sample tissue condition fpkm SRR1188156 embryo Control PBS 4 hpi 15.2587 SRR797914 embryo pbx2/4-MO 12.9017 SRR797911 embryo prdm1-/- 11.1391 SRR1167763 embryo ptpn6 morpholino and bacterial infection 10.8949 SRR797917 embryo pbx2/4-MO and prdm1-/- 10.7786 SRR797908 embryo normal 10.2405 ERR023143 swim bladder normal 9.31821 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.34456 ERR023146 head kidney normal 7.03286 SRR1291417 5 dpi injected marinum 6.99482 SRR527840 24hpf normal 6.87585 SRR1188148 embryo Control PBS 0.5 hpi 6.51863 SRR372798 28 hpf normal 6.2022900000000005 SRR594769 blood normal 6.19815 SRR372793 shield normal 5.9783599999999995 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 5.79076 SRR1708346 embryo SIBPS 5.779730000000001 SRR514028 retina control morpholino 5.61758 SRR1708345 embryo SIBAS 5.51659 SRR527836 24hpf normal 4.4513 SRR372796 bud normal 4.38893 SRR535978 larvae normal 4.322080000000001 SRR1569491 embryo normal 4.21392 SRR516133 skin male and 5 month 4.20188 SRR535890 larvae normal 4.17695 SRR1004786 larvae control morpholino 3.6826800000000004 SRR594771 endothelium normal 3.6819800000000003 SRR535913 larvae krox mut 3.6554699999999998 SRR658543 6 somite Gata5 morphan 3.4714 SRR1648855 brain normal 3.34911 SRR514030 retina id2a morpholino 3.30065 SRR700534 heart control morpholino 3.29865 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.2838300000000005 SRR1021215 sphere stage Mzeomesa 3.21645 ERR023145 heart normal 3.1221 SRR1167753 embryo bacterial infection 3.06047 SRR535986 larvae nhsl1b mut 3.00013 SRR1104059 heart kctd10 mut 2.9765099999999998 SRR1188152 embryo Insulin 0.5 hpi 2.9413099999999996 SRR1299129 caudal fin Seven days time after treatment 2.915 SRR516132 skin male and 5 month 2.7439400000000003 SRR535943 larvae vangl mut 2.73011 SRR1299128 caudal fin Three days time after treatment 2.6614 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 2.64968 SRR1004788 larvae impdh1b morpholino 2.6466 SRR372800 2 dpf normal 2.53876 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.48963 SRR516127 skin male and 5 month 2.39614 SRR535926 larvae normal 2.37465 SRR1569495 embryo normal 2.34285 SRR527844 24hpf normal 2.3111599999999997 SRR516126 skin male and 5 month 2.23912 SRR1004785 larvae normal 2.13504 SRR1299125 caudal fin Half day time after treatment 2.10459 SRR1035984 13 hpf normal 2.06003 SRR1035978 13 hpf rx3-/- 1.99185 SRR1708344 embryo MUTPS 1.9615099999999999 SRR1342217 embryo infection with Mycobacterium marinum 1.84335 SRR372791 dome normal 1.7947799999999998 SRR658541 6 somite normal 1.7200799999999998 SRR1005530 embryo RPL11 morpholino 1.6651799999999999 SRR941749 anterior pectoral fin normal 1.65687 SRR1291414 5 dpi normal 1.64825 SRR1648854 brain normal 1.64642 SRR1648856 brain normal 1.5860100000000001 SRR1299124 caudal fin Zero day time after treatment 1.57997 SRR658545 6 somite Gata6 morphant 1.57954 SRR942769 embryo myd88+/+ 1.50874 SRR700537 heart Gata4 morpholino 1.40598 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.36329 SRR1167762 embryo ptpn6 morpholino 1.36075 SRR1104058 heart normal 1.34711 SRR038625 embryo traf6 morpholino 1.19678 SRR749514 24 hpf normal 1.1863 SRR516131 skin male and 5 month 1.16899 SRR065197 3 dpf U1C knockout 1.16632 SRR527832 16-36 hpf normal 1.15446 SRR1647681 head kidney SVCV treatment 1.14945 SRR610741 3 dpf express Ras 1.1210200000000001 SRR748491 germ ring normal 1.06918 SRR516134 skin male and 5 month 1.05121 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.044 SRR1021213 sphere stage normal 1.0404 SRR658547 6 somite Gata5/6 morphant 0.978728 SRR749515 24 hpf eif3ha morphant 0.9572440000000001 SRR516125 skin male and 3.5 year 0.906272 SRR519752 7 dpf VD3 treatment 0.8966639999999999 SRR592703 pineal gland normal 0.881127 SRR658539 bud Gata5/6 morphant 0.840975 SRR1028002 head normal 0.840471 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.83178 SRR1299127 caudal fin Two days time after treatment 0.826699 SRR800046 sphere stage 5azaCyD treatment 0.811543 ERR023144 brain normal 0.7815350000000001 SRR776509 embryo Salmonella infected 0.7763909999999999 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.759946 SRR800045 muscle normal 0.758387 SRR516128 skin male and 5 month 0.745951 SRR1562528 eye normal 0.742224 SRR1562529 intestine and pancreas normal 0.741845 SRR658535 bud Gata5 morphant 0.731139 SRR038627 embryo control morpholino 0.73001 SRR610742 3 dpf express NICD 0.724301 SRR519747 6 dpf VD3 treatment 0.703339 SRR658537 bud Gata6 morphant 0.695117 SRR1188160 embryo Insulin 4 hpi 0.674565 SRR1167752 embryo normal 0.6603640000000001 SRR519737 2 dpf VD3 treatment 0.6543869999999999 SRR519717 2 dpf FETOH treatment 0.632857 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.6127779999999999 SRR942764 embryo myd88-/- 0.61183 SRR516135 skin male and 5 month 0.581141 SRR519722 4 dpf FETOH treatment 0.575344 SRR1562531 muscle normal 0.570298 SRR519727 6 dpf FETOH treatment 0.547303 SRR776508 embryo miR-146 knockdown 0.543149 SRR1647680 head kidney SVCV treatment 0.52722 ERR594418 retina transgenic flk1 and develop tumors 0.5266569999999999 SRR610740 3 dpf normal 0.487234 SRR630464 5 dpf injected epidermidis 0.473272 SRR038624 embryo traf6 morpholino and bacterial infection 0.460318 SRR592700 pineal gland normal 0.454009 SRR519732 7 dpf FETOH treatment 0.45201899999999995 SRR1039571 gastrointestinal diet 0.1 NPM 0.448455 SRR1039573 gastrointestinal diet 0.75 NPM 0.443719 SRR941753 posterior pectoral fin normal 0.42625 SRR592698 pineal gland normal 0.4203 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.42029700000000003 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.41931999999999997 SRR1647684 spleen SVCV treatment 0.417158 SRR592699 pineal gland normal 0.41672299999999995 SRR1565815 brain normal 0.41140200000000005 SRR516130 skin male and 5 month 0.40511199999999997 SRR630463 5 dpf normal 0.404492 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.384407 SRR1565813 brain normal 0.35925799999999997 SRR1565809 brain normal 0.35039000000000003 ERR594417 retina normal 0.341531 SRR1167756 embryo mpeg1 morpholino 0.33834699999999995 SRR1523211 embryo control morpholino 0.31869200000000003 SRR535848 larvae hoxb1b mut 0.298703 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.287829 ERR594416 retina transgenic flk1 0.286771 SRR519742 4 dpf VD3 treatment 0.28549 SRR726542 5 dpf infection with control 0.280321 SRR800043 sphere stage normal 0.27517600000000003 SRR527834 head normal 0.265751 SRR957181 heart normal 0.25456 SRR1205154 5dpf transgenic sqET20 0.253357 SRR1005529 embryo control morpholino 0.244837 SRR801554 embryo control morpholino 0.244468 SRR658533 bud normal 0.241695 SRR527833 5 dpf normal 0.241479 SRR726541 5 dpf infection with Mycobacterium marinum 0.23979899999999998 SRR801556 embryo RPS19 and p53 morpholino 0.23595700000000003 SRR065196 3 dpf normal 0.229638 SRR038626 embryo control morpholino and bacterial infection 0.225081 SRR1004789 larvae impdh2 morpholino 0.216795 SRR1028003 head normal 0.20083299999999998 SRR1035237 liver transgenic UHRF1 0.182232 SRR633544 larvae exposed to cold stress 0.180299 SRR1565807 brain normal 0.180162 SRR1565805 brain normal 0.17616300000000001 SRR1708343 embryo MUTAS 0.17472100000000002 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.17178 SRR1534351 larvae 500 ug/l BDE47 treatment 0.156935 SRR1523214 embryo glut12 morpholino 0.155095 SRR1647683 spleen SVCV treatment 0.15037 SRR592702 pineal gland normal 0.147359 SRR1647682 spleen normal 0.14718599999999998 SRR831692 embryo normal 0.147122 SRR372802 5 dpf normal 0.145054 SRR516124 skin male and 3.5 year 0.143965 SRR1299126 caudal fin One day time after treatment 0.13930399999999998 SRR516123 skin male and 3.5 year 0.13471 SRR1004787 larvae impdh1a morpholino 0.12118499999999999 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.105826 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.087545 SRR1565819 brain normal 0.080261 SRR1565811 brain normal 0.0788138 SRR1562533 testis normal 0.0713615 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.0643628 SRR372787 2-4 cell normal 0.05452100000000001 SRR1621206 embryo normal 0.027775499999999998 SRR1049814 256 cell normal 0.0191526