sample tissue condition fpkm SRR1299129 caudal fin Seven days time after treatment 111.134 SRR1299125 caudal fin Half day time after treatment 109.821 SRR1299126 caudal fin One day time after treatment 96.264 SRR1299124 caudal fin Zero day time after treatment 86.5904 SRR1299127 caudal fin Two days time after treatment 75.863 SRR1299128 caudal fin Three days time after treatment 49.9139 ERR023146 head kidney normal 37.1807 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 36.906 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 33.7842 SRR941749 anterior pectoral fin normal 23.2765 ERR023143 swim bladder normal 22.5472 SRR1205160 5dpf transgenic sqET20 and GFP+ 22.1369 SRR1708346 embryo SIBPS 19.0828 SRR1021213 sphere stage normal 18.6577 SRR372787 2-4 cell normal 17.7496 SRR516123 skin male and 3.5 year 16.695999999999998 SRR1708344 embryo MUTPS 15.7884 SRR372791 dome normal 15.6093 SRR1021215 sphere stage Mzeomesa 15.392999999999999 SRR886456 256 cell 4-thio-UTP metabolic labeling 14.8582 SRR1167763 embryo ptpn6 morpholino and bacterial infection 14.8052 SRR800037 egg normal 14.4293 SRR516125 skin male and 3.5 year 14.3156 SRR516130 skin male and 5 month 14.0501 SRR658547 6 somite Gata5/6 morphant 13.7793 SRR658545 6 somite Gata6 morphant 13.6293 SRR372789 1K cell normal 13.5215 SRR516121 skin male and 3.5 year 13.5164 SRR1049814 256 cell normal 13.2309 SRR1621206 embryo normal 13.062000000000001 SRR372796 bud normal 12.9324 SRR658537 bud Gata6 morphant 12.6883 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 12.3628 SRR516122 skin male and 3.5 year 12.347000000000001 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 12.1607 SRR941753 posterior pectoral fin normal 12.0507 SRR748491 germ ring normal 11.4161 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 11.3964 SRR658533 bud normal 11.3591 SRR658541 6 somite normal 10.8525 SRR748489 egg normal 10.7809 SRR748490 1 kcell normal 10.589 SRR942764 embryo myd88-/- 10.0923 SRR516133 skin male and 5 month 9.754010000000001 SRR527840 24hpf normal 9.619819999999999 SRR516128 skin male and 5 month 9.570310000000001 SRR1167762 embryo ptpn6 morpholino 9.51085 SRR630464 5 dpf injected epidermidis 9.355310000000001 SRR1167756 embryo mpeg1 morpholino 8.92655 SRR658535 bud Gata5 morphant 8.88499 SRR516131 skin male and 5 month 8.81413 SRR658543 6 somite Gata5 morphan 8.784930000000001 SRR527836 24hpf normal 8.701939999999999 SRR1167753 embryo bacterial infection 8.691289999999999 SRR886455 128 cell 4-thio-UTP metabolic labeling 8.654580000000001 SRR630463 5 dpf normal 8.5619 SRR1167757 embryo mpeg1 morpholino and bacterial infection 8.38575 SRR1342218 embryo marco morpholino 8.3649 SRR1291417 5 dpi injected marinum 8.29664 SRR516126 skin male and 5 month 8.24607 SRR516134 skin male and 5 month 7.41366 SRR658539 bud Gata5/6 morphant 7.35538 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 7.3094399999999995 SRR527844 24hpf normal 7.295910000000001 SRR749515 24 hpf eif3ha morphant 7.1010800000000005 SRR1648856 brain normal 7.00712 SRR1167752 embryo normal 6.846360000000001 SRR1708345 embryo SIBAS 6.8322199999999995 SRR1342217 embryo infection with Mycobacterium marinum 6.79616 SRR942769 embryo myd88+/+ 6.687119999999999 SRR372798 28 hpf normal 6.644 SRR1534351 larvae 500 ug/l BDE47 treatment 6.52384 SRR516129 skin male and 5 month 6.35918 SRR372802 5 dpf normal 6.34858 SRR1648854 brain normal 6.3413699999999995 SRR886457 512 cell 4-thio-UTP metabolic labeling 6.08413 SRR1028002 head normal 5.8841 SRR1291414 5 dpi normal 5.85186 SRR1342216 embryo norml 5.70026 SRR749514 24 hpf normal 5.58919 SRR516127 skin male and 5 month 5.5537 SRR1562528 eye normal 5.4608300000000005 SRR800049 sphere stage control treatment 5.33131 SRR1188156 embryo Control PBS 4 hpi 5.32479 SRR1028003 head normal 5.2896 SRR1188152 embryo Insulin 0.5 hpi 5.21539 SRR776507 embryo normal 5.15148 SRR1188148 embryo Control PBS 0.5 hpi 4.92056 SRR372793 shield normal 4.7218599999999995 SRR527834 head normal 4.68698 SRR748488 sperm normal 4.6865 SRR1004786 larvae control morpholino 4.6806 SRR1708343 embryo MUTAS 4.66648 SRR776510 embryo Salmonella infected and miR-146 knockdown 4.60599 SRR1188160 embryo Insulin 4 hpi 4.52685 SRR516124 skin male and 3.5 year 4.50591 SRR1104059 heart kctd10 mut 4.36634 SRR372800 2 dpf normal 4.34386 SRR1523211 embryo control morpholino 4.3298 SRR1004788 larvae impdh1b morpholino 4.20188 SRR776508 embryo miR-146 knockdown 4.004569999999999 SRR1104058 heart normal 3.97939 SRR1035978 13 hpf rx3-/- 3.9226099999999997 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.8109 SRR1028004 head normal 3.70909 SRR535986 larvae nhsl1b mut 3.68782 SRR610741 3 dpf express Ras 3.5249 SRR1534350 larvae 5 ug/l BDE47 treatment 3.5220800000000003 ERR023145 heart normal 3.49091 SRR776509 embryo Salmonella infected 3.3127199999999997 SRR633550 larvae exposed to hypoxia stress 3.2560599999999997 SRR535848 larvae hoxb1b mut 3.14731 SRR535913 larvae krox mut 3.1464 SRR1005530 embryo RPL11 morpholino 3.06705 SRR535926 larvae normal 3.0400400000000003 SRR797911 embryo prdm1-/- 2.96254 SRR535851 larvae normal 2.76757 SRR535847 larvae normal 2.6400200000000003 SRR610742 3 dpf express NICD 2.53248 SRR535943 larvae vangl mut 2.50774 SRR1523214 embryo glut12 morpholino 2.50256 SRR535850 larvae hoxb1b mut 2.41553 SRR516135 skin male and 5 month 2.4152 SRR535978 larvae normal 2.37245 SRR535852 larvae hoxb1b mut 2.30325 SRR800046 sphere stage 5azaCyD treatment 2.22004 SRR535890 larvae normal 2.20131 SRR633516 larvae normal 2.15219 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.15097 SRR535849 larvae normal 2.13164 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.12268 SRR516132 skin male and 5 month 2.0777900000000002 SRR1035984 13 hpf normal 2.0626599999999997 SRR831692 embryo normal 2.0194799999999997 SRR797908 embryo normal 1.97943 SRR700537 heart Gata4 morpholino 1.96143 SRR1562533 testis normal 1.93305 SRR797914 embryo pbx2/4-MO 1.8947 SRR1005529 embryo control morpholino 1.8310799999999998 SRR801554 embryo control morpholino 1.82821 SRR519742 4 dpf VD3 treatment 1.8044099999999998 SRR519752 7 dpf VD3 treatment 1.8042 SRR800043 sphere stage normal 1.8007400000000002 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.7335200000000002 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.7062099999999998 SRR592700 pineal gland normal 1.60789 SRR1534349 larvae DMSO vehicle 1.5715 SRR519747 6 dpf VD3 treatment 1.53254 SRR801555 embryo RPS19 morpholino 1.5154 SRR610740 3 dpf normal 1.51275 SRR1562531 muscle normal 1.50522 ERR023144 brain normal 1.50474 SRR519722 4 dpf FETOH treatment 1.46436 SRR1004785 larvae normal 1.42489 SRR519732 7 dpf FETOH treatment 1.3656 SRR1048061 pineal gland dark 1.36465 SRR519727 6 dpf FETOH treatment 1.31979 SRR633544 larvae exposed to cold stress 1.30656 SRR065196 3 dpf normal 1.2634299999999998 SRR1648855 brain normal 1.24273 SRR527833 5 dpf normal 1.20622 SRR1647680 head kidney SVCV treatment 1.20274 SRR594771 endothelium normal 1.10676 SRR527835 tail normal 1.07511 SRR801556 embryo RPS19 and p53 morpholino 1.0509899999999999 SRR1205154 5dpf transgenic sqET20 0.84357 SRR592699 pineal gland normal 0.8005909999999999 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.753967 SRR519717 2 dpf FETOH treatment 0.7123010000000001 SRR527832 16-36 hpf normal 0.706863 SRR519737 2 dpf VD3 treatment 0.6636270000000001 SRR038625 embryo traf6 morpholino 0.595529 SRR592703 pineal gland normal 0.561066 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.553956 SRR038626 embryo control morpholino and bacterial infection 0.504885 SRR1647679 head kidney normal 0.468654 SRR592701 pineal gland normal 0.425121 SRR038624 embryo traf6 morpholino and bacterial infection 0.400005 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.387251 SRR065197 3 dpf U1C knockout 0.377811 SRR1647681 head kidney SVCV treatment 0.361105 SRR891511 brain normal 0.341167 ERR594418 retina transgenic flk1 and develop tumors 0.337501 SRR1565813 brain normal 0.311728 SRR1565807 brain normal 0.29537800000000003 SRR1004789 larvae impdh2 morpholino 0.293583 SRR514030 retina id2a morpholino 0.289476 SRR1035239 liver transgenic mCherry control 0.276471 SRR594769 blood normal 0.270444 SRR726540 5 dpf normal 0.266646 SRR1004787 larvae impdh1a morpholino 0.265206 SRR1565817 brain normal 0.25738099999999997 SRR592702 pineal gland normal 0.256832 ERR594416 retina transgenic flk1 0.256144 SRR592698 pineal gland normal 0.241893 SRR700534 heart control morpholino 0.22946 SRR1565805 brain normal 0.195864 SRR1565809 brain normal 0.18432300000000001 SRR1565815 brain normal 0.158958 SRR514028 retina control morpholino 0.147641 SRR1565811 brain normal 0.146977 SRR1569491 embryo normal 0.11886300000000001 ERR594417 retina normal 0.10772000000000001 SRR1565819 brain normal 0.0564021 SRR1039571 gastrointestinal diet 0.1 NPM 0.0498585