sample tissue condition fpkm SRR1205160 5dpf transgenic sqET20 and GFP+ 69.661 ERR023144 brain normal 52.1121 ERR023143 swim bladder normal 39.8134 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 36.4124 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 35.4119 SRR630463 5 dpf normal 32.9196 SRR630464 5 dpf injected epidermidis 32.0772 ERR023145 heart normal 31.9628 SRR1291417 5 dpi injected marinum 31.4243 ERR023146 head kidney normal 30.9431 ERR594417 retina normal 30.2625 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 29.4838 SRR1205154 5dpf transgenic sqET20 28.554000000000002 SRR516122 skin male and 3.5 year 27.0075 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 25.8174 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 24.6198 SRR941749 anterior pectoral fin normal 24.3465 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 23.2944 SRR1291414 5 dpi normal 22.2426 SRR516124 skin male and 3.5 year 21.9789 SRR1028002 head normal 21.7562 ERR594416 retina transgenic flk1 20.8821 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 20.3219 SRR1028004 head normal 19.6782 SRR1167753 embryo bacterial infection 19.3419 SRR1562530 liver normal 18.9958 SRR1035239 liver transgenic mCherry control 18.7746 SRR535849 larvae normal 18.6763 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 18.2958 SRR516125 skin male and 3.5 year 18.2029 SRR941753 posterior pectoral fin normal 17.6785 SRR535847 larvae normal 17.423 SRR516123 skin male and 3.5 year 17.0041 SRR1299124 caudal fin Zero day time after treatment 16.9778 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 16.408 SRR592700 pineal gland normal 16.0951 SRR942769 embryo myd88+/+ 15.7467 SRR516133 skin male and 5 month 15.7115 SRR1342218 embryo marco morpholino 15.5444 SRR535851 larvae normal 15.5049 SRR516121 skin male and 3.5 year 15.2667 SRR535852 larvae hoxb1b mut 14.7583 SRR1342216 embryo norml 14.6427 SRR519732 7 dpf FETOH treatment 14.5784 SRR1562528 eye normal 14.5433 SRR519727 6 dpf FETOH treatment 14.5288 SRR535850 larvae hoxb1b mut 14.3518 SRR1342217 embryo infection with Mycobacterium marinum 14.2943 SRR942764 embryo myd88-/- 14.1874 SRR592701 pineal gland normal 14.1317 SRR519747 6 dpf VD3 treatment 13.9809 SRR1167752 embryo normal 13.9068 SRR1562532 spleen normal 13.4981 SRR535848 larvae hoxb1b mut 13.4071 SRR1028003 head normal 13.2472 SRR1167757 embryo mpeg1 morpholino and bacterial infection 13.052 SRR1167762 embryo ptpn6 morpholino 12.9109 SRR1534349 larvae DMSO vehicle 12.667 SRR1167763 embryo ptpn6 morpholino and bacterial infection 12.6464 SRR519752 7 dpf VD3 treatment 12.5523 SRR516129 skin male and 5 month 12.5479 SRR1534351 larvae 500 ug/l BDE47 treatment 12.5129 SRR516134 skin male and 5 month 12.2155 SRR1167756 embryo mpeg1 morpholino 10.9219 SRR592702 pineal gland normal 10.7022 SRR1188148 embryo Control PBS 0.5 hpi 10.6212 SRR527834 head normal 10.3797 SRR1534350 larvae 5 ug/l BDE47 treatment 10.3294 SRR1562529 intestine and pancreas normal 9.74138 SRR1188156 embryo Control PBS 4 hpi 9.24992 SRR1562533 testis normal 9.22467 SRR516126 skin male and 5 month 9.12841 SRR1188152 embryo Insulin 0.5 hpi 9.06555 SRR1188160 embryo Insulin 4 hpi 9.020760000000001 SRR610741 3 dpf express Ras 8.967369999999999 SRR610742 3 dpf express NICD 8.95491 SRR726542 5 dpf infection with control 8.94495 SRR1523214 embryo glut12 morpholino 8.90548 SRR726541 5 dpf infection with Mycobacterium marinum 8.73385 SRR726540 5 dpf normal 8.47744 SRR516131 skin male and 5 month 8.464210000000001 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 8.01079 SRR633516 larvae normal 7.721480000000001 SRR1299129 caudal fin Seven days time after treatment 7.65763 SRR519722 4 dpf FETOH treatment 7.62732 SRR1562531 muscle normal 7.52785 SRR592703 pineal gland normal 7.49936 SRR594771 endothelium normal 7.45843 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 7.33771 SRR633550 larvae exposed to hypoxia stress 7.33171 SRR527833 5 dpf normal 7.2400899999999995 SRR1299128 caudal fin Three days time after treatment 7.163460000000001 SRR594769 blood normal 7.16061 SRR516135 skin male and 5 month 7.118930000000001 SRR1523211 embryo control morpholino 7.111610000000001 SRR516132 skin male and 5 month 7.103269999999999 SRR1299127 caudal fin Two days time after treatment 6.9614899999999995 SRR1647682 spleen normal 6.58931 SRR1299126 caudal fin One day time after treatment 6.53037 SRR516130 skin male and 5 month 6.45515 SRR592699 pineal gland normal 6.41414 SRR1048059 pineal gland light 6.39496 SRR1647683 spleen SVCV treatment 6.22346 SRR516128 skin male and 5 month 6.2026 SRR891511 brain normal 6.19878 SRR700534 heart control morpholino 6.1874400000000005 SRR519742 4 dpf VD3 treatment 6.17459 SRR1647679 head kidney normal 6.12668 SRR1048061 pineal gland dark 6.09181 SRR610740 3 dpf normal 5.872669999999999 SRR516127 skin male and 5 month 5.8613 SRR1647680 head kidney SVCV treatment 5.83715 SRR891504 liver normal 5.68812 SRR592698 pineal gland normal 5.50809 SRR1565809 brain normal 5.28126 ERR594418 retina transgenic flk1 and develop tumors 5.20832 SRR831692 embryo normal 5.0206800000000005 SRR1565811 brain normal 4.77568 SRR1647681 head kidney SVCV treatment 4.67842 SRR1565817 brain normal 4.66673 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 4.65917 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 4.6189 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 4.53823 SRR1039571 gastrointestinal diet 0.1 NPM 4.272869999999999 SRR700537 heart Gata4 morpholino 4.157 SRR1565819 brain normal 3.9954400000000003 SRR776507 embryo normal 3.82858 SRR776509 embryo Salmonella infected 3.81946 SRR633544 larvae exposed to cold stress 3.7587699999999997 SRR1647684 spleen SVCV treatment 3.6829300000000003 SRR514028 retina control morpholino 3.6442300000000003 SRR1039573 gastrointestinal diet 0.75 NPM 3.5865099999999996 SRR065196 3 dpf normal 3.57838 SRR800045 muscle normal 3.5194099999999997 SRR776510 embryo Salmonella infected and miR-146 knockdown 3.3505199999999995 SRR1565815 brain normal 3.28824 SRR749514 24 hpf normal 3.17429 SRR776508 embryo miR-146 knockdown 3.1712700000000003 SRR1299125 caudal fin Half day time after treatment 3.02809 SRR891510 muscle normal 3.02009 SRR658541 6 somite normal 2.94603 SRR1035237 liver transgenic UHRF1 2.93339 SRR1565805 brain normal 2.90483 SRR065197 3 dpf U1C knockout 2.77638 SRR1565813 brain normal 2.69097 SRR1565807 brain normal 2.5548599999999997 SRR519737 2 dpf VD3 treatment 2.54264 SRR891495 heart normal 2.52553 SRR749515 24 hpf eif3ha morphant 2.52553 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2.49103 SRR514030 retina id2a morpholino 2.42654 SRR658545 6 somite Gata6 morphant 2.35454 SRR519717 2 dpf FETOH treatment 2.2444 SRR658547 6 somite Gata5/6 morphant 2.11666 SRR658543 6 somite Gata5 morphan 2.09417 SRR535978 larvae normal 1.8454400000000002 SRR748488 sperm normal 1.7630299999999999 SRR797914 embryo pbx2/4-MO 1.7462900000000001 SRR535890 larvae normal 1.74347 SRR535913 larvae krox mut 1.73186 SRR797908 embryo normal 1.70029 SRR038624 embryo traf6 morpholino and bacterial infection 1.6954599999999997 SRR1104058 heart normal 1.65829 SRR658535 bud Gata5 morphant 1.61914 SRR1004788 larvae impdh1b morpholino 1.58691 SRR535943 larvae vangl mut 1.5827 SRR535986 larvae nhsl1b mut 1.56582 SRR527835 tail normal 1.52542 SRR658537 bud Gata6 morphant 1.4646 SRR527840 24hpf normal 1.46014 SRR038626 embryo control morpholino and bacterial infection 1.4151 SRR1104059 heart kctd10 mut 1.40399 SRR658533 bud normal 1.38963 SRR658539 bud Gata5/6 morphant 1.37313 SRR527832 16-36 hpf normal 1.3421299999999998 SRR797911 embryo prdm1-/- 1.31887 SRR038625 embryo traf6 morpholino 1.31762 SRR527836 24hpf normal 1.268 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.2577399999999999 SRR535926 larvae normal 1.20716 SRR1708344 embryo MUTPS 1.16983 SRR1004789 larvae impdh2 morpholino 1.1683700000000001 SRR1004786 larvae control morpholino 1.06761 SRR038627 embryo control morpholino 1.03564 SRR1021215 sphere stage Mzeomesa 1.0033100000000001 SRR1708343 embryo MUTAS 0.977541 SRR527844 24hpf normal 0.967174 SRR1708345 embryo SIBAS 0.963482 SRR891512 blood normal 0.9051799999999999 SRR1569495 embryo normal 0.8639450000000001 SRR1569491 embryo normal 0.858296 SRR1708346 embryo SIBPS 0.81877 SRR1004785 larvae normal 0.6885640000000001 SRR1004787 larvae impdh1a morpholino 0.653813 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.545971 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.486001 SRR1035978 13 hpf rx3-/- 0.475803 SRR1021213 sphere stage normal 0.422785 SRR1005529 embryo control morpholino 0.422308 SRR801554 embryo control morpholino 0.421674 SRR1005530 embryo RPL11 morpholino 0.33372399999999997 SRR1035984 13 hpf normal 0.30144499999999996 SRR801555 embryo RPS19 morpholino 0.227525 SRR800046 sphere stage 5azaCyD treatment 0.22478 SRR801556 embryo RPS19 and p53 morpholino 0.21888200000000002 SRR748489 egg normal 0.21039899999999997 SRR748491 germ ring normal 0.191142 SRR800043 sphere stage normal 0.11758099999999999 SRR800049 sphere stage control treatment 0.0704305 SRR748490 1 kcell normal 0.0115538