sample tissue condition fpkm SRR372787 2-4 cell normal 25.5004 SRR800043 sphere stage normal 24.9654 SRR800037 egg normal 20.0144 SRR514030 retina id2a morpholino 19.1938 SRR800049 sphere stage control treatment 18.3797 SRR372789 1K cell normal 17.875 SRR1621206 embryo normal 16.5407 SRR1049814 256 cell normal 15.1231 SRR800046 sphere stage 5azaCyD treatment 12.8201 SRR1021213 sphere stage normal 12.710999999999999 SRR748489 egg normal 12.355 SRR1569495 embryo normal 9.7052 SRR527835 tail normal 9.620389999999999 SRR1569491 embryo normal 8.36125 SRR1021215 sphere stage Mzeomesa 7.47237 SRR372791 dome normal 6.9629 SRR658547 6 somite Gata5/6 morphant 6.369190000000001 SRR801556 embryo RPS19 and p53 morpholino 5.70324 SRR1035978 13 hpf rx3-/- 5.6616599999999995 SRR658533 bud normal 5.200819999999999 SRR886457 512 cell 4-thio-UTP metabolic labeling 5.15131 SRR065197 3 dpf U1C knockout 5.1105599999999995 SRR748491 germ ring normal 5.05534 SRR749514 24 hpf normal 5.01431 SRR1035981 13 hpf rx3+/+ or rx3+/- 4.9679199999999994 SRR886455 128 cell 4-thio-UTP metabolic labeling 4.92571 SRR1035984 13 hpf normal 4.87953 SRR658535 bud Gata5 morphant 4.76856 SRR594771 endothelium normal 4.49371 SRR658541 6 somite normal 4.4305900000000005 SRR514028 retina control morpholino 4.012980000000001 SRR1004786 larvae control morpholino 3.8988099999999997 SRR658545 6 somite Gata6 morphant 3.83731 SRR1104058 heart normal 3.82557 SRR748488 sperm normal 3.5565 SRR594769 blood normal 3.44516 SRR1004785 larvae normal 3.3814800000000003 SRR886456 256 cell 4-thio-UTP metabolic labeling 3.3625199999999995 SRR372793 shield normal 3.34133 SRR749515 24 hpf eif3ha morphant 3.32675 SRR658543 6 somite Gata5 morphan 3.1949 SRR1104059 heart kctd10 mut 2.9528 SRR801554 embryo control morpholino 2.7958 SRR1005529 embryo control morpholino 2.78863 SRR700534 heart control morpholino 2.7564 SRR797914 embryo pbx2/4-MO 2.6859900000000003 SRR1005530 embryo RPL11 morpholino 2.5870599999999997 SRR1708343 embryo MUTAS 2.3614599999999997 SRR801555 embryo RPS19 morpholino 2.3075799999999997 SRR519717 2 dpf FETOH treatment 2.25583 SRR748490 1 kcell normal 2.181 SRR1035237 liver transgenic UHRF1 2.1471400000000003 SRR1647679 head kidney normal 2.10617 SRR633550 larvae exposed to hypoxia stress 2.10511 ERR023143 swim bladder normal 2.0805700000000003 SRR519737 2 dpf VD3 treatment 2.07783 SRR1299125 caudal fin Half day time after treatment 2.01792 SRR1004787 larvae impdh1a morpholino 1.9666299999999999 SRR700537 heart Gata4 morpholino 1.9601 SRR658537 bud Gata6 morphant 1.9512599999999998 SRR038624 embryo traf6 morpholino and bacterial infection 1.9203299999999999 SRR516127 skin male and 5 month 1.85843 SRR1004788 larvae impdh1b morpholino 1.83001 SRR797911 embryo prdm1-/- 1.8259 SRR726540 5 dpf normal 1.7839200000000002 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.7707 SRR776508 embryo miR-146 knockdown 1.7347299999999999 SRR633544 larvae exposed to cold stress 1.67747 SRR516130 skin male and 5 month 1.6670099999999999 ERR023146 head kidney normal 1.63632 SRR527844 24hpf normal 1.6154899999999999 SRR797908 embryo normal 1.60368 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.59646 SRR726542 5 dpf infection with control 1.54749 SRR1004789 larvae impdh2 morpholino 1.54313 SRR1523214 embryo glut12 morpholino 1.52251 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.51729 SRR658539 bud Gata5/6 morphant 1.4994100000000001 SRR516135 skin male and 5 month 1.4712399999999999 SRR535890 larvae normal 1.45536 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.45516 SRR527833 5 dpf normal 1.44137 SRR516134 skin male and 5 month 1.36554 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.3447799999999999 SRR527836 24hpf normal 1.3349799999999998 SRR535851 larvae normal 1.32354 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 1.28322 SRR516128 skin male and 5 month 1.2281799999999998 SRR1647680 head kidney SVCV treatment 1.2100899999999999 SRR891510 muscle normal 1.20108 SRR1205154 5dpf transgenic sqET20 1.18822 SRR610741 3 dpf express Ras 1.18131 ERR594418 retina transgenic flk1 and develop tumors 1.1585299999999998 SRR1647681 head kidney SVCV treatment 1.11932 SRR372798 28 hpf normal 1.10876 SRR891504 liver normal 1.09864 SRR1534351 larvae 500 ug/l BDE47 treatment 1.0930799999999998 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.08235 ERR594417 retina normal 1.07755 SRR776509 embryo Salmonella infected 1.06108 SRR941753 posterior pectoral fin normal 1.06102 SRR527832 16-36 hpf normal 1.05062 SRR1648856 brain normal 1.0504799999999999 SRR1708346 embryo SIBPS 1.04185 SRR038627 embryo control morpholino 1.03312 SRR372796 bud normal 1.01988 SRR592703 pineal gland normal 0.960706 SRR1648855 brain normal 0.951306 SRR527834 head normal 0.946326 SRR516122 skin male and 3.5 year 0.9460649999999999 SRR1048061 pineal gland dark 0.9274459999999999 SRR038626 embryo control morpholino and bacterial infection 0.927333 SRR1647684 spleen SVCV treatment 0.9100809999999999 SRR891512 blood normal 0.87208 SRR1039573 gastrointestinal diet 0.75 NPM 0.866102 SRR1299129 caudal fin Seven days time after treatment 0.860677 SRR519752 7 dpf VD3 treatment 0.854101 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.853224 SRR800045 muscle normal 0.8528209999999999 SRR1647683 spleen SVCV treatment 0.850427 SRR592698 pineal gland normal 0.850068 SRR942764 embryo myd88-/- 0.8462059999999999 SRR1188156 embryo Control PBS 4 hpi 0.83955 SRR1562533 testis normal 0.826026 SRR1188160 embryo Insulin 4 hpi 0.813667 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.806631 SRR535913 larvae krox mut 0.801962 SRR535926 larvae normal 0.801064 SRR592700 pineal gland normal 0.80006 SRR1048059 pineal gland light 0.799176 SRR633516 larvae normal 0.796814 SRR592699 pineal gland normal 0.788419 SRR1035239 liver transgenic mCherry control 0.753499 SRR1708344 embryo MUTPS 0.74153 SRR610740 3 dpf normal 0.7288220000000001 SRR1028002 head normal 0.713593 SRR519732 7 dpf FETOH treatment 0.712774 SRR610742 3 dpf express NICD 0.699105 SRR831692 embryo normal 0.6866760000000001 SRR1534349 larvae DMSO vehicle 0.667219 SRR1299126 caudal fin One day time after treatment 0.652764 SRR519727 6 dpf FETOH treatment 0.650978 SRR1647682 spleen normal 0.6381760000000001 SRR519742 4 dpf VD3 treatment 0.636035 SRR527840 24hpf normal 0.632596 SRR516125 skin male and 3.5 year 0.630213 SRR065196 3 dpf normal 0.624508 SRR519722 4 dpf FETOH treatment 0.618326 SRR1028004 head normal 0.617785 SRR1299127 caudal fin Two days time after treatment 0.587937 SRR1188148 embryo Control PBS 0.5 hpi 0.5603560000000001 SRR519747 6 dpf VD3 treatment 0.560345 SRR372800 2 dpf normal 0.55353 SRR535847 larvae normal 0.553007 SRR1534350 larvae 5 ug/l BDE47 treatment 0.550557 SRR1028003 head normal 0.541633 SRR957180 heart 7 days after heart tip amputation 0.512201 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.509363 SRR1562530 liver normal 0.500912 SRR942769 embryo myd88+/+ 0.494909 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.494821 SRR1708345 embryo SIBAS 0.49428 SRR516124 skin male and 3.5 year 0.48409300000000005 SRR1167756 embryo mpeg1 morpholino 0.44928 SRR516133 skin male and 5 month 0.44919499999999996 SRR592702 pineal gland normal 0.439827 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.436619 SRR776507 embryo normal 0.419333 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.41716899999999996 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.415835 SRR726541 5 dpf infection with Mycobacterium marinum 0.410293 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.406465 SRR516123 skin male and 3.5 year 0.405173 SRR1039571 gastrointestinal diet 0.1 NPM 0.382342 SRR535849 larvae normal 0.369687 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.365568 SRR941749 anterior pectoral fin normal 0.346529 SRR1648854 brain normal 0.342225 SRR1342216 embryo norml 0.331256 SRR1167753 embryo bacterial infection 0.316443 SRR535852 larvae hoxb1b mut 0.30246999999999996 SRR957181 heart normal 0.296781 SRR1565809 brain normal 0.293363 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.292042 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.277344 SRR038625 embryo traf6 morpholino 0.26404 SRR630464 5 dpf injected epidermidis 0.22507399999999997 SRR1565811 brain normal 0.216425 SRR1291417 5 dpi injected marinum 0.210711 SRR1342218 embryo marco morpholino 0.19334500000000002 SRR1565817 brain normal 0.18950899999999998 SRR1299124 caudal fin Zero day time after treatment 0.17811 SRR1565805 brain normal 0.17466600000000002 ERR023145 heart normal 0.172204 ERR594416 retina transgenic flk1 0.166071 SRR1167752 embryo normal 0.165252 SRR535978 larvae normal 0.15171199999999999 SRR630463 5 dpf normal 0.149546 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.145788 SRR592701 pineal gland normal 0.145543 SRR1565813 brain normal 0.132523 SRR1299128 caudal fin Three days time after treatment 0.125629 SRR1523211 embryo control morpholino 0.125331 SRR1562531 muscle normal 0.123525 SRR1167762 embryo ptpn6 morpholino 0.11725999999999999 SRR372802 5 dpf normal 0.11314400000000001 SRR1565815 brain normal 0.111079 SRR1342217 embryo infection with Mycobacterium marinum 0.09944789999999999 SRR1188152 embryo Insulin 0.5 hpi 0.0842845 SRR1562532 spleen normal 0.082642 SRR516121 skin male and 3.5 year 0.0710142 SRR1291414 5 dpi normal 0.05994730000000001 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.0381515 ERR023144 brain normal 0.0349498 SRR1565807 brain normal 0.030429599999999998 SRR516126 skin male and 5 month 0.0209579 SRR535943 larvae vangl mut 0.012774899999999999 SRR516131 skin male and 5 month 0.011208 SRR891495 heart normal 0.0028878 SRR535850 larvae hoxb1b mut 0.0008127089999999999 SRR891511 brain normal 0.000409068 SRR1565819 brain normal 0.000385425 SRR516132 skin male and 5 month 0.00033089400000000003 SRR535848 larvae hoxb1b mut 0.000298879 SRR516129 skin male and 5 month 0.000178394 SRR1562528 eye normal 3.87085e-05 SRR1562529 intestine and pancreas normal 2.11728e-05