sample tissue condition fpkm SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 26.9193 SRR1205154 5dpf transgenic sqET20 24.7514 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 23.2888 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 22.3031 ERR594418 retina transgenic flk1 and develop tumors 20.8836 SRR514030 retina id2a morpholino 18.8908 SRR514028 retina control morpholino 18.6018 SRR594771 endothelium normal 16.7584 SRR776507 embryo normal 13.2647 SRR1708345 embryo SIBAS 12.0328 SRR630463 5 dpf normal 11.8467 SRR776509 embryo Salmonella infected 11.8052 SRR630464 5 dpf injected epidermidis 11.7071 SRR776508 embryo miR-146 knockdown 10.6385 SRR1569495 embryo normal 10.5573 SRR535978 larvae normal 10.4521 SRR1167752 embryo normal 10.2885 SRR1104058 heart normal 10.2735 SRR535986 larvae nhsl1b mut 9.85622 ERR023144 brain normal 9.47441 SRR1342218 embryo marco morpholino 9.2321 SRR519717 2 dpf FETOH treatment 9.20241 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 9.13289 SRR1342216 embryo norml 9.06712 SRR519737 2 dpf VD3 treatment 8.84875 SRR942769 embryo myd88+/+ 8.84571 SRR1104059 heart kctd10 mut 8.556410000000001 SRR1167753 embryo bacterial infection 8.50446 SRR1708343 embryo MUTAS 8.48168 SRR065196 3 dpf normal 8.35656 SRR1167756 embryo mpeg1 morpholino 8.23758 SRR776510 embryo Salmonella infected and miR-146 knockdown 8.047789999999999 SRR1205160 5dpf transgenic sqET20 and GFP+ 7.97686 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 7.957089999999999 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 7.87145 SRR1342217 embryo infection with Mycobacterium marinum 7.811789999999999 SRR1167762 embryo ptpn6 morpholino 7.59485 SRR831692 embryo normal 7.56826 SRR1167757 embryo mpeg1 morpholino and bacterial infection 7.536910000000001 SRR1523214 embryo glut12 morpholino 7.416410000000001 SRR942764 embryo myd88-/- 7.32528 SRR1565805 brain normal 7.18283 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 6.98548 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 6.96373 SRR658547 6 somite Gata5/6 morphant 6.88587 SRR1565807 brain normal 6.86862 SRR1291417 5 dpi injected marinum 6.773060000000001 SRR1167763 embryo ptpn6 morpholino and bacterial infection 6.768789999999999 SRR1299128 caudal fin Three days time after treatment 6.670789999999999 SRR038627 embryo control morpholino 6.58487 SRR1188152 embryo Insulin 0.5 hpi 6.52128 ERR023143 swim bladder normal 6.489719999999999 SRR1291414 5 dpi normal 6.45881 SRR726540 5 dpf normal 6.45 SRR519752 7 dpf VD3 treatment 6.3255300000000005 SRR527833 5 dpf normal 6.32394 SRR1188160 embryo Insulin 4 hpi 6.2811 SRR594769 blood normal 6.27029 SRR658543 6 somite Gata5 morphan 6.18764 SRR519747 6 dpf VD3 treatment 6.14315 SRR658545 6 somite Gata6 morphant 6.12254 SRR1523211 embryo control morpholino 6.09083 SRR038625 embryo traf6 morpholino 6.07855 SRR797914 embryo pbx2/4-MO 6.043419999999999 SRR065197 3 dpf U1C knockout 6.0026 SRR1569491 embryo normal 5.98923 SRR658533 bud normal 5.928640000000001 SRR658541 6 somite normal 5.88973 SRR633516 larvae normal 5.85384 SRR535851 larvae normal 5.75405 SRR633550 larvae exposed to hypoxia stress 5.74107 SRR1299127 caudal fin Two days time after treatment 5.73685 SRR535847 larvae normal 5.73566 SRR797908 embryo normal 5.71991 SRR535943 larvae vangl mut 5.67425 SRR1565813 brain normal 5.67122 SRR1565815 brain normal 5.66453 SRR535926 larvae normal 5.63908 SRR1565817 brain normal 5.5961099999999995 SRR797911 embryo prdm1-/- 5.5667800000000005 SRR797917 embryo pbx2/4-MO and prdm1-/- 5.5502 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 5.4909300000000005 SRR527840 24hpf normal 5.40196 SRR658535 bud Gata5 morphant 5.37442 SRR1188148 embryo Control PBS 0.5 hpi 5.35527 SRR535849 larvae normal 5.32683 SRR1565819 brain normal 5.30328 SRR535848 larvae hoxb1b mut 5.28874 SRR527836 24hpf normal 5.28782 SRR658539 bud Gata5/6 morphant 5.2626800000000005 SRR527832 16-36 hpf normal 5.2042 SRR610742 3 dpf express NICD 5.15465 SRR749514 24 hpf normal 5.134869999999999 SRR610740 3 dpf normal 5.127619999999999 SRR1565809 brain normal 5.12297 SRR535913 larvae krox mut 5.10736 SRR1299129 caudal fin Seven days time after treatment 5.02334 SRR535852 larvae hoxb1b mut 4.96371 SRR1028004 head normal 4.95481 SRR535850 larvae hoxb1b mut 4.9523 SRR535890 larvae normal 4.89529 SRR1708346 embryo SIBPS 4.88503 SRR1188156 embryo Control PBS 4 hpi 4.86428 SRR038626 embryo control morpholino and bacterial infection 4.834919999999999 SRR726541 5 dpf infection with Mycobacterium marinum 4.82801 SRR038624 embryo traf6 morpholino and bacterial infection 4.80296 SRR749515 24 hpf eif3ha morphant 4.66045 SRR726542 5 dpf infection with control 4.49688 SRR633544 larvae exposed to cold stress 4.48963 SRR610741 3 dpf express Ras 4.433 SRR700537 heart Gata4 morpholino 4.396719999999999 SRR519742 4 dpf VD3 treatment 4.37485 SRR1028002 head normal 4.37164 SRR519727 6 dpf FETOH treatment 4.34889 SRR1021215 sphere stage Mzeomesa 4.26178 SRR1028003 head normal 4.2506699999999995 SRR1021213 sphere stage normal 4.14743 SRR519722 4 dpf FETOH treatment 4.14537 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 4.14299 SRR658537 bud Gata6 morphant 4.0004 SRR1565811 brain normal 3.9453199999999997 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.9436699999999996 SRR1708344 embryo MUTPS 3.8199699999999996 SRR519732 7 dpf FETOH treatment 3.7038300000000004 SRR516126 skin male and 5 month 3.6960599999999997 SRR1035978 13 hpf rx3-/- 3.6890699999999996 SRR1534350 larvae 5 ug/l BDE47 treatment 3.60017 SRR516127 skin male and 5 month 3.5712900000000003 SRR1299126 caudal fin One day time after treatment 3.51355 SRR516130 skin male and 5 month 3.46729 SRR1005529 embryo control morpholino 3.4253 SRR801554 embryo control morpholino 3.4201599999999996 SRR527844 24hpf normal 3.3465199999999995 SRR1534349 larvae DMSO vehicle 3.2986699999999995 SRR1004786 larvae control morpholino 3.18824 SRR516128 skin male and 5 month 3.16871 ERR594416 retina transgenic flk1 3.14717 SRR700534 heart control morpholino 3.14375 SRR1299125 caudal fin Half day time after treatment 2.9773400000000003 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.97091 ERR023146 head kidney normal 2.96536 SRR1299124 caudal fin Zero day time after treatment 2.9390400000000003 SRR801556 embryo RPS19 and p53 morpholino 2.71305 SRR1534351 larvae 500 ug/l BDE47 treatment 2.6793400000000003 SRR1004788 larvae impdh1b morpholino 2.67581 SRR516134 skin male and 5 month 2.6697 SRR516129 skin male and 5 month 2.5371200000000003 SRR941749 anterior pectoral fin normal 2.46653 SRR1004785 larvae normal 2.27625 SRR801555 embryo RPS19 morpholino 2.20087 SRR516123 skin male and 3.5 year 2.1163 SRR516133 skin male and 5 month 2.10473 SRR1005530 embryo RPL11 morpholino 2.09602 SRR516131 skin male and 5 month 2.05233 SRR592699 pineal gland normal 2.02333 SRR748491 germ ring normal 2.0133400000000004 SRR516121 skin male and 3.5 year 1.9744 ERR594417 retina normal 1.9370900000000002 SRR1562532 spleen normal 1.8748099999999999 SRR941753 posterior pectoral fin normal 1.8740700000000001 SRR527834 head normal 1.8174700000000001 SRR1004787 larvae impdh1a morpholino 1.80197 SRR516124 skin male and 3.5 year 1.7334900000000002 SRR516125 skin male and 3.5 year 1.7305099999999998 ERR023145 heart normal 1.6854099999999999 SRR516122 skin male and 3.5 year 1.6825299999999999 SRR891511 brain normal 1.6544599999999998 SRR592700 pineal gland normal 1.6401400000000002 SRR592703 pineal gland normal 1.5886799999999999 SRR1035984 13 hpf normal 1.57394 SRR1562528 eye normal 1.57283 SRR1048059 pineal gland light 1.56532 SRR1562531 muscle normal 1.42408 SRR516135 skin male and 5 month 1.34325 SRR516132 skin male and 5 month 1.31385 SRR1004789 larvae impdh2 morpholino 1.27359 SRR592701 pineal gland normal 1.15042 SRR592698 pineal gland normal 1.1297 SRR592702 pineal gland normal 1.11867 SRR1048061 pineal gland dark 0.977188 SRR1562529 intestine and pancreas normal 0.9436389999999999 SRR1647680 head kidney SVCV treatment 0.877432 SRR1647681 head kidney SVCV treatment 0.68891 SRR1647679 head kidney normal 0.686526 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.611664 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.580983 SRR800046 sphere stage 5azaCyD treatment 0.558371 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.523454 SRR891510 muscle normal 0.504846 SRR1039571 gastrointestinal diet 0.1 NPM 0.480979 SRR891512 blood normal 0.45646499999999995 SRR891495 heart normal 0.40993199999999996 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.403318 SRR1647683 spleen SVCV treatment 0.362684 SRR1647682 spleen normal 0.360134 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.342791 SRR527835 tail normal 0.310892 SRR1035239 liver transgenic mCherry control 0.27821 SRR1562533 testis normal 0.276581 SRR1039573 gastrointestinal diet 0.75 NPM 0.255678 SRR1647684 spleen SVCV treatment 0.250237 SRR1035237 liver transgenic UHRF1 0.234913 SRR800045 muscle normal 0.135061 SRR800049 sphere stage control treatment 0.125614 SRR891504 liver normal 0.105573 SRR800043 sphere stage normal 0.099674 SRR1562530 liver normal 0.0785036 SRR748488 sperm normal 0.053520500000000006 SRR748489 egg normal 0.0486464 SRR372800 2 dpf normal 0.03532419999999999 SRR372802 5 dpf normal 0.028243200000000003 SRR1648854 brain normal 0.0196641 SRR372798 28 hpf normal 0.0184012 SRR748490 1 kcell normal 0.014772799999999997 SRR1648856 brain normal 0.0112276 SRR372796 bud normal 0.00963862 SRR957181 heart normal 0.00874713 SRR1648855 brain normal 0.0038840000000000003 SRR957180 heart 7 days after heart tip amputation 0.00384104 SRR372793 shield normal 0.00283834 SRR372791 dome normal 0.00116306 SRR372789 1K cell normal 0.000626781 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.5785900000000002e-06