sample tissue condition fpkm SRR594769 blood normal 133.757 SRR658545 6 somite Gata6 morphant 127.868 SRR658541 6 somite normal 126.042 SRR658543 6 somite Gata5 morphan 103.459 SRR658533 bud normal 95.4616 SRR891511 brain normal 91.885 SRR594771 endothelium normal 90.5806 SRR658547 6 somite Gata5/6 morphant 79.8494 SRR1035978 13 hpf rx3-/- 79.1694 SRR658539 bud Gata5/6 morphant 77.7121 SRR658537 bud Gata6 morphant 75.5764 SRR519732 7 dpf FETOH treatment 68.5736 SRR891504 liver normal 64.6809 SRR658535 bud Gata5 morphant 63.0713 SRR1035981 13 hpf rx3+/+ or rx3+/- 58.4509 SRR038627 embryo control morpholino 42.6397 SRR519742 4 dpf VD3 treatment 42.0444 SRR519737 2 dpf VD3 treatment 37.9286 SRR886457 512 cell 4-thio-UTP metabolic labeling 35.997 SRR038624 embryo traf6 morpholino and bacterial infection 35.8699 SRR519722 4 dpf FETOH treatment 34.442 SRR1299125 caudal fin Half day time after treatment 33.8941 SRR038625 embryo traf6 morpholino 33.3627 SRR891512 blood normal 31.3854 SRR038626 embryo control morpholino and bacterial infection 31.125999999999998 SRR726542 5 dpf infection with control 30.4702 SRR891510 muscle normal 30.2504 SRR1299126 caudal fin One day time after treatment 28.8344 SRR891495 heart normal 28.0101 SRR1039571 gastrointestinal diet 0.1 NPM 26.5908 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 24.6199 SRR1039573 gastrointestinal diet 0.75 NPM 23.1451 SRR516135 skin male and 5 month 22.9614 SRR527835 tail normal 22.8607 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 22.6831 SRR886456 256 cell 4-thio-UTP metabolic labeling 22.6754 SRR516133 skin male and 5 month 21.7772 SRR1299127 caudal fin Two days time after treatment 21.62 SRR1035984 13 hpf normal 21.4035 SRR516130 skin male and 5 month 21.3417 SRR592699 pineal gland normal 20.5852 SRR749514 24 hpf normal 20.5314 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 20.1737 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 19.9038 SRR726541 5 dpf infection with Mycobacterium marinum 19.7453 SRR1004787 larvae impdh1a morpholino 19.4415 SRR1004786 larvae control morpholino 19.226 SRR516126 skin male and 5 month 19.0046 SRR886455 128 cell 4-thio-UTP metabolic labeling 18.3263 SRR516132 skin male and 5 month 18.0692 SRR1005530 embryo RPL11 morpholino 17.8552 SRR1291417 5 dpi injected marinum 17.7203 SRR516127 skin male and 5 month 17.5322 SRR749515 24 hpf eif3ha morphant 17.5099 SRR797911 embryo prdm1-/- 17.1559 SRR797908 embryo normal 17.0554 SRR516131 skin male and 5 month 16.2512 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 16.1436 SRR1647680 head kidney SVCV treatment 15.8272 SRR797914 embryo pbx2/4-MO 15.671 SRR1004789 larvae impdh2 morpholino 15.109000000000002 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 15.0661 SRR1299129 caudal fin Seven days time after treatment 14.9837 SRR1104059 heart kctd10 mut 14.8813 SRR527840 24hpf normal 14.4592 SRR776510 embryo Salmonella infected and miR-146 knockdown 14.3182 SRR1004785 larvae normal 14.3062 ERR023146 head kidney normal 14.2177 SRR700534 heart control morpholino 14.1318 SRR1167762 embryo ptpn6 morpholino 14.1013 SRR1004788 larvae impdh1b morpholino 14.0803 ERR023143 swim bladder normal 14.0633 SRR527832 16-36 hpf normal 13.9375 SRR592702 pineal gland normal 13.6045 SRR1647683 spleen SVCV treatment 13.5504 SRR372796 bud normal 13.4589 SRR797917 embryo pbx2/4-MO and prdm1-/- 13.3708 SRR065197 3 dpf U1C knockout 12.9606 SRR1648856 brain normal 12.8394 SRR527834 head normal 12.8334 SRR1299128 caudal fin Three days time after treatment 12.8276 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 12.7734 SRR1104058 heart normal 12.7378 SRR1647681 head kidney SVCV treatment 12.619000000000002 SRR592698 pineal gland normal 12.6134 SRR516134 skin male and 5 month 12.4987 SRR065196 3 dpf normal 12.4756 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 12.4687 SRR726540 5 dpf normal 12.4675 SRR1188160 embryo Insulin 4 hpi 12.3625 SRR776509 embryo Salmonella infected 12.2603 SRR633550 larvae exposed to hypoxia stress 12.1139 SRR1205160 5dpf transgenic sqET20 and GFP+ 12.0849 SRR942764 embryo myd88-/- 12.0311 SRR1028002 head normal 12.0218 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 12.0087 SRR516123 skin male and 3.5 year 11.9756 SRR1028004 head normal 11.9729 SRR1291414 5 dpi normal 11.9721 SRR1647679 head kidney normal 11.8679 SRR1035237 liver transgenic UHRF1 11.8609 SRR776508 embryo miR-146 knockdown 11.7722 SRR514030 retina id2a morpholino 11.5322 SRR1005529 embryo control morpholino 11.4588 SRR801554 embryo control morpholino 11.4415 SRR527833 5 dpf normal 11.3962 SRR1647682 spleen normal 10.9959 SRR633516 larvae normal 10.8673 SRR527844 24hpf normal 10.8573 SRR592703 pineal gland normal 10.7819 SRR1647684 spleen SVCV treatment 10.692 SRR592700 pineal gland normal 10.57 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 10.5041 SRR941749 anterior pectoral fin normal 10.2834 SRR1569491 embryo normal 10.2344 SRR516121 skin male and 3.5 year 10.0471 SRR633544 larvae exposed to cold stress 10.0212 SRR801555 embryo RPS19 morpholino 9.81663 SRR941753 posterior pectoral fin normal 9.61904 SRR527836 24hpf normal 9.58718 SRR1167763 embryo ptpn6 morpholino and bacterial infection 9.46241 SRR516129 skin male and 5 month 9.309289999999999 SRR1167752 embryo normal 9.28577 SRR942769 embryo myd88+/+ 9.15283 SRR1299124 caudal fin Zero day time after treatment 9.13517 SRR1569495 embryo normal 9.018289999999999 SRR1188152 embryo Insulin 0.5 hpi 8.94939 SRR535926 larvae normal 8.82398 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 8.70376 SRR1188148 embryo Control PBS 0.5 hpi 8.3931 SRR610742 3 dpf express NICD 8.38599 SRR535943 larvae vangl mut 8.37856 SRR516124 skin male and 3.5 year 8.37427 SRR610741 3 dpf express Ras 8.35294 SRR801556 embryo RPS19 and p53 morpholino 8.34178 ERR023145 heart normal 8.30155 SRR1167753 embryo bacterial infection 8.26464 SRR516128 skin male and 5 month 8.18698 SRR592701 pineal gland normal 8.16841 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 8.1173 SRR1035239 liver transgenic mCherry control 8.00258 SRR700537 heart Gata4 morpholino 7.999110000000001 SRR776507 embryo normal 7.89795 SRR1028003 head normal 7.895810000000001 SRR535913 larvae krox mut 7.76473 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 7.619960000000001 SRR630464 5 dpf injected epidermidis 7.53786 SRR1205154 5dpf transgenic sqET20 7.497999999999999 SRR1523214 embryo glut12 morpholino 7.4725 SRR610740 3 dpf normal 7.18898 SRR1188156 embryo Control PBS 4 hpi 7.177460000000001 SRR1708345 embryo SIBAS 7.007439999999999 SRR516125 skin male and 3.5 year 6.9625699999999995 SRR1708343 embryo MUTAS 6.938210000000001 SRR1167757 embryo mpeg1 morpholino and bacterial infection 6.93543 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 6.607660000000001 SRR535852 larvae hoxb1b mut 6.59197 SRR1648855 brain normal 6.5500300000000005 SRR1523211 embryo control morpholino 6.47163 SRR630463 5 dpf normal 6.28641 SRR1167756 embryo mpeg1 morpholino 6.28443 ERR023144 brain normal 5.89185 SRR1648854 brain normal 5.7080400000000004 SRR1708344 embryo MUTPS 5.70179 ERR594418 retina transgenic flk1 and develop tumors 5.6151800000000005 SRR535890 larvae normal 5.5822199999999995 SRR535848 larvae hoxb1b mut 5.52893 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 5.44166 SRR1565815 brain normal 5.32815 SRR372787 2-4 cell normal 5.31706 SRR516122 skin male and 3.5 year 5.27111 SRR372793 shield normal 5.2478 SRR1708346 embryo SIBPS 5.16915 SRR748488 sperm normal 5.12287 SRR535849 larvae normal 4.9859 SRR1342216 embryo norml 4.86674 SRR372798 28 hpf normal 4.81615 SRR372789 1K cell normal 4.72914 SRR372791 dome normal 4.71537 SRR1565811 brain normal 4.4105099999999995 SRR1021215 sphere stage Mzeomesa 4.40329 SRR372802 5 dpf normal 4.31193 SRR1565819 brain normal 4.29057 SRR1562533 testis normal 4.27008 SRR1562528 eye normal 4.23572 ERR594417 retina normal 4.22774 SRR1342218 embryo marco morpholino 4.22722 ERR594416 retina transgenic flk1 4.13742 SRR1342217 embryo infection with Mycobacterium marinum 4.02395 SRR1565813 brain normal 3.97745 SRR372800 2 dpf normal 3.97465 SRR535850 larvae hoxb1b mut 3.95097 SRR1565805 brain normal 3.93488 SRR1562531 muscle normal 3.92089 SRR1048061 pineal gland dark 3.83996 SRR535851 larvae normal 3.8239199999999998 SRR1534350 larvae 5 ug/l BDE47 treatment 3.74517 SRR535847 larvae normal 3.6975 SRR1565809 brain normal 3.6389699999999996 SRR1565817 brain normal 3.5170199999999996 SRR1534349 larvae DMSO vehicle 3.4954400000000003 SRR1565807 brain normal 3.45151 SRR1534351 larvae 500 ug/l BDE47 treatment 3.44025 SRR800043 sphere stage normal 3.38249 SRR831692 embryo normal 3.36352 SRR514028 retina control morpholino 2.9579299999999997 SRR800046 sphere stage 5azaCyD treatment 2.67213 SRR1621206 embryo normal 2.66385 SRR800045 muscle normal 2.49704 SRR1562532 spleen normal 2.32804 SRR1562529 intestine and pancreas normal 2.21638 SRR1562530 liver normal 2.16636 SRR1049814 256 cell normal 1.87225 SRR1021213 sphere stage normal 1.87011 SRR535986 larvae nhsl1b mut 1.7561200000000001 SRR748489 egg normal 1.6404400000000001 SRR1048059 pineal gland light 1.63544 SRR535978 larvae normal 1.53846 SRR748490 1 kcell normal 1.45469 SRR800037 egg normal 1.28778 SRR957181 heart normal 1.1217 SRR957180 heart 7 days after heart tip amputation 1.1042100000000001 SRR748491 germ ring normal 0.5035390000000001 SRR800049 sphere stage control treatment 0.351815