sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 30.5367 SRR1299125 caudal fin Half day time after treatment 24.7628 SRR516123 skin male and 3.5 year 20.7587 SRR1299126 caudal fin One day time after treatment 20.7112 SRR1299127 caudal fin Two days time after treatment 18.5452 SRR516124 skin male and 3.5 year 18.3862 SRR1299129 caudal fin Seven days time after treatment 18.275 SRR516125 skin male and 3.5 year 17.3584 SRR516121 skin male and 3.5 year 15.0071 SRR516129 skin male and 5 month 13.4204 SRR516133 skin male and 5 month 11.612 SRR1299128 caudal fin Three days time after treatment 11.5856 SRR516122 skin male and 3.5 year 10.8621 SRR516132 skin male and 5 month 10.4449 SRR1035239 liver transgenic mCherry control 9.89594 SRR516131 skin male and 5 month 8.40851 SRR516126 skin male and 5 month 7.96152 SRR527834 head normal 6.7696 ERR023143 swim bladder normal 6.47165 SRR516128 skin male and 5 month 5.62695 SRR516135 skin male and 5 month 5.36889 SRR516134 skin male and 5 month 5.31151 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 4.5008300000000006 SRR527835 tail normal 4.34249 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 4.127680000000001 SRR1035237 liver transgenic UHRF1 3.9566199999999996 SRR535986 larvae nhsl1b mut 3.9304099999999997 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.77914 SRR516127 skin male and 5 month 3.36286 SRR1291417 5 dpi injected marinum 3.32615 ERR023146 head kidney normal 3.31746 SRR1205160 5dpf transgenic sqET20 and GFP+ 3.26799 SRR630463 5 dpf normal 3.00977 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.9195 SRR630464 5 dpf injected epidermidis 2.9053299999999997 SRR535978 larvae normal 2.74871 SRR1342216 embryo norml 2.3839099999999998 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.23128 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.20593 SRR1291414 5 dpi normal 1.80365 SRR1523211 embryo control morpholino 1.7733400000000001 SRR1167762 embryo ptpn6 morpholino 1.6865599999999998 SRR1004788 larvae impdh1b morpholino 1.67305 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.61717 SRR1562530 liver normal 1.60691 SRR1004786 larvae control morpholino 1.59701 SRR1039573 gastrointestinal diet 0.75 NPM 1.55584 SRR038626 embryo control morpholino and bacterial infection 1.52158 SRR942769 embryo myd88+/+ 1.50819 SRR527836 24hpf normal 1.49609 SRR1004787 larvae impdh1a morpholino 1.49537 SRR1167752 embryo normal 1.49356 SRR1534350 larvae 5 ug/l BDE47 treatment 1.48274 SRR527840 24hpf normal 1.47819 SRR749514 24 hpf normal 1.44541 SRR1104059 heart kctd10 mut 1.43299 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.43126 SRR1167753 embryo bacterial infection 1.3266799999999999 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.29929 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.25168 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.2181600000000001 SRR1708346 embryo SIBPS 1.2060600000000001 SRR1188152 embryo Insulin 0.5 hpi 1.20068 SRR1562531 muscle normal 1.17977 SRR527833 5 dpf normal 1.15347 SRR1342218 embryo marco morpholino 1.1505 SRR700537 heart Gata4 morpholino 1.1215 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.1171200000000001 SRR535913 larvae krox mut 1.09133 SRR1004785 larvae normal 1.09019 SRR1562528 eye normal 1.09008 SRR038627 embryo control morpholino 1.07044 SRR658541 6 somite normal 1.0484799999999999 SRR942764 embryo myd88-/- 1.04512 SRR065197 3 dpf U1C knockout 1.02752 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.01689 SRR065196 3 dpf normal 1.01644 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.960759 SRR1342217 embryo infection with Mycobacterium marinum 0.956573 SRR941749 anterior pectoral fin normal 0.9143690000000001 SRR776508 embryo miR-146 knockdown 0.908328 SRR594771 endothelium normal 0.891408 SRR1562529 intestine and pancreas normal 0.8854719999999999 SRR1004789 larvae impdh2 morpholino 0.8650950000000001 SRR1188160 embryo Insulin 4 hpi 0.801718 SRR658545 6 somite Gata6 morphant 0.748378 SRR038624 embryo traf6 morpholino and bacterial infection 0.746923 SRR1523214 embryo glut12 morpholino 0.730749 SRR1708343 embryo MUTAS 0.7154550000000001 SRR1569491 embryo normal 0.701788 SRR941753 posterior pectoral fin normal 0.698661 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.672139 SRR1035984 13 hpf normal 0.66047 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.651682 ERR023145 heart normal 0.639644 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.627892 SRR658533 bud normal 0.6113529999999999 SRR1005529 embryo control morpholino 0.60006 SRR801554 embryo control morpholino 0.5999359999999999 SRR516130 skin male and 5 month 0.590762 SRR776507 embryo normal 0.5778409999999999 SRR535890 larvae normal 0.573079 SRR1035978 13 hpf rx3-/- 0.557578 SRR592700 pineal gland normal 0.533694 SRR726542 5 dpf infection with control 0.519366 SRR1562532 spleen normal 0.511798 SRR891504 liver normal 0.49922 SRR658535 bud Gata5 morphant 0.4813 ERR023144 brain normal 0.474628 SRR1048059 pineal gland light 0.454136 SRR1562533 testis normal 0.446118 SRR658547 6 somite Gata5/6 morphant 0.44267799999999996 SRR1708345 embryo SIBAS 0.441196 SRR776509 embryo Salmonella infected 0.431622 SRR1028002 head normal 0.42966800000000005 SRR1021213 sphere stage normal 0.395231 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.39009499999999997 SRR1205154 5dpf transgenic sqET20 0.37712399999999996 SRR1188156 embryo Control PBS 4 hpi 0.360249 SRR527844 24hpf normal 0.334548 SRR797911 embryo prdm1-/- 0.32745100000000005 SRR594769 blood normal 0.305148 SRR1647684 spleen SVCV treatment 0.29883200000000004 SRR592702 pineal gland normal 0.277947 SRR726540 5 dpf normal 0.272638 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.269994 SRR535926 larvae normal 0.24548899999999999 SRR658543 6 somite Gata5 morphan 0.24224899999999996 SRR658537 bud Gata6 morphant 0.241725 SRR610741 3 dpf express Ras 0.236498 SRR800046 sphere stage 5azaCyD treatment 0.231025 SRR749515 24 hpf eif3ha morphant 0.22304200000000002 SRR1188148 embryo Control PBS 0.5 hpi 0.218676 SRR514028 retina control morpholino 0.213678 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.212802 SRR1534349 larvae DMSO vehicle 0.200672 SRR1647679 head kidney normal 0.19767300000000002 SRR1167756 embryo mpeg1 morpholino 0.187995 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.180472 SRR519747 6 dpf VD3 treatment 0.180337 SRR797914 embryo pbx2/4-MO 0.178538 SRR1565815 brain normal 0.178331 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.175755 SRR1647682 spleen normal 0.172957 SRR700534 heart control morpholino 0.158709 SRR831692 embryo normal 0.15603599999999998 SRR891510 muscle normal 0.150587 SRR1565813 brain normal 0.149331 SRR1565819 brain normal 0.14310699999999998 SRR797908 embryo normal 0.13087000000000001 SRR038625 embryo traf6 morpholino 0.129338 SRR1565811 brain normal 0.126573 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.122107 SRR748491 germ ring normal 0.113979 SRR1565807 brain normal 0.105379 SRR519727 6 dpf FETOH treatment 0.096416 SRR1565817 brain normal 0.0927771 SRR800049 sphere stage control treatment 0.08997899999999999 SRR519732 7 dpf FETOH treatment 0.08010110000000001 SRR1021215 sphere stage Mzeomesa 0.079326 SRR1647681 head kidney SVCV treatment 0.0789898 SRR1708344 embryo MUTPS 0.07850639999999999 SRR519722 4 dpf FETOH treatment 0.071765 SRR519752 7 dpf VD3 treatment 0.0700428 SRR535943 larvae vangl mut 0.0695044 SRR519737 2 dpf VD3 treatment 0.0684913 ERR594416 retina transgenic flk1 0.0657383 SRR1569495 embryo normal 0.0647495 SRR658539 bud Gata5/6 morphant 0.062003499999999996 SRR592698 pineal gland normal 0.0616366 SRR519742 4 dpf VD3 treatment 0.061398 SRR891512 blood normal 0.060637800000000006 SRR1028003 head normal 0.055487800000000004 SRR514030 retina id2a morpholino 0.0546235 SRR535852 larvae hoxb1b mut 0.052610300000000006 SRR527832 16-36 hpf normal 0.048936 SRR372793 shield normal 0.042189 ERR594418 retina transgenic flk1 and develop tumors 0.0413509 SRR1028004 head normal 0.040337599999999994 SRR633516 larvae normal 0.040039599999999995 SRR1565805 brain normal 0.0373455 SRR519717 2 dpf FETOH treatment 0.03641130000000001 SRR592699 pineal gland normal 0.033492900000000006 ERR594417 retina normal 0.028105200000000004 SRR633544 larvae exposed to cold stress 0.0236836 SRR1565809 brain normal 0.0227269 SRR633550 larvae exposed to hypoxia stress 0.02215 SRR592701 pineal gland normal 0.0142908 SRR372798 28 hpf normal 0.00986535 SRR800037 egg normal 0.0079652 SRR372800 2 dpf normal 0.00684801 SRR801555 embryo RPS19 morpholino 0.00682882 SRR372796 bud normal 0.00362078 SRR1647683 spleen SVCV treatment 0.00339701 SRR372802 5 dpf normal 0.00313354 SRR1621206 embryo normal 0.00263164 SRR1039571 gastrointestinal diet 0.1 NPM 0.0009570739999999999 SRR1049814 256 cell normal 0.000950133 SRR1534351 larvae 500 ug/l BDE47 treatment 0.00045509300000000006 SRR1104058 heart normal 0.000265828 SRR535847 larvae normal 0.00026205 SRR1647680 head kidney SVCV treatment 0.00021207599999999998 SRR1005530 embryo RPL11 morpholino 0.000187993 SRR535848 larvae hoxb1b mut 0.00018698 SRR726541 5 dpf infection with Mycobacterium marinum 0.000102904 SRR610740 3 dpf normal 8.816520000000001e-05 SRR891511 brain normal 6.11825e-05 SRR800045 muscle normal 2.32798e-05 SRR748489 egg normal 2.2902e-05 SRR592703 pineal gland normal 1.4100699999999999e-05 SRR1048061 pineal gland dark 9.68096e-06 SRR800043 sphere stage normal 8.942280000000001e-06