sample tissue condition fpkm SRR372796 bud normal 20.7937 SRR1299125 caudal fin Half day time after treatment 12.6221 SRR372793 shield normal 11.2269 SRR1299126 caudal fin One day time after treatment 9.946819999999999 SRR1299127 caudal fin Two days time after treatment 9.93254 SRR658547 6 somite Gata5/6 morphant 9.72241 SRR658533 bud normal 9.65527 SRR658541 6 somite normal 8.96603 ERR023146 head kidney normal 8.81105 SRR658545 6 somite Gata6 morphant 8.178180000000001 SRR527836 24hpf normal 8.17354 SRR527840 24hpf normal 7.70989 SRR372798 28 hpf normal 7.479360000000001 SRR658539 bud Gata5/6 morphant 7.41062 SRR1648856 brain normal 7.23319 ERR023145 heart normal 7.076010000000001 SRR594771 endothelium normal 7.0572 SRR658537 bud Gata6 morphant 7.04513 SRR776510 embryo Salmonella infected and miR-146 knockdown 7.01244 SRR749515 24 hpf eif3ha morphant 6.81988 SRR516134 skin male and 5 month 6.81618 SRR514028 retina control morpholino 6.772989999999999 SRR776507 embryo normal 6.684489999999999 SRR372800 2 dpf normal 6.57075 SRR658543 6 somite Gata5 morphan 6.38858 SRR1035978 13 hpf rx3-/- 5.82355 SRR1299124 caudal fin Zero day time after treatment 5.7948900000000005 SRR1035981 13 hpf rx3+/+ or rx3+/- 5.6697 SRR658535 bud Gata5 morphant 5.66394 SRR1299128 caudal fin Three days time after treatment 5.65879 SRR1708345 embryo SIBAS 5.653 SRR594769 blood normal 5.59532 SRR749514 24 hpf normal 5.58827 SRR372791 dome normal 5.54304 SRR516133 skin male and 5 month 5.381819999999999 SRR1648854 brain normal 5.05879 SRR776509 embryo Salmonella infected 5.01423 SRR700534 heart control morpholino 4.8899300000000006 SRR1299129 caudal fin Seven days time after treatment 4.58645 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 4.537730000000001 SRR1035984 13 hpf normal 4.25461 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 4.1993599999999995 SRR514030 retina id2a morpholino 4.1052599999999995 SRR776508 embryo miR-146 knockdown 3.9416 SRR1708346 embryo SIBPS 3.93915 SRR797911 embryo prdm1-/- 3.6054699999999995 SRR1569491 embryo normal 3.49496 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.1510599999999998 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 3.0859 SRR1004786 larvae control morpholino 3.0834599999999996 SRR700537 heart Gata4 morpholino 3.06955 SRR797908 embryo normal 3.06955 SRR1708344 embryo MUTPS 3.03045 SRR527844 24hpf normal 2.97428 SRR516131 skin male and 5 month 2.94772 SRR535978 larvae normal 2.94555 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.94393 SRR1648855 brain normal 2.87426 ERR023143 swim bladder normal 2.84018 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.75314 SRR942764 embryo myd88-/- 2.67997 SRR797914 embryo pbx2/4-MO 2.66477 SRR957181 heart normal 2.63138 SRR1342218 embryo marco morpholino 2.60166 SRR516127 skin male and 5 month 2.58947 SRR516124 skin male and 3.5 year 2.48929 SRR1167756 embryo mpeg1 morpholino 2.4691099999999997 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.4685099999999998 SRR527833 5 dpf normal 2.4356400000000002 SRR1205154 5dpf transgenic sqET20 2.37568 SRR1167752 embryo normal 2.36144 SRR372802 5 dpf normal 2.32855 SRR1188148 embryo Control PBS 0.5 hpi 2.30749 SRR038627 embryo control morpholino 2.27908 SRR1004785 larvae normal 2.26683 SRR519717 2 dpf FETOH treatment 2.26438 SRR519737 2 dpf VD3 treatment 2.17866 SRR527834 head normal 2.10609 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.06873 SRR516121 skin male and 3.5 year 2.0672 SRR516126 skin male and 5 month 2.04338 SRR1104058 heart normal 2.0032900000000002 SRR1167762 embryo ptpn6 morpholino 1.99554 SRR630463 5 dpf normal 1.97853 SRR1104059 heart kctd10 mut 1.96138 SRR516125 skin male and 3.5 year 1.9587900000000003 SRR535943 larvae vangl mut 1.92039 SRR957180 heart 7 days after heart tip amputation 1.90809 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.9074799999999998 SRR1523211 embryo control morpholino 1.9005599999999998 SRR038625 embryo traf6 morpholino 1.8969 SRR1028004 head normal 1.89395 SRR1342216 embryo norml 1.86947 SRR610740 3 dpf normal 1.8427900000000002 SRR1342217 embryo infection with Mycobacterium marinum 1.79896 SRR1291414 5 dpi normal 1.797 ERR023144 brain normal 1.7733700000000001 SRR1188152 embryo Insulin 0.5 hpi 1.7664799999999998 SRR516123 skin male and 3.5 year 1.7469400000000002 SRR516122 skin male and 3.5 year 1.7300799999999998 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.66835 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.61398 SRR516130 skin male and 5 month 1.6052600000000001 SRR941749 anterior pectoral fin normal 1.5883399999999999 SRR1004788 larvae impdh1b morpholino 1.54007 SRR535890 larvae normal 1.53916 SRR1167753 embryo bacterial infection 1.53655 SRR1028002 head normal 1.5337399999999999 SRR1291417 5 dpi injected marinum 1.52904 SRR726540 5 dpf normal 1.50136 SRR519722 4 dpf FETOH treatment 1.47451 SRR519742 4 dpf VD3 treatment 1.47357 SRR1188160 embryo Insulin 4 hpi 1.473 SRR519752 7 dpf VD3 treatment 1.46363 SRR519747 6 dpf VD3 treatment 1.45634 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.4435799999999999 SRR748491 germ ring normal 1.42488 SRR1562531 muscle normal 1.41422 SRR942769 embryo myd88+/+ 1.39611 SRR1188156 embryo Control PBS 4 hpi 1.37315 SRR535926 larvae normal 1.3375700000000001 SRR1647684 spleen SVCV treatment 1.30236 SRR831692 embryo normal 1.30209 SRR1647682 spleen normal 1.27249 SRR516135 skin male and 5 month 1.25606 SRR527832 16-36 hpf normal 1.24761 SRR592701 pineal gland normal 1.24722 SRR1569495 embryo normal 1.19645 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.18236 SRR516128 skin male and 5 month 1.18234 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.1748 SRR372789 1K cell normal 1.16416 SRR038624 embryo traf6 morpholino and bacterial infection 1.1607399999999999 SRR535986 larvae nhsl1b mut 1.15278 SRR1039571 gastrointestinal diet 0.1 NPM 1.1480299999999999 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.09255 SRR592698 pineal gland normal 1.08348 SRR1647683 spleen SVCV treatment 1.08335 SRR519727 6 dpf FETOH treatment 1.02375 SRR1647680 head kidney SVCV treatment 1.01291 SRR726542 5 dpf infection with control 1.0086600000000001 SRR372787 2-4 cell normal 1.00643 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.9497680000000001 SRR065197 3 dpf U1C knockout 0.94532 SRR519732 7 dpf FETOH treatment 0.930738 SRR630464 5 dpf injected epidermidis 0.894251 SRR1028003 head normal 0.875551 SRR1565809 brain normal 0.869976 SRR516129 skin male and 5 month 0.8555360000000001 SRR1647679 head kidney normal 0.841841 SRR748489 egg normal 0.83585 SRR592702 pineal gland normal 0.825635 SRR1565811 brain normal 0.81884 SRR038626 embryo control morpholino and bacterial infection 0.810806 SRR1035237 liver transgenic UHRF1 0.789741 SRR1523214 embryo glut12 morpholino 0.742046 SRR1621206 embryo normal 0.723151 SRR1562533 testis normal 0.685597 SRR633516 larvae normal 0.674615 SRR065196 3 dpf normal 0.661778 SRR535848 larvae hoxb1b mut 0.6606989999999999 SRR1708343 embryo MUTAS 0.652766 SRR633550 larvae exposed to hypoxia stress 0.642987 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.631282 SRR633544 larvae exposed to cold stress 0.6207189999999999 SRR610741 3 dpf express Ras 0.618737 SRR891504 liver normal 0.61055 SRR941753 posterior pectoral fin normal 0.6030989999999999 SRR1021215 sphere stage Mzeomesa 0.5907819999999999 SRR800046 sphere stage 5azaCyD treatment 0.5846819999999999 SRR1021213 sphere stage normal 0.573624 SRR592700 pineal gland normal 0.567203 SRR1562529 intestine and pancreas normal 0.550565 SRR800045 muscle normal 0.546384 SRR1565813 brain normal 0.544821 SRR535913 larvae krox mut 0.538292 SRR891511 brain normal 0.538155 SRR1565805 brain normal 0.522496 SRR748488 sperm normal 0.50026 SRR535849 larvae normal 0.49903100000000006 SRR1048059 pineal gland light 0.49442299999999995 SRR1562528 eye normal 0.48122600000000004 SRR592703 pineal gland normal 0.481022 SRR1534349 larvae DMSO vehicle 0.454553 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.447353 SRR1565807 brain normal 0.443292 SRR1565817 brain normal 0.417271 SRR1534350 larvae 5 ug/l BDE47 treatment 0.408958 SRR535852 larvae hoxb1b mut 0.404661 SRR1565819 brain normal 0.355401 SRR1647681 head kidney SVCV treatment 0.354912 ERR594416 retina transgenic flk1 0.353082 SRR891512 blood normal 0.349389 SRR1004787 larvae impdh1a morpholino 0.34923699999999996 SRR891510 muscle normal 0.343051 SRR1534351 larvae 500 ug/l BDE47 treatment 0.340491 SRR1562532 spleen normal 0.339281 SRR535847 larvae normal 0.338949 SRR800043 sphere stage normal 0.324571 SRR1565815 brain normal 0.317279 SRR891495 heart normal 0.302732 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.292594 SRR535851 larvae normal 0.28694400000000003 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.279708 SRR610742 3 dpf express NICD 0.275967 ERR594418 retina transgenic flk1 and develop tumors 0.262019 SRR516132 skin male and 5 month 0.24711100000000003 SRR1004789 larvae impdh2 morpholino 0.234287 ERR594417 retina normal 0.224633 SRR1049814 256 cell normal 0.19286099999999998 SRR1035239 liver transgenic mCherry control 0.18528699999999998 SRR726541 5 dpf infection with Mycobacterium marinum 0.17260699999999998 SRR1005529 embryo control morpholino 0.169074 SRR801554 embryo control morpholino 0.16882 SRR527835 tail normal 0.15470799999999998 SRR801555 embryo RPS19 morpholino 0.14973599999999998 SRR535850 larvae hoxb1b mut 0.140818 SRR1039573 gastrointestinal diet 0.75 NPM 0.12646300000000002 SRR1048061 pineal gland dark 0.1008 SRR800037 egg normal 0.0799586 SRR592699 pineal gland normal 0.07339910000000001