sample tissue condition fpkm SRR886456 256 cell 4-thio-UTP metabolic labeling 34.1326 SRR886455 128 cell 4-thio-UTP metabolic labeling 34.0247 SRR886457 512 cell 4-thio-UTP metabolic labeling 25.5498 SRR514028 retina control morpholino 18.4534 SRR514030 retina id2a morpholino 16.2539 ERR023143 swim bladder normal 12.8755 SRR1569491 embryo normal 12.2634 SRR1299126 caudal fin One day time after treatment 10.9542 SRR658539 bud Gata5/6 morphant 9.925189999999999 SRR527840 24hpf normal 9.77497 SRR658533 bud normal 9.29775 SRR658547 6 somite Gata5/6 morphant 9.15347 ERR023144 brain normal 9.12974 SRR527836 24hpf normal 8.90362 SRR1299124 caudal fin Zero day time after treatment 8.73247 SRR800046 sphere stage 5azaCyD treatment 8.62616 SRR800043 sphere stage normal 8.2494 SRR658541 6 somite normal 8.21022 SRR1299129 caudal fin Seven days time after treatment 8.20589 SRR800037 egg normal 8.125060000000001 SRR800049 sphere stage control treatment 8.10763 SRR658535 bud Gata5 morphant 8.00102 SRR535978 larvae normal 7.98232 SRR1299125 caudal fin Half day time after treatment 7.87339 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 7.81265 SRR1299127 caudal fin Two days time after treatment 7.772460000000001 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 7.58467 SRR658537 bud Gata6 morphant 7.3638699999999995 SRR658545 6 somite Gata6 morphant 7.24833 SRR535986 larvae nhsl1b mut 6.998530000000001 SRR594771 endothelium normal 6.98919 SRR658543 6 somite Gata5 morphan 6.82195 SRR527835 tail normal 6.6295399999999995 SRR748490 1 kcell normal 6.62855 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 6.06302 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 6.00964 SRR516132 skin male and 5 month 5.9355400000000005 SRR1299128 caudal fin Three days time after treatment 5.851719999999999 ERR023146 head kidney normal 5.63549 SRR776507 embryo normal 5.47438 SRR527833 5 dpf normal 5.43728 SRR527832 16-36 hpf normal 5.41897 SRR776508 embryo miR-146 knockdown 5.27612 SRR516133 skin male and 5 month 5.072 SRR527844 24hpf normal 5.04977 SRR1021213 sphere stage normal 4.80234 SRR1291417 5 dpi injected marinum 4.575419999999999 SRR516121 skin male and 3.5 year 4.56501 SRR1035981 13 hpf rx3+/+ or rx3+/- 4.53144 SRR748488 sperm normal 4.503480000000001 ERR023145 heart normal 4.4871 SRR1035978 13 hpf rx3-/- 4.46475 SRR776509 embryo Salmonella infected 4.42236 SRR594769 blood normal 4.3884 SRR1523211 embryo control morpholino 4.3722900000000005 SRR038624 embryo traf6 morpholino and bacterial infection 4.34155 SRR1291414 5 dpi normal 4.26526 SRR748491 germ ring normal 4.23869 SRR776510 embryo Salmonella infected and miR-146 knockdown 4.18886 SRR1004786 larvae control morpholino 3.80435 SRR700537 heart Gata4 morpholino 3.7615 SRR516125 skin male and 3.5 year 3.72244 SRR630464 5 dpf injected epidermidis 3.71308 SRR797914 embryo pbx2/4-MO 3.68641 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 3.6722599999999996 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 3.6270800000000003 SRR1205160 5dpf transgenic sqET20 and GFP+ 3.62125 SRR516123 skin male and 3.5 year 3.6014699999999995 SRR797917 embryo pbx2/4-MO and prdm1-/- 3.59418 SRR1035237 liver transgenic UHRF1 3.5785 SRR1708345 embryo SIBAS 3.5387199999999996 SRR1167752 embryo normal 3.46041 SRR700534 heart control morpholino 3.43359 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 3.3423 SRR516129 skin male and 5 month 3.2183200000000003 SRR1005529 embryo control morpholino 3.20284 SRR801554 embryo control morpholino 3.19802 SRR942769 embryo myd88+/+ 3.1650099999999997 SRR797908 embryo normal 3.13645 SRR891512 blood normal 3.08816 SRR800045 muscle normal 3.03919 SRR1708346 embryo SIBPS 3.02811 SRR749515 24 hpf eif3ha morphant 3.01865 SRR1342218 embryo marco morpholino 2.95287 SRR630463 5 dpf normal 2.86455 SRR516128 skin male and 5 month 2.8442 SRR1167753 embryo bacterial infection 2.7690799999999998 SRR038627 embryo control morpholino 2.6875 SRR1167762 embryo ptpn6 morpholino 2.67719 SRR535890 larvae normal 2.63627 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.60328 SRR797911 embryo prdm1-/- 2.57708 SRR1342216 embryo norml 2.56675 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.55117 SRR748489 egg normal 2.53005 SRR1039573 gastrointestinal diet 0.75 NPM 2.44515 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.3881900000000003 SRR749514 24 hpf normal 2.35155 SRR1569495 embryo normal 2.3393 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.33147 SRR1708343 embryo MUTAS 2.33018 SRR1342217 embryo infection with Mycobacterium marinum 2.31032 SRR1021215 sphere stage Mzeomesa 2.29544 SRR1205154 5dpf transgenic sqET20 2.27536 SRR516131 skin male and 5 month 2.2671799999999998 SRR535913 larvae krox mut 2.26052 SRR516122 skin male and 3.5 year 2.2446599999999997 SRR1004788 larvae impdh1b morpholino 2.22353 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.22325 SRR527834 head normal 2.21195 SRR1188160 embryo Insulin 4 hpi 2.20499 SRR1004785 larvae normal 2.1965 SRR516124 skin male and 3.5 year 2.19485 SRR516127 skin male and 5 month 2.15443 SRR1708344 embryo MUTPS 2.15259 SRR610740 3 dpf normal 2.14521 SRR1647683 spleen SVCV treatment 2.12489 SRR891495 heart normal 2.08553 SRR1028004 head normal 2.04933 SRR1562533 testis normal 2.00069 SRR535943 larvae vangl mut 1.9891299999999998 SRR516126 skin male and 5 month 1.98038 SRR801555 embryo RPS19 morpholino 1.9755900000000002 SRR516130 skin male and 5 month 1.94115 SRR1647682 spleen normal 1.9280400000000002 SRR1562530 liver normal 1.9269900000000002 SRR065197 3 dpf U1C knockout 1.9216900000000001 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.88158 SRR726542 5 dpf infection with control 1.8615400000000002 SRR1562532 spleen normal 1.6947900000000002 SRR891510 muscle normal 1.67698 SRR1028002 head normal 1.63814 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.62974 SRR1562529 intestine and pancreas normal 1.62491 SRR065196 3 dpf normal 1.58112 SRR1565813 brain normal 1.5796 SRR1167756 embryo mpeg1 morpholino 1.57664 SRR1035239 liver transgenic mCherry control 1.57093 SRR1562531 muscle normal 1.56176 SRR516135 skin male and 5 month 1.55674 SRR941749 anterior pectoral fin normal 1.5499399999999999 SRR1188152 embryo Insulin 0.5 hpi 1.5251299999999999 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.52247 SRR1004787 larvae impdh1a morpholino 1.45961 SRR1188148 embryo Control PBS 0.5 hpi 1.3904299999999998 SRR1039571 gastrointestinal diet 0.1 NPM 1.3395299999999999 SRR1565817 brain normal 1.33835 SRR1035984 13 hpf normal 1.3137299999999998 SRR1005530 embryo RPL11 morpholino 1.2746899999999999 SRR1562528 eye normal 1.25451 SRR1028003 head normal 1.23515 SRR1565805 brain normal 1.2268 SRR1104059 heart kctd10 mut 1.2196799999999999 SRR942764 embryo myd88-/- 1.21441 ERR594417 retina normal 1.19038 ERR594416 retina transgenic flk1 1.1903299999999999 SRR1565819 brain normal 1.18198 SRR1565809 brain normal 1.1385399999999999 ERR594418 retina transgenic flk1 and develop tumors 1.1172 SRR801556 embryo RPS19 and p53 morpholino 1.06599 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.0596299999999998 SRR633550 larvae exposed to hypoxia stress 1.02121 SRR1565807 brain normal 1.01345 SRR1104058 heart normal 0.996517 SRR610742 3 dpf express NICD 0.9774209999999999 SRR592698 pineal gland normal 0.962664 SRR891511 brain normal 0.890288 SRR592702 pineal gland normal 0.878542 SRR1565811 brain normal 0.870784 SRR1188156 embryo Control PBS 4 hpi 0.830306 SRR592703 pineal gland normal 0.746907 SRR1647684 spleen SVCV treatment 0.722054 SRR1048059 pineal gland light 0.696229 SRR1565815 brain normal 0.6915640000000001 SRR535851 larvae normal 0.625915 SRR1534349 larvae DMSO vehicle 0.611923 SRR1048061 pineal gland dark 0.608214 SRR1004789 larvae impdh2 morpholino 0.586674 SRR1647680 head kidney SVCV treatment 0.574317 SRR1534350 larvae 5 ug/l BDE47 treatment 0.524593 SRR535926 larvae normal 0.514854 SRR535849 larvae normal 0.507 SRR1647679 head kidney normal 0.486706 SRR633544 larvae exposed to cold stress 0.466405 SRR592699 pineal gland normal 0.451371 SRR941753 posterior pectoral fin normal 0.448588 SRR1523214 embryo glut12 morpholino 0.440029 SRR519752 7 dpf VD3 treatment 0.40913 SRR535847 larvae normal 0.334642 SRR535852 larvae hoxb1b mut 0.325679 SRR633516 larvae normal 0.306107 SRR592700 pineal gland normal 0.30357 SRR519742 4 dpf VD3 treatment 0.29624 SRR831692 embryo normal 0.222372 SRR519717 2 dpf FETOH treatment 0.198328 SRR519732 7 dpf FETOH treatment 0.191032 SRR516134 skin male and 5 month 0.133026 SRR038625 embryo traf6 morpholino 0.131668 SRR519722 4 dpf FETOH treatment 0.118577 SRR519747 6 dpf VD3 treatment 0.112174 SRR535848 larvae hoxb1b mut 0.10411199999999998 SRR519727 6 dpf FETOH treatment 0.082192 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.0676158 SRR038626 embryo control morpholino and bacterial infection 0.05420740000000001 SRR519737 2 dpf VD3 treatment 0.0237148 SRR372793 shield normal 0.0220893 SRR535850 larvae hoxb1b mut 0.0188861 SRR1648856 brain normal 0.0166511 SRR957180 heart 7 days after heart tip amputation 0.014109 SRR372791 dome normal 0.0085916 SRR1049814 256 cell normal 0.00846087 SRR372802 5 dpf normal 0.00571449 SRR1621206 embryo normal 0.00469708 SRR1647681 head kidney SVCV treatment 0.00412743 SRR372789 1K cell normal 0.00244521 SRR726540 5 dpf normal 0.000527556 SRR726541 5 dpf infection with Mycobacterium marinum 0.000446116 SRR1534351 larvae 500 ug/l BDE47 treatment 0.00041135