sample tissue condition fpkm SRR1028002 head normal 36.5455 SRR592703 pineal gland normal 31.3464 SRR1028004 head normal 30.7377 SRR941749 anterior pectoral fin normal 25.541 SRR1565819 brain normal 25.4277 SRR941753 posterior pectoral fin normal 23.877 SRR1565811 brain normal 23.8274 SRR1028003 head normal 23.2218 SRR1565815 brain normal 22.4587 SRR1565807 brain normal 22.1225 SRR1048061 pineal gland dark 21.8383 SRR1565805 brain normal 21.6745 SRR1565817 brain normal 20.9138 SRR1565809 brain normal 20.4334 SRR1048059 pineal gland light 20.320999999999998 SRR726540 5 dpf normal 20.232 SRR831692 embryo normal 20.0384 SRR1188156 embryo Control PBS 4 hpi 18.6962 SRR535851 larvae normal 18.1469 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 17.2155 SRR1565813 brain normal 16.935 SRR1205154 5dpf transgenic sqET20 16.1435 SRR592700 pineal gland normal 15.79 SRR1167752 embryo normal 15.731 SRR726541 5 dpf infection with Mycobacterium marinum 15.7004 SRR1167762 embryo ptpn6 morpholino 15.4859 SRR1205160 5dpf transgenic sqET20 and GFP+ 15.4643 SRR1562531 muscle normal 15.3608 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 15.2776 SRR630463 5 dpf normal 14.8296 SRR535848 larvae hoxb1b mut 14.8215 SRR516130 skin male and 5 month 14.7004 SRR942769 embryo myd88+/+ 14.5155 SRR516134 skin male and 5 month 14.213 SRR630464 5 dpf injected epidermidis 14.1436 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 14.1112 SRR535852 larvae hoxb1b mut 13.9575 SRR592698 pineal gland normal 13.6682 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 13.5113 SRR516121 skin male and 3.5 year 13.3509 SRR1167763 embryo ptpn6 morpholino and bacterial infection 13.2509 SRR1167757 embryo mpeg1 morpholino and bacterial infection 13.046 SRR372802 5 dpf normal 13.0346 SRR535847 larvae normal 13.0239 ERR594417 retina normal 12.9871 SRR1167753 embryo bacterial infection 12.7608 SRR633544 larvae exposed to cold stress 12.7605 SRR535850 larvae hoxb1b mut 12.5571 SRR516124 skin male and 3.5 year 12.4228 SRR1188148 embryo Control PBS 0.5 hpi 12.3987 SRR942764 embryo myd88-/- 12.3523 SRR1523214 embryo glut12 morpholino 12.2957 SRR610740 3 dpf normal 12.207 SRR065196 3 dpf normal 11.7466 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 11.703 SRR1167756 embryo mpeg1 morpholino 11.6323 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 11.5915 SRR1188152 embryo Insulin 0.5 hpi 11.4504 SRR527833 5 dpf normal 11.3408 SRR535849 larvae normal 11.0092 SRR516127 skin male and 5 month 10.9871 SRR1342218 embryo marco morpholino 10.9152 SRR065197 3 dpf U1C knockout 10.8927 SRR527834 head normal 10.7788 SRR372787 2-4 cell normal 10.5765 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 10.5351 SRR886457 512 cell 4-thio-UTP metabolic labeling 10.5257 SRR516135 skin male and 5 month 10.3337 ERR594416 retina transgenic flk1 10.2815 SRR1534350 larvae 5 ug/l BDE47 treatment 10.2584 SRR1049814 256 cell normal 10.1338 SRR1562532 spleen normal 10.1092 SRR726542 5 dpf infection with control 10.0228 SRR1708343 embryo MUTAS 9.982610000000001 SRR592701 pineal gland normal 9.97406 SRR886456 256 cell 4-thio-UTP metabolic labeling 9.929030000000001 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 9.856580000000001 SRR516123 skin male and 3.5 year 9.77705 SRR1342216 embryo norml 9.68247 SRR1569495 embryo normal 9.67855 SRR516126 skin male and 5 month 9.56868 SRR1005529 embryo control morpholino 9.48268 SRR891511 brain normal 9.47803 SRR801554 embryo control morpholino 9.46862 SRR1188160 embryo Insulin 4 hpi 9.36458 SRR748490 1 kcell normal 9.1499 SRR592699 pineal gland normal 8.96615 SRR592702 pineal gland normal 8.95565 SRR1534349 larvae DMSO vehicle 8.68869 SRR633550 larvae exposed to hypoxia stress 8.68794 SRR516128 skin male and 5 month 8.56282 SRR633516 larvae normal 8.56064 ERR594418 retina transgenic flk1 and develop tumors 8.43972 SRR1562528 eye normal 8.35104 SRR610741 3 dpf express Ras 8.25093 SRR1342217 embryo infection with Mycobacterium marinum 8.20594 SRR1534351 larvae 500 ug/l BDE47 treatment 7.94344 SRR748489 egg normal 7.90623 SRR535913 larvae krox mut 7.77653 SRR800045 muscle normal 7.612010000000001 SRR516133 skin male and 5 month 7.26394 SRR535890 larvae normal 7.04237 SRR610742 3 dpf express NICD 7.03032 SRR1648856 brain normal 6.94946 ERR023144 brain normal 6.9215100000000005 SRR516125 skin male and 3.5 year 6.91493 SRR516122 skin male and 3.5 year 6.909110000000001 SRR038624 embryo traf6 morpholino and bacterial infection 6.87863 SRR800043 sphere stage normal 6.780139999999999 SRR038627 embryo control morpholino 6.74808 SRR1708346 embryo SIBPS 6.623989999999999 SRR886455 128 cell 4-thio-UTP metabolic labeling 6.61522 SRR519722 4 dpf FETOH treatment 6.61187 SRR797911 embryo prdm1-/- 6.5397 SRR1621206 embryo normal 6.47421 SRR1708345 embryo SIBAS 6.42848 SRR519732 7 dpf FETOH treatment 6.309480000000001 SRR1299124 caudal fin Zero day time after treatment 6.29212 SRR1104058 heart normal 6.15003 SRR1104059 heart kctd10 mut 6.01626 SRR1291417 5 dpi injected marinum 5.98081 SRR797917 embryo pbx2/4-MO and prdm1-/- 5.97884 SRR519727 6 dpf FETOH treatment 5.90104 SRR801556 embryo RPS19 and p53 morpholino 5.89147 SRR1299128 caudal fin Three days time after treatment 5.80922 SRR594771 endothelium normal 5.77024 SRR1021213 sphere stage normal 5.62769 SRR038625 embryo traf6 morpholino 5.620419999999999 SRR372789 1K cell normal 5.55449 SRR519752 7 dpf VD3 treatment 5.489 SRR535943 larvae vangl mut 5.38134 SRR891510 muscle normal 5.330430000000001 SRR1523211 embryo control morpholino 5.32303 SRR519742 4 dpf VD3 treatment 5.29291 SRR801555 embryo RPS19 morpholino 5.27424 SRR519747 6 dpf VD3 treatment 5.19369 SRR776510 embryo Salmonella infected and miR-146 knockdown 5.187469999999999 SRR519737 2 dpf VD3 treatment 5.159730000000001 SRR957180 heart 7 days after heart tip amputation 5.11974 SRR1648854 brain normal 5.04624 SRR797914 embryo pbx2/4-MO 4.92772 SRR1648855 brain normal 4.9243 SRR519717 2 dpf FETOH treatment 4.91988 SRR797908 embryo normal 4.875030000000001 SRR1004789 larvae impdh2 morpholino 4.85837 SRR1291414 5 dpi normal 4.77997 SRR516131 skin male and 5 month 4.56966 SRR800037 egg normal 4.5172 SRR1708344 embryo MUTPS 4.51673 SRR1035978 13 hpf rx3-/- 4.45522 SRR535926 larvae normal 4.44072 SRR658541 6 somite normal 4.40091 SRR516132 skin male and 5 month 4.39316 SRR1004785 larvae normal 4.317769999999999 SRR1562529 intestine and pancreas normal 4.2519 SRR1004788 larvae impdh1b morpholino 4.24254 SRR527835 tail normal 4.1254800000000005 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 4.11474 SRR800049 sphere stage control treatment 4.10567 SRR1299129 caudal fin Seven days time after treatment 4.08434 SRR1005530 embryo RPL11 morpholino 4.07825 SRR1647682 spleen normal 3.76785 SRR1647680 head kidney SVCV treatment 3.75126 SRR749514 24 hpf normal 3.7012 SRR658543 6 somite Gata5 morphan 3.6787 SRR658545 6 somite Gata6 morphant 3.6440699999999997 SRR658547 6 somite Gata5/6 morphant 3.61835 SRR957181 heart normal 3.5555800000000004 SRR527832 16-36 hpf normal 3.50089 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.4621 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 3.4392 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 3.4011099999999996 SRR1569491 embryo normal 3.3864900000000002 SRR1004787 larvae impdh1a morpholino 3.36306 SRR594769 blood normal 3.34311 SRR776508 embryo miR-146 knockdown 3.25414 SRR1004786 larvae control morpholino 3.1867400000000004 SRR748488 sperm normal 3.1465 SRR514028 retina control morpholino 3.05883 ERR023143 swim bladder normal 2.87164 SRR372800 2 dpf normal 2.86003 SRR038626 embryo control morpholino and bacterial infection 2.8061599999999998 SRR372796 bud normal 2.7774900000000002 SRR749515 24 hpf eif3ha morphant 2.715 SRR1647683 spleen SVCV treatment 2.56799 SRR1021215 sphere stage Mzeomesa 2.56088 SRR1035984 13 hpf normal 2.49919 SRR700537 heart Gata4 morpholino 2.2077400000000003 SRR1299127 caudal fin Two days time after treatment 2.16609 SRR372791 dome normal 2.16282 SRR700534 heart control morpholino 2.06201 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.0285 SRR776507 embryo normal 1.9818 SRR748491 germ ring normal 1.96787 SRR514030 retina id2a morpholino 1.95255 SRR658533 bud normal 1.9398 SRR1299126 caudal fin One day time after treatment 1.9176799999999998 SRR658537 bud Gata6 morphant 1.91057 SRR1647684 spleen SVCV treatment 1.78025 SRR372793 shield normal 1.69973 SRR516129 skin male and 5 month 1.67239 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.5709600000000001 SRR1647679 head kidney normal 1.55898 SRR891512 blood normal 1.50765 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.4344299999999999 SRR658535 bud Gata5 morphant 1.4297600000000001 SRR372798 28 hpf normal 1.3933799999999998 SRR527836 24hpf normal 1.34122 SRR891495 heart normal 1.25785 SRR658539 bud Gata5/6 morphant 1.19245 SRR527844 24hpf normal 1.11944 SRR776509 embryo Salmonella infected 1.0703799999999999 SRR1562533 testis normal 1.05721 SRR1647681 head kidney SVCV treatment 1.05159 ERR023146 head kidney normal 0.998935 SRR1562530 liver normal 0.9571639999999999 ERR023145 heart normal 0.930679 SRR527840 24hpf normal 0.8080930000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.689647 SRR1035237 liver transgenic UHRF1 0.62166 SRR1035239 liver transgenic mCherry control 0.528014 SRR535978 larvae normal 0.498737 SRR1039571 gastrointestinal diet 0.1 NPM 0.46934 SRR535986 larvae nhsl1b mut 0.404383 SRR1039573 gastrointestinal diet 0.75 NPM 0.28295 SRR1299125 caudal fin Half day time after treatment 0.267146 SRR800046 sphere stage 5azaCyD treatment 0.232348