sample tissue condition fpkm SRR514028 retina control morpholino 151.562 SRR514030 retina id2a morpholino 84.2702 ERR594418 retina transgenic flk1 and develop tumors 54.4355 SRR1648855 brain normal 31.5492 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 31.0141 SRR1104058 heart normal 28.5415 SRR1648856 brain normal 28.5272 SRR1167763 embryo ptpn6 morpholino and bacterial infection 24.7556 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 22.6119 SRR1291417 5 dpi injected marinum 21.9602 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 20.2642 SRR519717 2 dpf FETOH treatment 19.8149 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 19.5513 SRR1167756 embryo mpeg1 morpholino 18.9418 SRR1205154 5dpf transgenic sqET20 18.9116 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 18.9081 SRR519737 2 dpf VD3 treatment 18.6885 SRR535986 larvae nhsl1b mut 18.2002 SRR1648854 brain normal 17.9421 SRR1167753 embryo bacterial infection 17.9193 SRR535978 larvae normal 17.7383 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 16.3888 SRR776507 embryo normal 16.2937 SRR776509 embryo Salmonella infected 16.0698 SRR1167757 embryo mpeg1 morpholino and bacterial infection 14.4667 SRR891512 blood normal 13.9111 SRR1167752 embryo normal 13.6302 SRR630464 5 dpf injected epidermidis 13.2681 SRR038626 embryo control morpholino and bacterial infection 12.6654 SRR594771 endothelium normal 12.6343 SRR1562528 eye normal 11.1291 SRR1104059 heart kctd10 mut 10.8061 SRR592703 pineal gland normal 10.6065 SRR1188156 embryo Control PBS 4 hpi 10.5848 SRR630463 5 dpf normal 10.4675 SRR372800 2 dpf normal 10.3166 SRR065196 3 dpf normal 10.2778 SRR1039571 gastrointestinal diet 0.1 NPM 10.0623 ERR594416 retina transgenic flk1 9.785680000000001 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 9.5309 SRR1534350 larvae 5 ug/l BDE47 treatment 9.3982 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 8.8865 SRR1534349 larvae DMSO vehicle 8.43527 SRR1167762 embryo ptpn6 morpholino 8.32958 SRR1028002 head normal 8.23973 SRR1005529 embryo control morpholino 7.8968300000000005 SRR801554 embryo control morpholino 7.88497 SRR610742 3 dpf express NICD 7.86572 ERR023146 head kidney normal 7.78136 SRR1534351 larvae 500 ug/l BDE47 treatment 7.731660000000001 SRR776508 embryo miR-146 knockdown 7.4398 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 7.42243 SRR831692 embryo normal 7.24976 SRR700537 heart Gata4 morpholino 7.169160000000001 SRR1291414 5 dpi normal 7.054689999999999 SRR610741 3 dpf express Ras 6.83732 SRR519747 6 dpf VD3 treatment 6.644769999999999 SRR1188148 embryo Control PBS 0.5 hpi 6.60843 SRR1188152 embryo Insulin 0.5 hpi 6.424919999999999 SRR1039573 gastrointestinal diet 0.75 NPM 6.30795 SRR519752 7 dpf VD3 treatment 6.18935 SRR1342218 embryo marco morpholino 6.12884 SRR776510 embryo Salmonella infected and miR-146 knockdown 6.119190000000001 SRR372802 5 dpf normal 6.11723 SRR700534 heart control morpholino 6.05576 ERR023143 swim bladder normal 5.90584 SRR1028003 head normal 5.85621 SRR610740 3 dpf normal 5.8513 SRR942769 embryo myd88+/+ 5.81011 SRR1028004 head normal 5.793480000000001 SRR519727 6 dpf FETOH treatment 5.79097 SRR942764 embryo myd88-/- 5.75895 SRR038624 embryo traf6 morpholino and bacterial infection 5.740480000000001 SRR519732 7 dpf FETOH treatment 5.74008 SRR065197 3 dpf U1C knockout 5.71937 SRR527833 5 dpf normal 5.6977400000000005 SRR1299125 caudal fin Half day time after treatment 5.58921 SRR1523214 embryo glut12 morpholino 5.45713 SRR1342217 embryo infection with Mycobacterium marinum 5.39353 ERR594417 retina normal 5.3046 SRR1342216 embryo norml 5.26732 SRR1188160 embryo Insulin 4 hpi 5.00266 SRR519742 4 dpf VD3 treatment 5.0016 SRR1299127 caudal fin Two days time after treatment 4.87437 ERR023145 heart normal 4.85569 SRR1562529 intestine and pancreas normal 4.78214 SRR1523211 embryo control morpholino 4.61946 SRR519722 4 dpf FETOH treatment 4.38636 SRR1299129 caudal fin Seven days time after treatment 4.33599 SRR633550 larvae exposed to hypoxia stress 4.2335 SRR594769 blood normal 4.04323 SRR633516 larvae normal 3.88406 SRR633544 larvae exposed to cold stress 3.86516 SRR516133 skin male and 5 month 3.62806 SRR726540 5 dpf normal 3.5642400000000003 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 3.53366 SRR1647684 spleen SVCV treatment 3.4325699999999997 SRR535848 larvae hoxb1b mut 3.25069 SRR1005530 embryo RPL11 morpholino 3.19565 SRR726541 5 dpf infection with Mycobacterium marinum 3.0556900000000002 SRR516121 skin male and 3.5 year 3.04343 SRR535850 larvae hoxb1b mut 2.9777099999999996 SRR535852 larvae hoxb1b mut 2.92581 SRR1299128 caudal fin Three days time after treatment 2.79528 SRR038627 embryo control morpholino 2.70055 SRR1299126 caudal fin One day time after treatment 2.67771 SRR535851 larvae normal 2.6588 SRR726542 5 dpf infection with control 2.56602 SRR535849 larvae normal 2.45254 SRR1562531 muscle normal 2.4373 SRR535847 larvae normal 2.43552 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.29251 SRR801556 embryo RPS19 and p53 morpholino 2.28039 SRR516124 skin male and 3.5 year 2.10022 SRR592698 pineal gland normal 2.0935799999999998 SRR516122 skin male and 3.5 year 2.08453 SRR038625 embryo traf6 morpholino 1.94711 SRR1647681 head kidney SVCV treatment 1.8728799999999999 SRR516123 skin male and 3.5 year 1.85064 SRR516134 skin male and 5 month 1.8319599999999998 SRR1205160 5dpf transgenic sqET20 and GFP+ 1.70547 SRR1647683 spleen SVCV treatment 1.65533 SRR800046 sphere stage 5azaCyD treatment 1.59202 SRR527832 16-36 hpf normal 1.57416 SRR891495 heart normal 1.4723 SRR516130 skin male and 5 month 1.45563 SRR516128 skin male and 5 month 1.45487 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.4500600000000001 SRR801555 embryo RPS19 morpholino 1.41665 SRR527834 head normal 1.40683 SRR1647682 spleen normal 1.3648799999999999 SRR941749 anterior pectoral fin normal 1.36032 SRR1299124 caudal fin Zero day time after treatment 1.26295 SRR1569491 embryo normal 1.2562799999999998 SRR516127 skin male and 5 month 1.2473100000000001 SRR1647679 head kidney normal 1.23953 SRR749515 24 hpf eif3ha morphant 1.23858 SRR1647680 head kidney SVCV treatment 1.15103 SRR797914 embryo pbx2/4-MO 1.00306 SRR516126 skin male and 5 month 0.955349 SRR372798 28 hpf normal 0.91206 SRR1569495 embryo normal 0.911676 SRR516129 skin male and 5 month 0.8948790000000001 SRR1035237 liver transgenic UHRF1 0.8597459999999999 SRR527836 24hpf normal 0.8287370000000001 SRR941753 posterior pectoral fin normal 0.801496 SRR516125 skin male and 3.5 year 0.796195 SRR1708344 embryo MUTPS 0.748979 SRR1004786 larvae control morpholino 0.742193 SRR957180 heart 7 days after heart tip amputation 0.702874 SRR516131 skin male and 5 month 0.675934 SRR1048059 pineal gland light 0.660157 SRR516135 skin male and 5 month 0.657587 SRR1004788 larvae impdh1b morpholino 0.655008 SRR1048061 pineal gland dark 0.642825 SRR1004787 larvae impdh1a morpholino 0.638465 SRR797911 embryo prdm1-/- 0.617161 SRR527840 24hpf normal 0.598109 SRR1004785 larvae normal 0.532621 SRR1562532 spleen normal 0.521476 SRR1708345 embryo SIBAS 0.500915 SRR891510 muscle normal 0.46912200000000004 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.46886400000000006 SRR535890 larvae normal 0.466865 ERR023144 brain normal 0.456095 SRR372793 shield normal 0.455334 SRR1708343 embryo MUTAS 0.45300100000000004 SRR535926 larvae normal 0.42293400000000003 SRR1562533 testis normal 0.408012 SRR527844 24hpf normal 0.401661 SRR1708346 embryo SIBPS 0.39724 SRR797908 embryo normal 0.375526 SRR527835 tail normal 0.372915 SRR592699 pineal gland normal 0.361165 SRR592702 pineal gland normal 0.354666 SRR749514 24 hpf normal 0.353982 SRR535913 larvae krox mut 0.342022 SRR1035239 liver transgenic mCherry control 0.338185 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.335463 SRR1004789 larvae impdh2 morpholino 0.33447 SRR592701 pineal gland normal 0.322357 SRR658543 6 somite Gata5 morphan 0.316361 SRR957181 heart normal 0.298688 SRR516132 skin male and 5 month 0.29781799999999997 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.29439499999999996 SRR535943 larvae vangl mut 0.243077 SRR658547 6 somite Gata5/6 morphant 0.204048 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.203776 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.20340999999999998 SRR1562530 liver normal 0.183725 SRR1021215 sphere stage Mzeomesa 0.179741 SRR800045 muscle normal 0.169924 SRR1035984 13 hpf normal 0.169077 SRR658545 6 somite Gata6 morphant 0.16025799999999998 SRR658537 bud Gata6 morphant 0.153522 SRR1565813 brain normal 0.150257 SRR1565815 brain normal 0.149596 SRR800049 sphere stage control treatment 0.14363299999999998 SRR1035978 13 hpf rx3-/- 0.138468 SRR748488 sperm normal 0.137746 SRR748491 germ ring normal 0.13577999999999998 SRR658541 6 somite normal 0.132719 SRR1565817 brain normal 0.11706300000000001 SRR1565809 brain normal 0.114434 SRR1565805 brain normal 0.113124 SRR891511 brain normal 0.11168 SRR372791 dome normal 0.11129700000000001 SRR891504 liver normal 0.10868299999999999 SRR592700 pineal gland normal 0.10726300000000001 SRR1565819 brain normal 0.105366 SRR658539 bud Gata5/6 morphant 0.0911515 SRR1565811 brain normal 0.088028 SRR800043 sphere stage normal 0.07419919999999999 SRR658533 bud normal 0.07192130000000001 SRR372796 bud normal 0.0672357 SRR1565807 brain normal 0.04884430000000001 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.045443199999999996 SRR658535 bud Gata5 morphant 0.0451921 SRR1021213 sphere stage normal 0.0415793 SRR372787 2-4 cell normal 0.041053 SRR748489 egg normal 0.030793200000000003 SRR372789 1K cell normal 0.014271299999999999 SRR1049814 256 cell normal 0.010496700000000001 SRR800037 egg normal 0.00906749 SRR1621206 embryo normal 0.00194187