sample tissue condition fpkm SRR514030 retina id2a morpholino 72.4781 SRR1035978 13 hpf rx3-/- 31.9721 SRR658537 bud Gata6 morphant 30.1657 SRR1035981 13 hpf rx3+/+ or rx3+/- 26.6667 SRR527833 5 dpf normal 26.5179 SRR658547 6 somite Gata5/6 morphant 25.0526 SRR1035984 13 hpf normal 24.4191 SRR514028 retina control morpholino 24.1959 SRR658533 bud normal 24.1623 SRR594771 endothelium normal 22.0805 SRR658543 6 somite Gata5 morphan 21.0137 SRR658545 6 somite Gata6 morphant 20.796999999999997 SRR527835 tail normal 20.4081 SRR658541 6 somite normal 18.7368 SRR527834 head normal 18.6205 SRR658539 bud Gata5/6 morphant 18.5023 SRR658535 bud Gata5 morphant 17.2385 SRR594769 blood normal 16.548 SRR527832 16-36 hpf normal 14.6065 ERR023145 heart normal 11.7987 ERR023143 swim bladder normal 10.5347 SRR1562530 liver normal 9.94559 SRR1569491 embryo normal 8.4449 SRR800037 egg normal 8.40413 ERR023144 brain normal 7.65745 SRR749515 24 hpf eif3ha morphant 7.4473899999999995 ERR023146 head kidney normal 7.23727 SRR038625 embryo traf6 morpholino 7.10463 SRR038624 embryo traf6 morpholino and bacterial infection 6.673030000000001 SRR527840 24hpf normal 6.51432 SRR1035239 liver transgenic mCherry control 6.1329 SRR038627 embryo control morpholino 5.8993199999999995 SRR797914 embryo pbx2/4-MO 5.50009 SRR797917 embryo pbx2/4-MO and prdm1-/- 5.07653 SRR1291417 5 dpi injected marinum 5.03166 SRR1708343 embryo MUTAS 4.99415 SRR700537 heart Gata4 morpholino 4.84347 SRR797908 embryo normal 4.7289 SRR516125 skin male and 3.5 year 4.61343 SRR1188160 embryo Insulin 4 hpi 4.58483 SRR1004786 larvae control morpholino 4.36974 SRR1205160 5dpf transgenic sqET20 and GFP+ 4.24899 SRR749514 24 hpf normal 4.1952 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 4.18525 SRR527836 24hpf normal 4.03754 SRR1299125 caudal fin Half day time after treatment 4.03644 SRR038626 embryo control morpholino and bacterial infection 4.03083 SRR1562533 testis normal 4.02504 SRR891504 liver normal 4.00785 SRR797911 embryo prdm1-/- 3.95531 SRR1039571 gastrointestinal diet 0.1 NPM 3.78045 SRR1039573 gastrointestinal diet 0.75 NPM 3.7157199999999997 SRR1569495 embryo normal 3.7010400000000003 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 3.3727300000000002 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.17747 SRR527844 24hpf normal 3.176 SRR1035237 liver transgenic UHRF1 3.09329 SRR535978 larvae normal 3.05885 SRR630464 5 dpf injected epidermidis 2.9967900000000003 SRR516134 skin male and 5 month 2.9695099999999996 SRR776510 embryo Salmonella infected and miR-146 knockdown 2.96408 SRR1342218 embryo marco morpholino 2.89958 SRR1205154 5dpf transgenic sqET20 2.8915 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2.83058 SRR1004787 larvae impdh1a morpholino 2.8088900000000003 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.76266 SRR700534 heart control morpholino 2.73599 SRR1004788 larvae impdh1b morpholino 2.69667 SRR372793 shield normal 2.69484 SRR1562532 spleen normal 2.68413 SRR1188152 embryo Insulin 0.5 hpi 2.67117 SRR1342217 embryo infection with Mycobacterium marinum 2.6344 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.634 SRR535943 larvae vangl mut 2.60018 SRR535986 larvae nhsl1b mut 2.55531 SRR801555 embryo RPS19 morpholino 2.5148900000000003 SRR1299129 caudal fin Seven days time after treatment 2.45595 SRR748488 sperm normal 2.41526 SRR372796 bud normal 2.4133400000000003 SRR726540 5 dpf normal 2.34821 SRR942764 embryo myd88-/- 2.31766 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.31701 SRR1188156 embryo Control PBS 4 hpi 2.31507 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.27528 SRR1523211 embryo control morpholino 2.24906 SRR1299126 caudal fin One day time after treatment 2.24532 SRR630463 5 dpf normal 2.23984 SRR1188148 embryo Control PBS 0.5 hpi 2.17196 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.16645 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.13448 SRR516124 skin male and 3.5 year 2.1262 SRR516131 skin male and 5 month 2.04605 SRR610742 3 dpf express NICD 1.9999799999999999 SRR941749 anterior pectoral fin normal 1.99472 SRR535926 larvae normal 1.97501 SRR1167753 embryo bacterial infection 1.9287400000000001 SRR1648856 brain normal 1.90851 SRR776507 embryo normal 1.89715 SRR942769 embryo myd88+/+ 1.8787599999999998 SRR516122 skin male and 3.5 year 1.8607099999999999 SRR1562529 intestine and pancreas normal 1.85505 SRR516123 skin male and 3.5 year 1.84548 SRR1167752 embryo normal 1.8276 SRR941753 posterior pectoral fin normal 1.82267 SRR610741 3 dpf express Ras 1.8168 SRR1534351 larvae 500 ug/l BDE47 treatment 1.7991 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.77089 SRR535890 larvae normal 1.7628599999999999 SRR1291414 5 dpi normal 1.75178 SRR1708345 embryo SIBAS 1.74275 SRR1647680 head kidney SVCV treatment 1.71002 SRR776509 embryo Salmonella infected 1.7024400000000002 SRR1565817 brain normal 1.6764599999999998 SRR516127 skin male and 5 month 1.66208 SRR1565805 brain normal 1.63215 SRR1299128 caudal fin Three days time after treatment 1.62926 SRR1565809 brain normal 1.62296 SRR1005529 embryo control morpholino 1.59935 SRR801554 embryo control morpholino 1.5962399999999999 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.58964 SRR1565807 brain normal 1.5616299999999999 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.54715 SRR1167762 embryo ptpn6 morpholino 1.5414 SRR1647681 head kidney SVCV treatment 1.53557 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.50906 SRR726542 5 dpf infection with control 1.48735 SRR1565811 brain normal 1.48415 SRR516130 skin male and 5 month 1.47749 SRR372798 28 hpf normal 1.47709 SRR372802 5 dpf normal 1.45649 SRR535850 larvae hoxb1b mut 1.43671 SRR748491 germ ring normal 1.43489 SRR831692 embryo normal 1.39046 SRR1299124 caudal fin Zero day time after treatment 1.36558 SRR1342216 embryo norml 1.35618 SRR1021215 sphere stage Mzeomesa 1.35074 SRR1562531 muscle normal 1.31105 SRR516126 skin male and 5 month 1.30846 SRR1708346 embryo SIBPS 1.29298 SRR1104058 heart normal 1.29033 SRR1565813 brain normal 1.28891 SRR1104059 heart kctd10 mut 1.25921 SRR1004789 larvae impdh2 morpholino 1.25389 SRR535848 larvae hoxb1b mut 1.24223 SRR1028002 head normal 1.2352 SRR535913 larvae krox mut 1.23417 SRR891495 heart normal 1.2267 SRR1647679 head kidney normal 1.22285 SRR1565815 brain normal 1.21997 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.20367 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.20266 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.18805 SRR372800 2 dpf normal 1.12194 SRR1523214 embryo glut12 morpholino 1.1078 SRR1299127 caudal fin Two days time after treatment 1.10707 SRR801556 embryo RPS19 and p53 morpholino 1.10408 SRR1562528 eye normal 1.0557299999999998 SRR1648854 brain normal 1.0163799999999998 SRR065196 3 dpf normal 1.0146700000000002 SRR1708344 embryo MUTPS 0.992792 ERR594417 retina normal 0.991994 SRR1167756 embryo mpeg1 morpholino 0.960362 SRR535852 larvae hoxb1b mut 0.9582799999999999 SRR1004785 larvae normal 0.925869 SRR610740 3 dpf normal 0.9100719999999999 SRR065197 3 dpf U1C knockout 0.908487 SRR592701 pineal gland normal 0.8619829999999999 SRR633544 larvae exposed to cold stress 0.838672 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.810474 SRR1028003 head normal 0.772593 SRR535849 larvae normal 0.770964 SRR1647684 spleen SVCV treatment 0.7701060000000001 SRR1647683 spleen SVCV treatment 0.768461 SRR800043 sphere stage normal 0.764994 SRR1028004 head normal 0.761872 SRR1534349 larvae DMSO vehicle 0.74052 ERR594418 retina transgenic flk1 and develop tumors 0.7007909999999999 SRR633550 larvae exposed to hypoxia stress 0.682127 SRR535847 larvae normal 0.6349199999999999 SRR1565819 brain normal 0.62556 SRR519747 6 dpf VD3 treatment 0.6222880000000001 SRR891512 blood normal 0.606643 SRR1647682 spleen normal 0.605607 SRR535851 larvae normal 0.5778479999999999 SRR633516 larvae normal 0.575554 ERR594416 retina transgenic flk1 0.573036 SRR519742 4 dpf VD3 treatment 0.5619770000000001 SRR516121 skin male and 3.5 year 0.561797 SRR516128 skin male and 5 month 0.554547 SRR891511 brain normal 0.5243680000000001 SRR891510 muscle normal 0.507583 SRR516129 skin male and 5 month 0.502409 SRR372791 dome normal 0.497508 SRR1534350 larvae 5 ug/l BDE47 treatment 0.48371499999999995 SRR516135 skin male and 5 month 0.481764 SRR519717 2 dpf FETOH treatment 0.46677299999999994 SRR519737 2 dpf VD3 treatment 0.45511 SRR519722 4 dpf FETOH treatment 0.43932299999999996 SRR1021213 sphere stage normal 0.424666 SRR519727 6 dpf FETOH treatment 0.407294 SRR519732 7 dpf FETOH treatment 0.381252 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.368117 SRR592698 pineal gland normal 0.346462 SRR592699 pineal gland normal 0.338499 SRR957181 heart normal 0.32943 SRR516133 skin male and 5 month 0.329201 SRR592702 pineal gland normal 0.324218 SRR519752 7 dpf VD3 treatment 0.32292 SRR372787 2-4 cell normal 0.306758 SRR1049814 256 cell normal 0.265617 SRR1648855 brain normal 0.22091 SRR1048061 pineal gland dark 0.203739 SRR748490 1 kcell normal 0.166865 SRR957180 heart 7 days after heart tip amputation 0.146128 SRR372789 1K cell normal 0.0933904 SRR592700 pineal gland normal 0.086191 SRR776508 embryo miR-146 knockdown 0.0585118 SRR1621206 embryo normal 0.0580039 SRR726541 5 dpf infection with Mycobacterium marinum 0.00322134 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.2295899999999999e-05