sample tissue condition fpkm ERR023143 swim bladder normal 75.0118 ERR023144 brain normal 64.0076 ERR023145 heart normal 40.5516 SRR372802 5 dpf normal 34.9256 ERR023146 head kidney normal 31.0336 SRR1648856 brain normal 28.8911 SRR592702 pineal gland normal 28.721 SRR1648854 brain normal 27.7338 SRR516133 skin male and 5 month 24.5381 SRR1534351 larvae 500 ug/l BDE47 treatment 24.0837 SRR592703 pineal gland normal 23.9782 SRR1534350 larvae 5 ug/l BDE47 treatment 20.2657 SRR1028004 head normal 20.1012 SRR941749 anterior pectoral fin normal 18.3647 SRR1562533 testis normal 18.3171 SRR1205160 5dpf transgenic sqET20 and GFP+ 17.5956 SRR1028002 head normal 17.2522 SRR516122 skin male and 3.5 year 17.0812 SRR1648855 brain normal 16.7886 SRR516123 skin male and 3.5 year 16.5203 SRR516121 skin male and 3.5 year 16.4142 SRR516132 skin male and 5 month 16.3103 SRR1299124 caudal fin Zero day time after treatment 16.2878 SRR516124 skin male and 3.5 year 15.8537 SRR941753 posterior pectoral fin normal 14.5619 SRR1299126 caudal fin One day time after treatment 14.1349 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 13.8333 SRR516125 skin male and 3.5 year 13.6092 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 13.4562 SRR527833 5 dpf normal 13.2961 SRR516131 skin male and 5 month 13.1657 SRR700537 heart Gata4 morpholino 12.6187 SRR592701 pineal gland normal 11.7156 SRR1534349 larvae DMSO vehicle 11.7003 SRR776510 embryo Salmonella infected and miR-146 knockdown 11.5648 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 11.4264 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 11.4047 SRR942769 embryo myd88+/+ 11.3949 SRR516128 skin male and 5 month 11.2016 SRR1104059 heart kctd10 mut 11.0835 SRR1104058 heart normal 11.0223 SRR630464 5 dpf injected epidermidis 10.9496 SRR1291414 5 dpi normal 10.9078 SRR592699 pineal gland normal 10.8858 SRR1028003 head normal 10.4158 SRR1167757 embryo mpeg1 morpholino and bacterial infection 10.402000000000001 SRR372798 28 hpf normal 10.3916 SRR1167756 embryo mpeg1 morpholino 10.2611 SRR700534 heart control morpholino 10.255 SRR372800 2 dpf normal 10.141 SRR1342218 embryo marco morpholino 9.7542 SRR1523211 embryo control morpholino 9.56493 SRR1291417 5 dpi injected marinum 9.49118 SRR1299125 caudal fin Half day time after treatment 9.46674 SRR1647681 head kidney SVCV treatment 9.45236 SRR516129 skin male and 5 month 9.34065 SRR1167762 embryo ptpn6 morpholino 9.32639 SRR749515 24 hpf eif3ha morphant 9.31683 SRR1299129 caudal fin Seven days time after treatment 9.18286 SRR630463 5 dpf normal 9.16993 SRR776507 embryo normal 9.12155 SRR535986 larvae nhsl1b mut 9.01041 SRR1167763 embryo ptpn6 morpholino and bacterial infection 8.968860000000001 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 8.84958 SRR1647679 head kidney normal 8.77335 SRR1167753 embryo bacterial infection 8.71369 SRR1188148 embryo Control PBS 0.5 hpi 8.47414 SRR516134 skin male and 5 month 8.331339999999999 SRR516126 skin male and 5 month 8.21923 SRR1167752 embryo normal 8.12782 SRR038624 embryo traf6 morpholino and bacterial infection 8.0645 SRR1188156 embryo Control PBS 4 hpi 7.9741800000000005 SRR1565809 brain normal 7.43359 SRR1565819 brain normal 7.43238 SRR776509 embryo Salmonella infected 7.3772899999999995 SRR527834 head normal 7.316269999999999 SRR801555 embryo RPS19 morpholino 7.27043 SRR1565811 brain normal 7.256310000000001 SRR1523214 embryo glut12 morpholino 6.76082 SRR1188152 embryo Insulin 0.5 hpi 6.68165 SRR527836 24hpf normal 6.67155 SRR1647682 spleen normal 6.6307 SRR1565805 brain normal 6.5858 SRR1005530 embryo RPL11 morpholino 6.55715 SRR1708346 embryo SIBPS 6.47171 SRR942764 embryo myd88-/- 6.406630000000001 SRR1342217 embryo infection with Mycobacterium marinum 6.372319999999999 ERR594417 retina normal 6.1922 SRR610740 3 dpf normal 6.1889 SRR535978 larvae normal 6.13949 SRR1048061 pineal gland dark 6.0836 SRR1565815 brain normal 6.06974 SRR1048059 pineal gland light 6.03089 SRR519747 6 dpf VD3 treatment 6.011819999999999 SRR610742 3 dpf express NICD 5.992369999999999 SRR519727 6 dpf FETOH treatment 5.89205 SRR610741 3 dpf express Ras 5.84823 SRR1342216 embryo norml 5.84232 SRR516127 skin male and 5 month 5.66384 SRR1188160 embryo Insulin 4 hpi 5.5023 SRR519732 7 dpf FETOH treatment 5.43981 SRR1565813 brain normal 5.3792 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 5.378340000000001 SRR1565807 brain normal 5.30826 SRR1299127 caudal fin Two days time after treatment 5.29708 SRR1647683 spleen SVCV treatment 5.26879 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 5.221080000000001 SRR748488 sperm normal 5.21876 SRR527844 24hpf normal 4.88246 SRR1647680 head kidney SVCV treatment 4.83821 ERR594418 retina transgenic flk1 and develop tumors 4.79312 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 4.6990099999999995 SRR1004788 larvae impdh1b morpholino 4.58573 SRR516130 skin male and 5 month 4.5625599999999995 SRR1565817 brain normal 4.539280000000001 SRR1299128 caudal fin Three days time after treatment 4.46229 SRR957180 heart 7 days after heart tip amputation 4.45602 SRR1205154 5dpf transgenic sqET20 4.414280000000001 SRR1708344 embryo MUTPS 4.19139 SRR592700 pineal gland normal 4.1287400000000005 SRR1562528 eye normal 4.06046 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 4.04455 SRR535848 larvae hoxb1b mut 4.00778 SRR891511 brain normal 3.9680400000000002 SRR519752 7 dpf VD3 treatment 3.9604800000000004 SRR535943 larvae vangl mut 3.8867599999999998 SRR535890 larvae normal 3.8218099999999997 SRR633516 larvae normal 3.25935 SRR592698 pineal gland normal 3.21893 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.21598 SRR1708345 embryo SIBAS 3.20329 SRR749514 24 hpf normal 3.19742 ERR594416 retina transgenic flk1 3.1743200000000003 SRR1005529 embryo control morpholino 3.14628 SRR801554 embryo control morpholino 3.1415599999999997 SRR519722 4 dpf FETOH treatment 3.03741 SRR1562532 spleen normal 3.03352 SRR527840 24hpf normal 3.00578 SRR776508 embryo miR-146 knockdown 3.0021299999999997 SRR831692 embryo normal 2.95178 SRR527832 16-36 hpf normal 2.88936 SRR1562531 muscle normal 2.86152 SRR1035984 13 hpf normal 2.7497599999999998 SRR1004786 larvae control morpholino 2.74016 SRR519742 4 dpf VD3 treatment 2.72198 SRR633550 larvae exposed to hypoxia stress 2.7201 SRR527835 tail normal 2.68717 SRR535849 larvae normal 2.67417 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.66403 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.65128 SRR633544 larvae exposed to cold stress 2.55174 SRR1004785 larvae normal 2.53115 SRR516135 skin male and 5 month 2.4241099999999998 SRR519717 2 dpf FETOH treatment 2.38102 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.36089 SRR726540 5 dpf normal 2.33145 SRR038626 embryo control morpholino and bacterial infection 2.25331 SRR535851 larvae normal 2.19941 SRR1039571 gastrointestinal diet 0.1 NPM 2.17509 SRR658543 6 somite Gata5 morphan 2.1541900000000003 SRR535850 larvae hoxb1b mut 2.1365 SRR594771 endothelium normal 2.0864599999999998 SRR1035978 13 hpf rx3-/- 2.02972 SRR065196 3 dpf normal 2.01157 SRR372796 bud normal 1.97888 SRR801556 embryo RPS19 and p53 morpholino 1.90543 SRR1004789 larvae impdh2 morpholino 1.8990599999999997 SRR519737 2 dpf VD3 treatment 1.8863 SRR726541 5 dpf infection with Mycobacterium marinum 1.8092700000000002 SRR038625 embryo traf6 morpholino 1.7971599999999999 SRR658547 6 somite Gata5/6 morphant 1.7186599999999999 SRR797911 embryo prdm1-/- 1.55545 SRR748489 egg normal 1.54424 SRR1039573 gastrointestinal diet 0.75 NPM 1.45492 SRR1647684 spleen SVCV treatment 1.3920700000000001 SRR658539 bud Gata5/6 morphant 1.35191 SRR535913 larvae krox mut 1.23193 SRR658545 6 somite Gata6 morphant 1.2161799999999998 SRR1562529 intestine and pancreas normal 1.20892 SRR065197 3 dpf U1C knockout 1.09464 SRR535847 larvae normal 1.05777 SRR797914 embryo pbx2/4-MO 1.03607 SRR658541 6 somite normal 1.0298399999999999 SRR957181 heart normal 1.02398 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.9799899999999999 SRR1569491 embryo normal 0.9692620000000001 SRR891510 muscle normal 0.9492079999999999 SRR594769 blood normal 0.934491 SRR1004787 larvae impdh1a morpholino 0.909903 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.8777219999999999 SRR1569495 embryo normal 0.741095 SRR726542 5 dpf infection with control 0.705782 SRR535926 larvae normal 0.6263770000000001 SRR1035239 liver transgenic mCherry control 0.619115 SRR038627 embryo control morpholino 0.609016 SRR658537 bud Gata6 morphant 0.5963689999999999 SRR797908 embryo normal 0.539979 SRR1708343 embryo MUTAS 0.461591 SRR658535 bud Gata5 morphant 0.44662399999999997 SRR535852 larvae hoxb1b mut 0.41357200000000005 SRR658533 bud normal 0.28070100000000003 SRR514028 retina control morpholino 0.20714899999999997 SRR1021215 sphere stage Mzeomesa 0.195989 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.17186500000000002 SRR1621206 embryo normal 0.130471 SRR372791 dome normal 0.10360699999999999 SRR372787 2-4 cell normal 0.099134 SRR514030 retina id2a morpholino 0.093806 SRR1021213 sphere stage normal 0.0876382 SRR372789 1K cell normal 0.0493991