SRR1167753 embryo bacterial infection 10.0619 SRR1104059 heart kctd10 mut 10.0593 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 10.0385 SRR1342218 embryo marco morpholino 9.94778 SRR372802 5 dpf normal 9.8646 SRR1167762 embryo ptpn6 morpholino 9.56873 SRR516131 skin male and 5 month 9.333639999999999 SRR942769 embryo myd88+/+ 9.32991 SRR1167752 embryo normal 9.06938 SRR514030 retina id2a morpholino 8.88802 SRR516129 skin male and 5 month 8.759830000000001 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 8.741610000000001 SRR1647682 spleen normal 8.67366 SRR942764 embryo myd88-/- 8.53668 SRR797914 embryo pbx2/4-MO 8.50619 SRR1004785 larvae normal 8.456560000000001 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 8.447289999999999 SRR516127 skin male and 5 month 8.33866 SRR516126 skin male and 5 month 8.21371 SRR1004786 larvae control morpholino 8.19566 SRR516133 skin male and 5 month 8.15915 SRR1342217 embryo infection with Mycobacterium marinum 8.14657 SRR1104058 heart normal 8.07951 SRR658533 bud normal 8.04069 SRR1004787 larvae impdh1a morpholino 8.02575 SRR957181 heart normal 7.7638300000000005 SRR797917 embryo pbx2/4-MO and prdm1-/- 7.739160000000001 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.605689999999999 ERR023146 head kidney normal 7.4919 SRR1647683 spleen SVCV treatment 7.48717 SRR516134 skin male and 5 month 7.45668 SRR1005529 embryo control morpholino 7.44428 SRR801554 embryo control morpholino 7.432810000000001 SRR1565813 brain normal 7.41553 SRR1342216 embryo norml 7.3837399999999995 SRR1167756 embryo mpeg1 morpholino 7.367560000000001 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 7.206910000000001 SRR1647684 spleen SVCV treatment 7.156630000000001 SRR1562530 liver normal 7.0641300000000005 SRR1562531 muscle normal 7.02566 SRR1004788 larvae impdh1b morpholino 6.9454899999999995 SRR797911 embryo prdm1-/- 6.8906 SRR797908 embryo normal 6.616280000000001 SRR594771 endothelium normal 6.5354 SRR1565811 brain normal 6.5223 SRR1562533 testis normal 6.48093 SRR658545 6 somite Gata6 morphant 6.47604 SRR658541 6 somite normal 6.44536 SRR1565809 brain normal 6.35139 SRR1562532 spleen normal 6.32409 SRR065196 3 dpf normal 6.28771 SRR1569495 embryo normal 6.2266900000000005 SRR957180 heart 7 days after heart tip amputation 6.20408 SRR1562528 eye normal 6.0976 SRR1565805 brain normal 6.03938 SRR748488 sperm normal 6.014390000000001 SRR1565817 brain normal 5.99212 SRR1565807 brain normal 5.897480000000001 SRR516128 skin male and 5 month 5.86798 ERR023143 swim bladder normal 5.648219999999999 SRR594769 blood normal 5.6283900000000004 SRR1565819 brain normal 5.56365 ERR594417 retina normal 5.56037 SRR527833 5 dpf normal 5.4993099999999995 SRR658535 bud Gata5 morphant 5.44676 SRR1188148 embryo Control PBS 0.5 hpi 5.3711 SRR891495 heart normal 5.31606 SRR1188152 embryo Insulin 0.5 hpi 5.292269999999999 SRR658539 bud Gata5/6 morphant 5.20069 SRR749515 24 hpf eif3ha morphant 5.112 SRR1565815 brain normal 5.05387 SRR1004789 larvae impdh2 morpholino 5.0176300000000005 SRR516132 skin male and 5 month 4.96108 SRR527835 tail normal 4.903919999999999 ERR023145 heart normal 4.8263300000000005 SRR1188160 embryo Insulin 4 hpi 4.80337 SRR1562529 intestine and pancreas normal 4.65687 SRR527834 head normal 4.4831199999999995 SRR1523214 embryo glut12 morpholino 4.4177599999999995 SRR1647679 head kidney normal 4.36224 SRR1005530 embryo RPL11 morpholino 4.3556 SRR065197 3 dpf U1C knockout 4.30711 SRR658543 6 somite Gata5 morphan 4.19172 SRR801555 embryo RPS19 morpholino 4.06961 SRR1039571 gastrointestinal diet 0.1 NPM 3.90098 SRR038627 embryo control morpholino 3.8427300000000004 SRR1039573 gastrointestinal diet 0.75 NPM 3.7984199999999997 ERR594416 retina transgenic flk1 3.78776 ERR594418 retina transgenic flk1 and develop tumors 3.7409 SRR516130 skin male and 5 month 3.5886199999999997 SRR372791 dome normal 3.50103 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 3.47287 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.46867 SRR1647680 head kidney SVCV treatment 3.37877 SRR1205154 5dpf transgenic sqET20 3.37166 SRR1647681 head kidney SVCV treatment 3.26765 SRR1028002 head normal 3.18297 SRR941749 anterior pectoral fin normal 3.13236 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 2.97439 SRR535852 larvae hoxb1b mut 2.8755 SRR372789 1K cell normal 2.7972900000000003 SRR535926 larvae normal 2.77913 SRR749514 24 hpf normal 2.76252 SRR1028004 head normal 2.6964599999999996 SRR535913 larvae krox mut 2.62016 SRR1048059 pineal gland light 2.60712 SRR801556 embryo RPS19 and p53 morpholino 2.52848 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.49938 SRR527832 16-36 hpf normal 2.4026099999999997 SRR610740 3 dpf normal 2.37569 SRR516135 skin male and 5 month 2.2791900000000003 SRR038625 embryo traf6 morpholino 2.26461 SRR891510 muscle normal 2.2366099999999998 SRR592698 pineal gland normal 2.08174 SRR592699 pineal gland normal 2.02547 SRR891512 blood normal 1.9773900000000002 SRR748489 egg normal 1.9367 SRR1021213 sphere stage normal 1.9091 SRR535848 larvae hoxb1b mut 1.8465200000000002 SRR1534351 larvae 500 ug/l BDE47 treatment 1.6595900000000001 SRR038626 embryo control morpholino and bacterial infection 1.57865 SRR535850 larvae hoxb1b mut 1.46541 SRR1021215 sphere stage Mzeomesa 1.40067 SRR592703 pineal gland normal 1.39605 SRR1035984 13 hpf normal 1.33385 SRR1534350 larvae 5 ug/l BDE47 treatment 1.32918 SRR372787 2-4 cell normal 1.25242 SRR535890 larvae normal 1.24862 SRR1534349 larvae DMSO vehicle 1.24203 SRR1049814 256 cell normal 1.23032 SRR1028003 head normal 1.19526 SRR748491 germ ring normal 1.17127 SRR1621206 embryo normal 1.1172 SRR592700 pineal gland normal 1.11259 SRR658537 bud Gata6 morphant 1.10616 SRR726542 5 dpf infection with control 1.0748 SRR610741 3 dpf express Ras 0.9998459999999999 SRR1188156 embryo Control PBS 4 hpi 0.994232 SRR1035978 13 hpf rx3-/- 0.941422 SRR535943 larvae vangl mut 0.9276190000000001 SRR941753 posterior pectoral fin normal 0.88045 SRR800037 egg normal 0.878073 SRR800043 sphere stage normal 0.721535 SRR535851 larvae normal 0.703134 SRR535849 larvae normal 0.689355 SRR610742 3 dpf express NICD 0.685621 SRR891511 brain normal 0.670495 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.625818 SRR726540 5 dpf normal 0.5344220000000001 SRR535847 larvae normal 0.5276029999999999 SRR592702 pineal gland normal 0.46578100000000006 SRR519742 4 dpf VD3 treatment 0.427241 SRR519752 7 dpf VD3 treatment 0.426404 SRR633550 larvae exposed to hypoxia stress 0.385425 SRR038624 embryo traf6 morpholino and bacterial infection 0.343426 SRR519717 2 dpf FETOH treatment 0.33618200000000004 SRR519737 2 dpf VD3 treatment 0.333377 SRR748490 1 kcell normal 0.31653400000000004 SRR519732 7 dpf FETOH treatment 0.315247 SRR519727 6 dpf FETOH treatment 0.302194 SRR519747 6 dpf VD3 treatment 0.298553 SRR831692 embryo normal 0.26752600000000004 SRR519722 4 dpf FETOH treatment 0.200155 SRR633544 larvae exposed to cold stress 0.164716 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.13473 SRR726541 5 dpf infection with Mycobacterium marinum 0.00121191