sample tissue condition fpkm SRR1562529 intestine and pancreas normal 15.5602 SRR1562530 liver normal 11.41 SRR891504 liver normal 10.5275 SRR1035239 liver transgenic mCherry control 8.11497 SRR1039573 gastrointestinal diet 0.75 NPM 7.822489999999999 ERR023146 head kidney normal 6.57631 SRR1039571 gastrointestinal diet 0.1 NPM 5.18352 SRR1647682 spleen normal 4.96355 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.78871 SRR535847 larvae normal 2.66971 SRR1342218 embryo marco morpholino 2.46378 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.41852 SRR519727 6 dpf FETOH treatment 2.4128 SRR519732 7 dpf FETOH treatment 2.36185 SRR1647681 head kidney SVCV treatment 2.32452 SRR630464 5 dpf injected epidermidis 2.25654 SRR1342216 embryo norml 2.18578 SRR1167756 embryo mpeg1 morpholino 2.1164 SRR535848 larvae hoxb1b mut 2.0851900000000003 SRR535852 larvae hoxb1b mut 2.04173 SRR372802 5 dpf normal 2.0092 SRR372800 2 dpf normal 2.0068200000000003 SRR1523214 embryo glut12 morpholino 1.94783 SRR372798 28 hpf normal 1.90232 SRR630463 5 dpf normal 1.86044 SRR1167752 embryo normal 1.82034 SRR372793 shield normal 1.7501900000000001 SRR658547 6 somite Gata5/6 morphant 1.73253 SRR535849 larvae normal 1.7215 SRR535850 larvae hoxb1b mut 1.6612 SRR749514 24 hpf normal 1.65095 SRR1291417 5 dpi injected marinum 1.61321 SRR1342217 embryo infection with Mycobacterium marinum 1.5956700000000001 SRR527833 5 dpf normal 1.56776 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.55156 SRR1028002 head normal 1.49614 SRR1167753 embryo bacterial infection 1.4707299999999999 SRR1188160 embryo Insulin 4 hpi 1.44737 SRR1291414 5 dpi normal 1.4415200000000001 SRR726542 5 dpf infection with control 1.38324 SRR535851 larvae normal 1.36917 SRR610740 3 dpf normal 1.3193700000000002 SRR658543 6 somite Gata5 morphan 1.31935 SRR610742 3 dpf express NICD 1.29914 SRR726540 5 dpf normal 1.2625899999999999 SRR535926 larvae normal 1.21705 SRR1647683 spleen SVCV treatment 1.20774 SRR519747 6 dpf VD3 treatment 1.19254 SRR1188156 embryo Control PBS 4 hpi 1.1725299999999999 SRR658545 6 somite Gata6 morphant 1.16108 SRR726541 5 dpf infection with Mycobacterium marinum 1.12804 SRR942769 embryo myd88+/+ 1.10426 SRR658541 6 somite normal 1.1029200000000001 SRR1188152 embryo Insulin 0.5 hpi 1.06291 SRR527840 24hpf normal 1.05722 SRR519722 4 dpf FETOH treatment 1.02586 SRR831692 embryo normal 1.0006 SRR776507 embryo normal 0.9324959999999999 SRR519742 4 dpf VD3 treatment 0.930154 SRR1523211 embryo control morpholino 0.9046649999999999 ERR023145 heart normal 0.891605 SRR535943 larvae vangl mut 0.886703 SRR038627 embryo control morpholino 0.8861110000000001 SRR800046 sphere stage 5azaCyD treatment 0.881984 SRR658539 bud Gata5/6 morphant 0.8803479999999999 SRR527836 24hpf normal 0.873751 SRR610741 3 dpf express Ras 0.8638600000000001 SRR658535 bud Gata5 morphant 0.795682 SRR535986 larvae nhsl1b mut 0.767057 SRR519752 7 dpf VD3 treatment 0.75727 SRR942764 embryo myd88-/- 0.757239 SRR527835 tail normal 0.747183 SRR776509 embryo Salmonella infected 0.731446 SRR749515 24 hpf eif3ha morphant 0.721693 SRR519737 2 dpf VD3 treatment 0.7022149999999999 SRR527832 16-36 hpf normal 0.7010529999999999 SRR1188148 embryo Control PBS 0.5 hpi 0.698256 SRR797908 embryo normal 0.691878 SRR535978 larvae normal 0.670167 SRR700537 heart Gata4 morpholino 0.668914 SRR658537 bud Gata6 morphant 0.666524 SRR1534349 larvae DMSO vehicle 0.648037 SRR1028004 head normal 0.6399590000000001 SRR038626 embryo control morpholino and bacterial infection 0.617237 SRR372796 bud normal 0.605654 SRR1028003 head normal 0.603243 SRR1562532 spleen normal 0.5963350000000001 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.5886939999999999 SRR797914 embryo pbx2/4-MO 0.5844 SRR519717 2 dpf FETOH treatment 0.583242 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.5780029999999999 SRR1534351 larvae 500 ug/l BDE47 treatment 0.57148 SRR372791 dome normal 0.56258 ERR023143 swim bladder normal 0.559543 SRR1534350 larvae 5 ug/l BDE47 treatment 0.543552 SRR797911 embryo prdm1-/- 0.527824 SRR038625 embryo traf6 morpholino 0.526084 SRR1562528 eye normal 0.501005 SRR1104059 heart kctd10 mut 0.500318 SRR1035237 liver transgenic UHRF1 0.49591499999999994 SRR658533 bud normal 0.4915 SRR633516 larvae normal 0.46773000000000003 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.416336 SRR535890 larvae normal 0.41393199999999997 SRR1648856 brain normal 0.381091 SRR1647680 head kidney SVCV treatment 0.38051599999999997 SRR527834 head normal 0.379038 SRR633550 larvae exposed to hypoxia stress 0.361665 SRR1647684 spleen SVCV treatment 0.343733 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.341965 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.338225 SRR748491 germ ring normal 0.335922 SRR038624 embryo traf6 morpholino and bacterial infection 0.32268800000000003 SRR633544 larvae exposed to cold stress 0.317718 SRR891510 muscle normal 0.307183 SRR1104058 heart normal 0.30577600000000005 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.29725799999999997 SRR535913 larvae krox mut 0.270133 SRR776508 embryo miR-146 knockdown 0.268194 SRR527844 24hpf normal 0.266307 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.255969 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.255206 SRR1205154 5dpf transgenic sqET20 0.22719499999999998 SRR1004788 larvae impdh1b morpholino 0.202736 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.202518 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.19833499999999998 SRR065197 3 dpf U1C knockout 0.196101 SRR800049 sphere stage control treatment 0.192382 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.172976 SRR1167762 embryo ptpn6 morpholino 0.16128800000000001 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.15308 SRR891512 blood normal 0.144405 SRR1647679 head kidney normal 0.139272 SRR065196 3 dpf normal 0.138087 SRR1004789 larvae impdh2 morpholino 0.12044400000000001 SRR1562533 testis normal 0.11956300000000002 SRR1004786 larvae control morpholino 0.118775 SRR700534 heart control morpholino 0.116342 SRR1005530 embryo RPL11 morpholino 0.106123 SRR1708346 embryo SIBPS 0.09266669999999999 SRR1708345 embryo SIBAS 0.08890310000000001 SRR516124 skin male and 3.5 year 0.0807921 SRR801555 embryo RPS19 morpholino 0.06317880000000001 SRR748488 sperm normal 0.05776559999999999 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.057725599999999995 SRR1708343 embryo MUTAS 0.05676509999999999 SRR1648855 brain normal 0.0547861 SRR1035978 13 hpf rx3-/- 0.0505986 SRR1708344 embryo MUTPS 0.0500862 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.041057800000000005 ERR594418 retina transgenic flk1 and develop tumors 0.0406838 SRR516135 skin male and 5 month 0.0388957 SRR1562531 muscle normal 0.031811599999999995 SRR891511 brain normal 0.031517500000000004 SRR1004785 larvae normal 0.0296579 SRR800043 sphere stage normal 0.0277467 SRR594769 blood normal 0.0252232 SRR516129 skin male and 5 month 0.023950799999999998 SRR1299125 caudal fin Half day time after treatment 0.022206599999999996 SRR1648854 brain normal 0.0218795 SRR516126 skin male and 5 month 0.0215772 SRR1035984 13 hpf normal 0.021499400000000002 SRR1004787 larvae impdh1a morpholino 0.021402900000000002 SRR592701 pineal gland normal 0.020566900000000003 SRR941749 anterior pectoral fin normal 0.0195828 SRR516122 skin male and 3.5 year 0.0189828 SRR1021213 sphere stage normal 0.017607499999999998 SRR801556 embryo RPS19 and p53 morpholino 0.016905200000000002 SRR594771 endothelium normal 0.0152531 SRR1021215 sphere stage Mzeomesa 0.015108799999999999 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.014862 SRR516130 skin male and 5 month 0.0121197 SRR372787 2-4 cell normal 0.0101288 SRR516128 skin male and 5 month 0.00961432 SRR1299129 caudal fin Seven days time after treatment 0.00886557 SRR516123 skin male and 3.5 year 0.00871164 SRR800037 egg normal 0.00664059 SRR1569491 embryo normal 0.00487905 SRR1569495 embryo normal 0.00412983 SRR592702 pineal gland normal 0.00396975 SRR1565811 brain normal 0.00396829 SRR941753 posterior pectoral fin normal 0.00318803 SRR1565813 brain normal 0.00256938 SRR1621206 embryo normal 0.00248656 ERR594416 retina transgenic flk1 0.00237527 SRR1565809 brain normal 0.00219148 SRR1565819 brain normal 0.00205015