sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 121.541 SRR748489 egg normal 118.415 SRR886455 128 cell 4-thio-UTP metabolic labeling 100.851 SRR1299125 caudal fin Half day time after treatment 94.3832 SRR1299129 caudal fin Seven days time after treatment 80.9733 SRR658537 bud Gata6 morphant 74.2036 SRR886456 256 cell 4-thio-UTP metabolic labeling 74.0971 SRR658539 bud Gata5/6 morphant 71.3086 SRR886457 512 cell 4-thio-UTP metabolic labeling 71.2665 SRR658535 bud Gata5 morphant 66.1557 SRR658533 bud normal 66.0485 SRR1299126 caudal fin One day time after treatment 58.4077 SRR658547 6 somite Gata5/6 morphant 58.0302 SRR1299127 caudal fin Two days time after treatment 49.2956 SRR658543 6 somite Gata5 morphan 49.1171 SRR658541 6 somite normal 48.7331 SRR658545 6 somite Gata6 morphant 46.3271 SRR527840 24hpf normal 45.6783 SRR527836 24hpf normal 40.6666 SRR1035978 13 hpf rx3-/- 36.3014 SRR1035981 13 hpf rx3+/+ or rx3+/- 35.6688 SRR797914 embryo pbx2/4-MO 33.645 SRR941749 anterior pectoral fin normal 32.7794 SRR1035984 13 hpf normal 30.595 SRR1299128 caudal fin Three days time after treatment 29.2338 SRR797917 embryo pbx2/4-MO and prdm1-/- 28.8495 SRR749515 24 hpf eif3ha morphant 27.5317 SRR797911 embryo prdm1-/- 27.3191 SRR797908 embryo normal 27.2853 SRR941753 posterior pectoral fin normal 26.0152 SRR749514 24 hpf normal 24.2053 SRR1708344 embryo MUTPS 23.0433 SRR1708346 embryo SIBPS 22.8165 SRR1021215 sphere stage Mzeomesa 20.9655 SRR1565819 brain normal 19.8186 SRR748491 germ ring normal 19.0891 SRR527844 24hpf normal 18.6795 SRR1565805 brain normal 18.6064 SRR527834 head normal 18.1358 SRR1565807 brain normal 17.927 SRR516130 skin male and 5 month 17.8963 SRR516125 skin male and 3.5 year 17.7719 SRR1565811 brain normal 17.517 SRR535926 larvae normal 17.4543 SRR1021213 sphere stage normal 17.3997 SRR1565813 brain normal 17.2086 SRR592699 pineal gland normal 16.8878 SRR516131 skin male and 5 month 16.6454 ERR023144 brain normal 16.5638 SRR1565809 brain normal 16.3511 SRR1565817 brain normal 15.9365 SRR516133 skin male and 5 month 15.93 SRR535978 larvae normal 15.2838 ERR023143 swim bladder normal 14.8041 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 14.4064 SRR516132 skin male and 5 month 13.7347 SRR1004789 larvae impdh2 morpholino 13.6323 SRR535890 larvae normal 13.4997 SRR535943 larvae vangl mut 13.2334 SRR1565815 brain normal 13.1638 SRR1004787 larvae impdh1a morpholino 13.0546 SRR592700 pineal gland normal 12.9625 SRR592698 pineal gland normal 12.7709 SRR535913 larvae krox mut 12.4428 SRR535986 larvae nhsl1b mut 12.2941 SRR800037 egg normal 11.7903 SRR516129 skin male and 5 month 11.623 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 11.4358 SRR1004786 larvae control morpholino 11.3951 SRR527835 tail normal 11.2633 SRR527832 16-36 hpf normal 11.1777 SRR1104058 heart normal 11.1768 SRR748490 1 kcell normal 11.139000000000001 SRR038627 embryo control morpholino 11.1182 SRR592703 pineal gland normal 11.075 SRR1104059 heart kctd10 mut 10.937999999999999 SRR038626 embryo control morpholino and bacterial infection 10.6634 SRR1004785 larvae normal 10.52 SRR592701 pineal gland normal 10.3272 SRR1048061 pineal gland dark 10.1251 SRR592702 pineal gland normal 10.1107 SRR1004788 larvae impdh1b morpholino 10.0464 SRR1048059 pineal gland light 9.80711 SRR038625 embryo traf6 morpholino 9.584719999999999 SRR1708345 embryo SIBAS 9.40429 SRR038624 embryo traf6 morpholino and bacterial infection 9.34629 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 9.2163 SRR776509 embryo Salmonella infected 9.13534 SRR776507 embryo normal 8.92983 SRR776508 embryo miR-146 knockdown 8.89655 ERR023146 head kidney normal 8.81473 SRR1523214 embryo glut12 morpholino 8.438360000000001 SRR1291414 5 dpi normal 8.39965 SRR516126 skin male and 5 month 8.24917 SRR1708343 embryo MUTAS 8.19796 SRR1167763 embryo ptpn6 morpholino and bacterial infection 8.061760000000001 SRR610741 3 dpf express Ras 7.82472 SRR516134 skin male and 5 month 7.77204 SRR516135 skin male and 5 month 7.75705 SRR527833 5 dpf normal 7.62683 SRR891511 brain normal 7.4951300000000005 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 7.471019999999999 SRR776510 embryo Salmonella infected and miR-146 knockdown 7.448110000000001 SRR800046 sphere stage 5azaCyD treatment 7.3933100000000005 SRR1291417 5 dpi injected marinum 7.37648 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 7.36612 SRR516128 skin male and 5 month 7.108410000000001 SRR519717 2 dpf FETOH treatment 6.8353600000000005 SRR700537 heart Gata4 morpholino 6.80657 SRR1188148 embryo Control PBS 0.5 hpi 6.750210000000001 SRR1188156 embryo Control PBS 4 hpi 6.69154 SRR1188152 embryo Insulin 0.5 hpi 6.58095 SRR942769 embryo myd88+/+ 6.40665 SRR1523211 embryo control morpholino 6.35058 SRR630463 5 dpf normal 6.31639 SRR1167762 embryo ptpn6 morpholino 6.31124 SRR630464 5 dpf injected epidermidis 6.23004 SRR516121 skin male and 3.5 year 6.2285 SRR519737 2 dpf VD3 treatment 6.17018 SRR942764 embryo myd88-/- 6.16474 SRR800049 sphere stage control treatment 6.14692 SRR1005530 embryo RPL11 morpholino 6.0935 SRR1167753 embryo bacterial infection 5.8012 SRR1205160 5dpf transgenic sqET20 and GFP+ 5.75784 SRR748488 sperm normal 5.57653 SRR1167752 embryo normal 5.5134 SRR1342216 embryo norml 5.51208 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 5.48736 SRR516127 skin male and 5 month 5.40568 SRR1028003 head normal 5.25884 SRR519722 4 dpf FETOH treatment 5.2087699999999995 SRR516122 skin male and 3.5 year 5.20359 SRR1562528 eye normal 5.19499 SRR1205154 5dpf transgenic sqET20 5.18157 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 5.09274 SRR065197 3 dpf U1C knockout 5.00149 SRR1342217 embryo infection with Mycobacterium marinum 4.97312 SRR514028 retina control morpholino 4.86279 SRR1562532 spleen normal 4.85335 SRR519742 4 dpf VD3 treatment 4.8051900000000005 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 4.79214 SRR1342218 embryo marco morpholino 4.78249 SRR1028002 head normal 4.6771199999999995 SRR535847 larvae normal 4.64522 SRR1028004 head normal 4.6433800000000005 SRR519747 6 dpf VD3 treatment 4.58922 SRR726542 5 dpf infection with control 4.41907 SRR726540 5 dpf normal 4.41504 SRR519732 7 dpf FETOH treatment 4.39074 SRR516124 skin male and 3.5 year 4.36751 SRR726541 5 dpf infection with Mycobacterium marinum 4.3217 SRR1562533 testis normal 4.31457 SRR1534349 larvae DMSO vehicle 4.29194 SRR516123 skin male and 3.5 year 4.2149 SRR535851 larvae normal 4.20568 SRR800043 sphere stage normal 4.18749 SRR535852 larvae hoxb1b mut 4.14905 SRR535849 larvae normal 4.135330000000001 SRR1188160 embryo Insulin 4 hpi 4.0902199999999995 SRR831692 embryo normal 3.87365 SRR535848 larvae hoxb1b mut 3.8285699999999996 SRR519727 6 dpf FETOH treatment 3.7282800000000003 SRR1534351 larvae 500 ug/l BDE47 treatment 3.72396 SRR594771 endothelium normal 3.7219300000000004 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.70435 SRR610742 3 dpf express NICD 3.68355 SRR1647679 head kidney normal 3.54224 SRR1167756 embryo mpeg1 morpholino 3.53199 SRR519752 7 dpf VD3 treatment 3.4915199999999995 SRR633550 larvae exposed to hypoxia stress 3.45995 SRR065196 3 dpf normal 3.3674 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.27515 SRR1647681 head kidney SVCV treatment 3.24143 SRR1005529 embryo control morpholino 3.10443 SRR801554 embryo control morpholino 3.09976 SRR1562529 intestine and pancreas normal 2.9590099999999997 ERR594418 retina transgenic flk1 and develop tumors 2.9108 SRR633516 larvae normal 2.90055 SRR1534350 larvae 5 ug/l BDE47 treatment 2.79905 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.7193099999999997 SRR535850 larvae hoxb1b mut 2.68073 SRR610740 3 dpf normal 2.6713299999999998 SRR801556 embryo RPS19 and p53 morpholino 2.58335 SRR700534 heart control morpholino 2.44814 SRR1039571 gastrointestinal diet 0.1 NPM 2.39926 SRR1569491 embryo normal 2.2018 SRR801555 embryo RPS19 morpholino 2.04914 SRR1039573 gastrointestinal diet 0.75 NPM 1.8499400000000001 SRR594769 blood normal 1.84585 SRR1562531 muscle normal 1.80424 SRR1569495 embryo normal 1.69753 SRR514030 retina id2a morpholino 1.61212 ERR594417 retina normal 1.55551 ERR594416 retina transgenic flk1 1.54559 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.53627 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.51094 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.49346 SRR1035237 liver transgenic UHRF1 1.3408200000000001 SRR633544 larvae exposed to cold stress 1.21064 SRR1647680 head kidney SVCV treatment 1.09029 SRR1648856 brain normal 0.9924850000000001 SRR891504 liver normal 0.9880959999999999 SRR800045 muscle normal 0.855456 SRR891510 muscle normal 0.824742 SRR891512 blood normal 0.7134560000000001 SRR1035239 liver transgenic mCherry control 0.689014 SRR1562530 liver normal 0.587448 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.49078599999999994 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.458104 SRR1647683 spleen SVCV treatment 0.32449 SRR1647684 spleen SVCV treatment 0.313627 SRR891495 heart normal 0.241537 SRR1648854 brain normal 0.141938 SRR1647682 spleen normal 0.137345 SRR1648855 brain normal 0.09980089999999998 SRR372802 5 dpf normal 0.0810566 SRR957181 heart normal 0.0706172 ERR023145 heart normal 0.070219 SRR372796 bud normal 0.056299800000000004 SRR372791 dome normal 0.039837199999999996 SRR372800 2 dpf normal 0.028658 SRR1621206 embryo normal 0.00977756 SRR1049814 256 cell normal 0.00694326