sample tissue condition fpkm SRR1299127 caudal fin Two days time after treatment 27.9743 SRR1299128 caudal fin Three days time after treatment 26.8408 SRR1569491 embryo normal 17.4527 SRR658545 6 somite Gata6 morphant 16.9058 SRR1299129 caudal fin Seven days time after treatment 16.7832 SRR658533 bud normal 15.0172 SRR658541 6 somite normal 14.9601 SRR594771 endothelium normal 14.6359 SRR797914 embryo pbx2/4-MO 14.3767 SRR1569495 embryo normal 14.2719 SRR658537 bud Gata6 morphant 14.1201 SRR797917 embryo pbx2/4-MO and prdm1-/- 13.1047 SRR527840 24hpf normal 12.5931 SRR658547 6 somite Gata5/6 morphant 12.1649 SRR797911 embryo prdm1-/- 11.9692 SRR797908 embryo normal 11.7647 SRR527836 24hpf normal 11.5928 SRR1205160 5dpf transgenic sqET20 and GFP+ 10.8127 SRR749515 24 hpf eif3ha morphant 10.776 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 10.2183 SRR514030 retina id2a morpholino 9.98283 SRR776507 embryo normal 9.44478 SRR776510 embryo Salmonella infected and miR-146 knockdown 9.33486 SRR776508 embryo miR-146 knockdown 9.08802 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 8.97402 SRR1035981 13 hpf rx3+/+ or rx3+/- 8.57698 SRR1035978 13 hpf rx3-/- 8.48495 SRR658535 bud Gata5 morphant 8.386339999999999 SRR749514 24 hpf normal 8.338289999999999 SRR658539 bud Gata5/6 morphant 8.12905 SRR776509 embryo Salmonella infected 8.07928 SRR535943 larvae vangl mut 8.02167 SRR527844 24hpf normal 7.983560000000001 SRR658543 6 somite Gata5 morphan 7.72455 SRR535913 larvae krox mut 7.623289999999999 SRR535978 larvae normal 7.454560000000001 SRR535890 larvae normal 7.40537 SRR535926 larvae normal 7.2544699999999995 ERR594417 retina normal 6.89203 SRR1205154 5dpf transgenic sqET20 6.6536 SRR535986 larvae nhsl1b mut 6.65238 SRR1104058 heart normal 6.63438 SRR1004788 larvae impdh1b morpholino 6.51832 SRR1708345 embryo SIBAS 6.50166 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 6.45374 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 6.275869999999999 SRR038627 embryo control morpholino 6.136819999999999 ERR594416 retina transgenic flk1 6.09791 SRR630464 5 dpf injected epidermidis 6.07918 SRR1004786 larvae control morpholino 5.864269999999999 SRR1035984 13 hpf normal 5.7324 SRR700537 heart Gata4 morpholino 5.59614 SRR1104059 heart kctd10 mut 5.5934800000000005 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.5703 SRR592700 pineal gland normal 5.42665 SRR1708346 embryo SIBPS 5.34075 SRR630463 5 dpf normal 5.29639 SRR1708344 embryo MUTPS 5.19412 SRR1048061 pineal gland dark 5.1391800000000005 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 5.11888 SRR038625 embryo traf6 morpholino 5.02161 SRR1299124 caudal fin Zero day time after treatment 4.9593 SRR527832 16-36 hpf normal 4.8525 SRR1188148 embryo Control PBS 0.5 hpi 4.79779 SRR038624 embryo traf6 morpholino and bacterial infection 4.77819 ERR023146 head kidney normal 4.72388 SRR1291414 5 dpi normal 4.6363900000000005 SRR1004787 larvae impdh1a morpholino 4.55337 SRR1291417 5 dpi injected marinum 4.37691 SRR038626 embryo control morpholino and bacterial infection 4.3108 SRR1342218 embryo marco morpholino 4.24672 SRR514028 retina control morpholino 4.1908900000000004 SRR1167762 embryo ptpn6 morpholino 4.14341 SRR1048059 pineal gland light 4.12082 SRR1167757 embryo mpeg1 morpholino and bacterial infection 4.11488 SRR1188152 embryo Insulin 0.5 hpi 4.11258 SRR1167752 embryo normal 4.0941 ERR023144 brain normal 4.0288699999999995 SRR1523214 embryo glut12 morpholino 3.97336 SRR592702 pineal gland normal 3.90555 SRR1523211 embryo control morpholino 3.88655 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.83869 SRR1342216 embryo norml 3.80799 SRR1562528 eye normal 3.7562699999999998 SRR1004785 larvae normal 3.72929 SRR1167753 embryo bacterial infection 3.72125 SRR942769 embryo myd88+/+ 3.66877 SRR1167756 embryo mpeg1 morpholino 3.64015 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.62795 SRR1299125 caudal fin Half day time after treatment 3.6010800000000005 SRR1708343 embryo MUTAS 3.5411900000000003 SRR942764 embryo myd88-/- 3.5298199999999995 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.52535 SRR801556 embryo RPS19 and p53 morpholino 3.4349 SRR1004789 larvae impdh2 morpholino 3.3993300000000004 SRR1188160 embryo Insulin 4 hpi 3.26978 SRR700534 heart control morpholino 3.2526 SRR801555 embryo RPS19 morpholino 3.19339 SRR1299126 caudal fin One day time after treatment 3.1553299999999997 SRR831692 embryo normal 3.12121 SRR519717 2 dpf FETOH treatment 3.10829 SRR519737 2 dpf VD3 treatment 3.08858 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.03685 SRR1342217 embryo infection with Mycobacterium marinum 3.03173 SRR1188156 embryo Control PBS 4 hpi 3.0222900000000004 SRR1005529 embryo control morpholino 2.9891900000000002 SRR801554 embryo control morpholino 2.98469 SRR941749 anterior pectoral fin normal 2.91995 SRR592701 pineal gland normal 2.90955 SRR1028004 head normal 2.89902 SRR1028002 head normal 2.8887 SRR1647681 head kidney SVCV treatment 2.83283 SRR592703 pineal gland normal 2.82783 SRR1005530 embryo RPL11 morpholino 2.81383 SRR594769 blood normal 2.8058400000000003 SRR1562533 testis normal 2.76546 SRR065197 3 dpf U1C knockout 2.7176 SRR592698 pineal gland normal 2.67483 SRR726540 5 dpf normal 2.6686400000000003 ERR594418 retina transgenic flk1 and develop tumors 2.60776 SRR527833 5 dpf normal 2.59485 SRR519727 6 dpf FETOH treatment 2.4474299999999998 SRR610741 3 dpf express Ras 2.4177400000000002 SRR519747 6 dpf VD3 treatment 2.40184 SRR1534350 larvae 5 ug/l BDE47 treatment 2.39875 SRR1534349 larvae DMSO vehicle 2.31498 SRR592699 pineal gland normal 2.27285 SRR1647679 head kidney normal 2.24218 SRR519732 7 dpf FETOH treatment 2.19367 SRR519752 7 dpf VD3 treatment 2.18337 SRR1028003 head normal 2.18083 SRR065196 3 dpf normal 2.1151 SRR1534351 larvae 500 ug/l BDE47 treatment 2.09132 SRR1565811 brain normal 2.0909299999999997 SRR633550 larvae exposed to hypoxia stress 2.04732 SRR610740 3 dpf normal 2.02965 SRR1565809 brain normal 1.9978 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.9709999999999999 SRR519722 4 dpf FETOH treatment 1.9424400000000002 SRR535850 larvae hoxb1b mut 1.9334200000000001 SRR610742 3 dpf express NICD 1.92295 SRR1647680 head kidney SVCV treatment 1.9141400000000002 SRR633516 larvae normal 1.82644 SRR519742 4 dpf VD3 treatment 1.8157599999999998 SRR535847 larvae normal 1.7929700000000002 SRR516130 skin male and 5 month 1.79162 SRR726541 5 dpf infection with Mycobacterium marinum 1.76511 SRR527834 head normal 1.7289599999999998 SRR535848 larvae hoxb1b mut 1.72432 SRR535851 larvae normal 1.6688900000000002 SRR726542 5 dpf infection with control 1.65365 SRR535852 larvae hoxb1b mut 1.62612 SRR1565805 brain normal 1.5996700000000001 SRR535849 larvae normal 1.5854700000000002 SRR1565807 brain normal 1.5472299999999999 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.54541 SRR633544 larvae exposed to cold stress 1.53823 ERR023143 swim bladder normal 1.53136 SRR1565817 brain normal 1.5189700000000002 SRR1565819 brain normal 1.50108 SRR1565813 brain normal 1.46844 SRR516126 skin male and 5 month 1.4513 SRR1565815 brain normal 1.44207 ERR023145 heart normal 1.4114799999999998 SRR516127 skin male and 5 month 1.39153 SRR516128 skin male and 5 month 1.28688 SRR891511 brain normal 1.17134 SRR516134 skin male and 5 month 1.16546 SRR516135 skin male and 5 month 1.11868 SRR516132 skin male and 5 month 1.05306 SRR941753 posterior pectoral fin normal 1.05049 SRR1562532 spleen normal 1.01519 SRR516129 skin male and 5 month 0.992064 SRR516133 skin male and 5 month 0.9385379999999999 SRR516122 skin male and 3.5 year 0.886934 SRR516131 skin male and 5 month 0.740592 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.652614 SRR516125 skin male and 3.5 year 0.651442 SRR516121 skin male and 3.5 year 0.5593199999999999 SRR516123 skin male and 3.5 year 0.44312700000000005 SRR1562531 muscle normal 0.372469 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.362738 SRR1562530 liver normal 0.361012 SRR891510 muscle normal 0.307949 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.294486 SRR1035239 liver transgenic mCherry control 0.276979 SRR1035237 liver transgenic UHRF1 0.264408 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.25253600000000004 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.248838 SRR748488 sperm normal 0.234578 SRR891495 heart normal 0.219919 SRR516124 skin male and 3.5 year 0.199953 SRR1039571 gastrointestinal diet 0.1 NPM 0.155064 SRR1647683 spleen SVCV treatment 0.131905 SRR1647682 spleen normal 0.129111 SRR1039573 gastrointestinal diet 0.75 NPM 0.122202 SRR1021215 sphere stage Mzeomesa 0.11326800000000001 SRR1647684 spleen SVCV treatment 0.111812 SRR800045 muscle normal 0.110876 SRR527835 tail normal 0.094183 SRR1021213 sphere stage normal 0.0811059 SRR891504 liver normal 0.0715953 SRR800046 sphere stage 5azaCyD treatment 0.0593238 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.058798800000000005 SRR1562529 intestine and pancreas normal 0.0450195 SRR748491 germ ring normal 0.0440616 SRR891512 blood normal 0.0428185 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.0417904 SRR748489 egg normal 0.020031599999999997 SRR800043 sphere stage normal 0.010020399999999999 SRR957181 heart normal 0.00898801 SRR748490 1 kcell normal 0.0076178 SRR800037 egg normal 0.00592441 SRR1648854 brain normal 0.00507659