sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 49.3375 SRR1205154 5dpf transgenic sqET20 45.5856 SRR776507 embryo normal 43.4637 SRR1205160 5dpf transgenic sqET20 and GFP+ 43.3785 SRR1299129 caudal fin Seven days time after treatment 41.6998 ERR023145 heart normal 40.5407 SRR630463 5 dpf normal 38.8867 SRR630464 5 dpf injected epidermidis 38.4462 SRR1299128 caudal fin Three days time after treatment 37.3621 SRR1299127 caudal fin Two days time after treatment 36.33 ERR023146 head kidney normal 35.4204 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 34.674 ERR023144 brain normal 34.0354 SRR535978 larvae normal 32.8989 SRR1299126 caudal fin One day time after treatment 32.863 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 31.421999999999997 SRR942764 embryo myd88-/- 29.5168 SRR776509 embryo Salmonella infected 29.0178 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 28.7545 SRR1342218 embryo marco morpholino 28.6634 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 28.0596 SRR776510 embryo Salmonella infected and miR-146 knockdown 28.0329 SRR535986 larvae nhsl1b mut 27.9733 SRR776508 embryo miR-146 knockdown 27.5936 SRR1167752 embryo normal 27.1307 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 26.8631 SRR942769 embryo myd88+/+ 26.816 SRR941749 anterior pectoral fin normal 26.7671 SRR1299125 caudal fin Half day time after treatment 25.7009 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 25.4763 SRR1167757 embryo mpeg1 morpholino and bacterial infection 24.592 ERR023143 swim bladder normal 24.5423 SRR514028 retina control morpholino 24.4499 SRR594771 endothelium normal 24.0535 SRR516125 skin male and 3.5 year 23.9801 ERR594417 retina normal 23.8538 SRR516133 skin male and 5 month 23.3532 SRR1342216 embryo norml 23.1436 SRR1648855 brain normal 22.5246 SRR1167756 embryo mpeg1 morpholino 22.4025 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 22.3818 SRR1291414 5 dpi normal 21.1714 SRR1167762 embryo ptpn6 morpholino 20.5851 SRR1291417 5 dpi injected marinum 20.5488 SRR516124 skin male and 3.5 year 20.285 SRR516131 skin male and 5 month 20.1856 SRR1523211 embryo control morpholino 19.7333 SRR535913 larvae krox mut 19.6309 SRR1342217 embryo infection with Mycobacterium marinum 19.3931 SRR1167753 embryo bacterial infection 19.3614 SRR516122 skin male and 3.5 year 18.8178 SRR594769 blood normal 18.5707 SRR1004788 larvae impdh1b morpholino 18.3789 SRR797914 embryo pbx2/4-MO 18.1696 SRR941753 posterior pectoral fin normal 18.1564 SRR1648854 brain normal 18.0926 SRR797917 embryo pbx2/4-MO and prdm1-/- 17.9553 SRR1523214 embryo glut12 morpholino 17.5421 SRR516129 skin male and 5 month 17.4662 SRR516126 skin male and 5 month 17.2048 SRR1188152 embryo Insulin 0.5 hpi 17.1996 SRR1028002 head normal 16.9245 SRR1188160 embryo Insulin 4 hpi 16.5974 SRR516134 skin male and 5 month 16.3996 SRR1562532 spleen normal 16.3438 SRR514030 retina id2a morpholino 15.8236 SRR516123 skin male and 3.5 year 15.6257 SRR535849 larvae normal 15.5419 SRR535847 larvae normal 15.5384 SRR535890 larvae normal 14.873 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 14.753 SRR1562531 muscle normal 14.6645 SRR516121 skin male and 3.5 year 14.6285 SRR658545 6 somite Gata6 morphant 14.6279 SRR372800 2 dpf normal 14.6062 SRR1648856 brain normal 14.5883 SRR797911 embryo prdm1-/- 14.5581 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 14.4651 ERR594416 retina transgenic flk1 14.2097 SRR592703 pineal gland normal 14.0481 SRR700537 heart Gata4 morpholino 13.9993 SRR1004786 larvae control morpholino 13.8694 SRR1167763 embryo ptpn6 morpholino and bacterial infection 13.8651 SRR1562528 eye normal 13.7783 SRR1188148 embryo Control PBS 0.5 hpi 13.748 SRR1647679 head kidney normal 13.6907 SRR1647682 spleen normal 13.6551 SRR527840 24hpf normal 13.6432 SRR527836 24hpf normal 13.5188 SRR1647683 spleen SVCV treatment 13.4926 SRR1028004 head normal 13.4721 SRR658541 6 somite normal 13.4557 SRR797908 embryo normal 13.3505 SRR516128 skin male and 5 month 13.2924 SRR831692 embryo normal 13.267000000000001 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 13.1952 SRR516132 skin male and 5 month 13.0297 SRR527844 24hpf normal 12.9413 SRR592700 pineal gland normal 12.9125 SRR535850 larvae hoxb1b mut 12.8826 SRR372798 28 hpf normal 12.8629 SRR065196 3 dpf normal 12.5281 SRR535848 larvae hoxb1b mut 12.331 SRR535851 larvae normal 12.0801 SRR610741 3 dpf express Ras 11.9753 SRR592702 pineal gland normal 11.7883 SRR535943 larvae vangl mut 11.741 SRR1647680 head kidney SVCV treatment 11.5912 SRR1562529 intestine and pancreas normal 11.5345 SRR700534 heart control morpholino 11.2692 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 11.1957 SRR535852 larvae hoxb1b mut 11.1834 SRR610740 3 dpf normal 11.0201 SRR610742 3 dpf express NICD 10.9676 SRR1028003 head normal 10.8937 SRR749514 24 hpf normal 10.7749 SRR1048059 pineal gland light 10.7665 SRR535926 larvae normal 10.6912 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 10.6185 SRR1104058 heart normal 10.5509 SRR519737 2 dpf VD3 treatment 10.4856 SRR065197 3 dpf U1C knockout 10.4614 SRR519717 2 dpf FETOH treatment 10.3737 SRR1534350 larvae 5 ug/l BDE47 treatment 10.3638 SRR516127 skin male and 5 month 10.3244 SRR1562530 liver normal 10.2798 SRR519732 7 dpf FETOH treatment 10.1208 SRR658547 6 somite Gata5/6 morphant 10.0794 SRR516135 skin male and 5 month 10.0726 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 9.95457 SRR891511 brain normal 9.723460000000001 SRR658533 bud normal 9.6602 SRR592701 pineal gland normal 9.644969999999999 SRR372802 5 dpf normal 9.35388 SRR1708345 embryo SIBAS 9.319469999999999 SRR1647684 spleen SVCV treatment 9.281369999999999 SRR1562533 testis normal 9.234869999999999 SRR516130 skin male and 5 month 9.16191 SRR592699 pineal gland normal 8.96972 SRR1104059 heart kctd10 mut 8.574489999999999 SRR658537 bud Gata6 morphant 8.52522 ERR594418 retina transgenic flk1 and develop tumors 8.44083 SRR749515 24 hpf eif3ha morphant 8.44077 SRR519747 6 dpf VD3 treatment 8.41809 SRR592698 pineal gland normal 8.38315 SRR519727 6 dpf FETOH treatment 8.36074 SRR1708343 embryo MUTAS 7.97991 SRR519752 7 dpf VD3 treatment 7.90636 SRR658543 6 somite Gata5 morphan 7.83217 SRR1534349 larvae DMSO vehicle 7.8288 SRR1647681 head kidney SVCV treatment 7.70432 SRR1708344 embryo MUTPS 7.65915 SRR527834 head normal 7.64123 SRR519722 4 dpf FETOH treatment 7.59506 SRR1048061 pineal gland dark 7.40423 SRR1708346 embryo SIBPS 6.99442 SRR527833 5 dpf normal 6.9768300000000005 SRR527832 16-36 hpf normal 6.766539999999999 SRR519742 4 dpf VD3 treatment 6.76147 SRR658535 bud Gata5 morphant 6.655310000000001 SRR1534351 larvae 500 ug/l BDE47 treatment 6.46707 SRR658539 bud Gata5/6 morphant 6.40369 SRR633516 larvae normal 6.2363599999999995 SRR633550 larvae exposed to hypoxia stress 6.21782 SRR1039571 gastrointestinal diet 0.1 NPM 6.1390400000000005 SRR1188156 embryo Control PBS 4 hpi 5.76904 SRR372796 bud normal 5.63322 SRR891510 muscle normal 5.61514 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 5.5977 SRR038626 embryo control morpholino and bacterial infection 5.21868 SRR1035239 liver transgenic mCherry control 4.70705 SRR1565811 brain normal 4.61135 SRR748491 germ ring normal 4.4021099999999995 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 4.39291 SRR1565809 brain normal 4.30544 SRR038627 embryo control morpholino 4.13774 SRR1004789 larvae impdh2 morpholino 3.92265 SRR801556 embryo RPS19 and p53 morpholino 3.9143 SRR1004785 larvae normal 3.9058800000000002 SRR726542 5 dpf infection with control 3.89203 SRR886457 512 cell 4-thio-UTP metabolic labeling 3.8414 SRR726540 5 dpf normal 3.78235 SRR1565817 brain normal 3.5587400000000002 SRR1039573 gastrointestinal diet 0.75 NPM 3.31238 SRR1569491 embryo normal 3.27162 SRR1565819 brain normal 3.26275 SRR1005530 embryo RPL11 morpholino 3.19767 SRR1021215 sphere stage Mzeomesa 3.11057 SRR891495 heart normal 3.06518 SRR726541 5 dpf infection with Mycobacterium marinum 3.00652 SRR1565815 brain normal 2.9800299999999997 SRR891504 liver normal 2.8877 SRR038624 embryo traf6 morpholino and bacterial infection 2.78725 SRR1035978 13 hpf rx3-/- 2.78515 SRR1565805 brain normal 2.78461 SRR633544 larvae exposed to cold stress 2.77429 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.62692 SRR1565813 brain normal 2.4481 SRR372793 shield normal 2.37359 SRR1565807 brain normal 2.25146 SRR038625 embryo traf6 morpholino 2.16393 SRR372791 dome normal 2.07822 SRR1035237 liver transgenic UHRF1 1.8657299999999999 SRR1005529 embryo control morpholino 1.70533 SRR801554 embryo control morpholino 1.70207 SRR957180 heart 7 days after heart tip amputation 1.56968 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.54134 SRR1569495 embryo normal 1.5111 SRR1021213 sphere stage normal 1.4702 SRR801555 embryo RPS19 morpholino 1.21688 SRR527835 tail normal 1.2017 SRR800045 muscle normal 1.20064 SRR800046 sphere stage 5azaCyD treatment 1.19191 SRR957181 heart normal 1.09781 SRR800049 sphere stage control treatment 0.9962340000000001 SRR1004787 larvae impdh1a morpholino 0.9919629999999999 SRR891512 blood normal 0.874923 SRR1035984 13 hpf normal 0.811908 SRR748488 sperm normal 0.46598100000000003 SRR800043 sphere stage normal 0.462775 SRR748489 egg normal 0.191674 SRR372787 2-4 cell normal 0.0342406