sample tissue condition fpkm SRR1035239 liver transgenic mCherry control 154.125 SRR1562530 liver normal 137.914 SRR1039571 gastrointestinal diet 0.1 NPM 127.744 SRR1562529 intestine and pancreas normal 73.60600000000001 SRR1039573 gastrointestinal diet 0.75 NPM 73.4683 SRR1035237 liver transgenic UHRF1 72.3742 ERR023146 head kidney normal 58.3556 SRR592702 pineal gland normal 45.0987 SRR1299129 caudal fin Seven days time after treatment 41.36 SRR592701 pineal gland normal 39.3478 SRR535978 larvae normal 37.5909 SRR1028002 head normal 35.9 SRR1299128 caudal fin Three days time after treatment 34.368 SRR535986 larvae nhsl1b mut 30.6174 SRR592700 pineal gland normal 29.4573 SRR519732 7 dpf FETOH treatment 29.0084 SRR942769 embryo myd88+/+ 28.9483 SRR1708346 embryo SIBPS 28.7126 SRR1342216 embryo norml 27.2199 SRR592699 pineal gland normal 27.0206 SRR942764 embryo myd88-/- 26.7087 SRR1299124 caudal fin Zero day time after treatment 26.601 SRR592703 pineal gland normal 26.5981 SRR592698 pineal gland normal 26.4791 ERR023144 brain normal 26.0828 SRR1167752 embryo normal 25.9096 SRR1708344 embryo MUTPS 25.5245 SRR1048061 pineal gland dark 25.4065 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 25.2901 SRR1708345 embryo SIBAS 24.6703 SRR1028004 head normal 24.655 SRR1167753 embryo bacterial infection 24.1255 ERR023143 swim bladder normal 23.6724 SRR519727 6 dpf FETOH treatment 23.5358 SRR519752 7 dpf VD3 treatment 23.3551 SRR1342217 embryo infection with Mycobacterium marinum 23.3401 SRR630464 5 dpf injected epidermidis 22.5174 SRR1299127 caudal fin Two days time after treatment 22.3951 SRR1028003 head normal 21.7484 SRR1167756 embryo mpeg1 morpholino 21.593000000000004 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 21.5726 SRR630463 5 dpf normal 21.1329 SRR1342218 embryo marco morpholino 20.9692 SRR1562532 spleen normal 20.6005 SRR1569491 embryo normal 20.3377 SRR527836 24hpf normal 19.6292 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 19.4832 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 19.1236 SRR519747 6 dpf VD3 treatment 19.015 SRR1534350 larvae 5 ug/l BDE47 treatment 18.9457 SRR519722 4 dpf FETOH treatment 17.7131 SRR1565813 brain normal 17.7084 SRR1167757 embryo mpeg1 morpholino and bacterial infection 17.3733 SRR1565805 brain normal 17.277 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 16.8805 SRR776507 embryo normal 16.7442 SRR516129 skin male and 5 month 16.5385 SRR776508 embryo miR-146 knockdown 16.5367 SRR1167762 embryo ptpn6 morpholino 16.4168 SRR519742 4 dpf VD3 treatment 16.3204 SRR514030 retina id2a morpholino 16.1973 SRR1565809 brain normal 16.174 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 16.1655 SRR1291414 5 dpi normal 15.9011 SRR1565807 brain normal 15.7552 SRR527833 5 dpf normal 15.7172 SRR535847 larvae normal 15.5473 SRR1048059 pineal gland light 15.3448 SRR1565815 brain normal 15.3192 SRR1565811 brain normal 14.9642 SRR776510 embryo Salmonella infected and miR-146 knockdown 14.8297 SRR941749 anterior pectoral fin normal 14.7397 SRR594771 endothelium normal 14.7101 SRR594769 blood normal 14.644 SRR519717 2 dpf FETOH treatment 14.6054 SRR610741 3 dpf express Ras 14.4415 SRR514028 retina control morpholino 14.2915 SRR519737 2 dpf VD3 treatment 14.2899 SRR1565819 brain normal 14.2576 SRR1534351 larvae 500 ug/l BDE47 treatment 14.2116 SRR1708343 embryo MUTAS 14.1918 SRR1565817 brain normal 14.1541 SRR749515 24 hpf eif3ha morphant 14.0533 SRR1291417 5 dpi injected marinum 14.0088 SRR535849 larvae normal 13.9711 SRR1167763 embryo ptpn6 morpholino and bacterial infection 13.7996 SRR527840 24hpf normal 13.3527 SRR535851 larvae normal 13.2387 SRR1205160 5dpf transgenic sqET20 and GFP+ 12.8658 SRR1534349 larvae DMSO vehicle 12.8374 SRR527844 24hpf normal 12.833 SRR801556 embryo RPS19 and p53 morpholino 12.804 SRR776509 embryo Salmonella infected 12.4755 SRR535852 larvae hoxb1b mut 12.3358 SRR1104059 heart kctd10 mut 12.1121 SRR633516 larvae normal 12.0526 SRR535848 larvae hoxb1b mut 12.0125 SRR633550 larvae exposed to hypoxia stress 11.8871 SRR516126 skin male and 5 month 11.7592 SRR801555 embryo RPS19 morpholino 11.732999999999999 SRR535850 larvae hoxb1b mut 11.6212 SRR610740 3 dpf normal 11.4792 SRR610742 3 dpf express NICD 11.4187 SRR1569495 embryo normal 11.2131 SRR1299126 caudal fin One day time after treatment 11.0753 SRR1005530 embryo RPL11 morpholino 11.0266 SRR516133 skin male and 5 month 10.9552 SRR516131 skin male and 5 month 10.9394 SRR1104058 heart normal 10.8743 SRR065197 3 dpf U1C knockout 10.7923 SRR726540 5 dpf normal 10.7215 SRR1004786 larvae control morpholino 10.6766 SRR1523211 embryo control morpholino 10.5311 SRR1005529 embryo control morpholino 10.3977 SRR801554 embryo control morpholino 10.3821 SRR527834 head normal 10.0961 SRR1299125 caudal fin Half day time after treatment 9.83344 SRR633544 larvae exposed to cold stress 9.6922 SRR886457 512 cell 4-thio-UTP metabolic labeling 9.39279 SRR535943 larvae vangl mut 9.19425 SRR831692 embryo normal 8.95849 SRR516127 skin male and 5 month 8.92463 SRR038624 embryo traf6 morpholino and bacterial infection 8.80821 SRR516128 skin male and 5 month 8.793510000000001 SRR749514 24 hpf normal 8.51404 SRR1188160 embryo Insulin 4 hpi 8.19891 SRR891504 liver normal 8.08052 SRR726542 5 dpf infection with control 8.04224 SRR700534 heart control morpholino 8.0309 SRR535926 larvae normal 8.02178 SRR700537 heart Gata4 morpholino 7.80744 SRR516134 skin male and 5 month 7.73279 SRR941753 posterior pectoral fin normal 7.64927 SRR1188152 embryo Insulin 0.5 hpi 7.376510000000001 SRR038627 embryo control morpholino 7.34125 SRR1035981 13 hpf rx3+/+ or rx3+/- 7.30059 SRR1004788 larvae impdh1b morpholino 7.27937 SRR1035978 13 hpf rx3-/- 6.72008 SRR065196 3 dpf normal 6.671410000000001 SRR516135 skin male and 5 month 6.655869999999999 SRR516125 skin male and 3.5 year 6.624389999999999 SRR886456 256 cell 4-thio-UTP metabolic labeling 6.53903 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 6.46571 SRR1188148 embryo Control PBS 0.5 hpi 6.31606 SRR516132 skin male and 5 month 6.2278400000000005 SRR1523214 embryo glut12 morpholino 6.18443 SRR038626 embryo control morpholino and bacterial infection 6.09889 SRR1021213 sphere stage normal 6.075480000000001 SRR886455 128 cell 4-thio-UTP metabolic labeling 6.00486 SRR1004785 larvae normal 5.65022 ERR023145 heart normal 5.5454099999999995 SRR1188156 embryo Control PBS 4 hpi 5.48505 SRR527835 tail normal 5.39866 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.1364 SRR038625 embryo traf6 morpholino 5.0147 SRR535890 larvae normal 4.840330000000001 SRR535913 larvae krox mut 4.81005 SRR726541 5 dpf infection with Mycobacterium marinum 4.74484 SRR516124 skin male and 3.5 year 4.70525 SRR516130 skin male and 5 month 4.41345 SRR516122 skin male and 3.5 year 4.30727 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 4.29549 SRR1562528 eye normal 4.2701400000000005 ERR594417 retina normal 3.9935 ERR594418 retina transgenic flk1 and develop tumors 3.98401 SRR1004787 larvae impdh1a morpholino 3.89304 SRR797914 embryo pbx2/4-MO 3.84734 SRR1205154 5dpf transgenic sqET20 3.7284 SRR527832 16-36 hpf normal 3.6011599999999997 SRR516121 skin male and 3.5 year 3.58775 SRR891511 brain normal 3.5546699999999998 SRR797911 embryo prdm1-/- 3.5438 SRR1021215 sphere stage Mzeomesa 3.47286 SRR658539 bud Gata5/6 morphant 3.42625 ERR594416 retina transgenic flk1 3.4249099999999997 SRR797917 embryo pbx2/4-MO and prdm1-/- 3.37293 SRR658533 bud normal 3.3655699999999995 SRR516123 skin male and 3.5 year 3.2738400000000003 SRR1647682 spleen normal 3.1247700000000003 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 2.81866 SRR1004789 larvae impdh2 morpholino 2.21045 SRR1647683 spleen SVCV treatment 2.0162400000000003 SRR1562533 testis normal 1.96091 SRR658547 6 somite Gata5/6 morphant 1.9351099999999999 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.9244299999999999 SRR891512 blood normal 1.76483 SRR658545 6 somite Gata6 morphant 1.7554599999999998 SRR1647681 head kidney SVCV treatment 1.7430700000000001 SRR658537 bud Gata6 morphant 1.62995 SRR658535 bud Gata5 morphant 1.60665 SRR797908 embryo normal 1.57501 SRR658541 6 somite normal 1.56178 SRR1562531 muscle normal 1.56071 SRR1647684 spleen SVCV treatment 1.43721 SRR800046 sphere stage 5azaCyD treatment 1.3602 SRR748491 germ ring normal 1.3511 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.18882 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.03453 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.00738 SRR748488 sperm normal 0.9973709999999999 SRR658543 6 somite Gata5 morphan 0.956774 SRR748490 1 kcell normal 0.9431809999999999 SRR1035984 13 hpf normal 0.882367 SRR1647679 head kidney normal 0.8160229999999999 SRR1647680 head kidney SVCV treatment 0.638195 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.624213 SRR800043 sphere stage normal 0.579112 SRR748489 egg normal 0.545466 SRR891495 heart normal 0.527767 SRR800037 egg normal 0.49460600000000005 SRR800049 sphere stage control treatment 0.35817899999999997 SRR891510 muscle normal 0.284596 SRR800045 muscle normal 0.21185 SRR1648856 brain normal 0.01819