sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 0.6961350000000001 SRR1299126 caudal fin One day time after treatment 0.5615180000000001 SRR1035239 liver transgenic mCherry control 0.505736 SRR1299128 caudal fin Three days time after treatment 0.499817 SRR1299127 caudal fin Two days time after treatment 0.44753000000000004 SRR941753 posterior pectoral fin normal 0.430205 SRR516132 skin male and 5 month 0.423559 SRR1299129 caudal fin Seven days time after treatment 0.41082399999999997 SRR516129 skin male and 5 month 0.37244099999999997 SRR516125 skin male and 3.5 year 0.37202199999999996 SRR941749 anterior pectoral fin normal 0.360539 SRR1299125 caudal fin Half day time after treatment 0.330275 SRR891504 liver normal 0.320065 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.31645500000000004 SRR516124 skin male and 3.5 year 0.29593600000000003 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.279502 SRR516131 skin male and 5 month 0.277325 SRR516134 skin male and 5 month 0.260062 SRR516123 skin male and 3.5 year 0.255017 SRR516128 skin male and 5 month 0.254304 SRR1039571 gastrointestinal diet 0.1 NPM 0.244498 SRR1562530 liver normal 0.24412199999999998 SRR516122 skin male and 3.5 year 0.243687 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.23487399999999997 SRR516121 skin male and 3.5 year 0.233985 ERR594416 retina transgenic flk1 0.229742 SRR1562529 intestine and pancreas normal 0.22390500000000002 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.20979099999999998 SRR1039573 gastrointestinal diet 0.75 NPM 0.208394 SRR516133 skin male and 5 month 0.20520700000000003 SRR516135 skin male and 5 month 0.204821 SRR1035237 liver transgenic UHRF1 0.203286 SRR797911 embryo prdm1-/- 0.200979 ERR594417 retina normal 0.199287 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.191361 SRR797908 embryo normal 0.18140599999999998 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.179334 SRR797914 embryo pbx2/4-MO 0.178204 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.170824 SRR891512 blood normal 0.170247 SRR527840 24hpf normal 0.15926700000000002 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.158626 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.15792799999999999 SRR527836 24hpf normal 0.156096 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.154899 SRR748489 egg normal 0.150781 SRR516127 skin male and 5 month 0.145515 SRR516126 skin male and 5 month 0.143977 SRR891495 heart normal 0.140121 SRR1647681 head kidney SVCV treatment 0.137069 SRR1048061 pineal gland dark 0.136324 SRR1647679 head kidney normal 0.134519 SRR527844 24hpf normal 0.127896 SRR519732 7 dpf FETOH treatment 0.12754400000000002 SRR516130 skin male and 5 month 0.121174 SRR1647680 head kidney SVCV treatment 0.11843800000000002 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.11725899999999999 SRR1291414 5 dpi normal 0.113192 SRR1562533 testis normal 0.112392 SRR592698 pineal gland normal 0.109787 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.109357 SRR1205154 5dpf transgenic sqET20 0.10856800000000001 SRR1523211 embryo control morpholino 0.10823699999999999 SRR957180 heart 7 days after heart tip amputation 0.106419 SRR535986 larvae nhsl1b mut 0.10510699999999999 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.10319400000000001 SRR1534349 larvae DMSO vehicle 0.102798 SRR610741 3 dpf express Ras 0.101688 ERR594418 retina transgenic flk1 and develop tumors 0.10035 SRR1048059 pineal gland light 0.0993026 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.0971404 SRR535978 larvae normal 0.09667610000000001 SRR1188152 embryo Insulin 0.5 hpi 0.09395089999999999 SRR1188160 embryo Insulin 4 hpi 0.0930128 SRR1291417 5 dpi injected marinum 0.09172960000000001 SRR726542 5 dpf infection with control 0.0915625 SRR1534351 larvae 500 ug/l BDE47 treatment 0.0915403 SRR1005530 embryo RPL11 morpholino 0.0914183 SRR1004789 larvae impdh2 morpholino 0.0897379 SRR514030 retina id2a morpholino 0.0894383 SRR1021213 sphere stage normal 0.0864506 SRR519737 2 dpf VD3 treatment 0.0860252 SRR519717 2 dpf FETOH treatment 0.0860179 SRR514028 retina control morpholino 0.0858953 SRR519747 6 dpf VD3 treatment 0.0849831 SRR519752 7 dpf VD3 treatment 0.0845326 SRR592703 pineal gland normal 0.0844468 SRR592700 pineal gland normal 0.0834055 SRR519742 4 dpf VD3 treatment 0.0792321 SRR726541 5 dpf infection with Mycobacterium marinum 0.0790294 SRR535849 larvae normal 0.0790129 SRR630463 5 dpf normal 0.0789553 SRR1167762 embryo ptpn6 morpholino 0.07886280000000001 SRR519727 6 dpf FETOH treatment 0.0779943 SRR630464 5 dpf injected epidermidis 0.0779823 SRR1167756 embryo mpeg1 morpholino 0.07729169999999999 SRR1004788 larvae impdh1b morpholino 0.07640110000000001 SRR519722 4 dpf FETOH treatment 0.0763568 SRR372798 28 hpf normal 0.0758791 SRR1562528 eye normal 0.07583039999999999 SRR1004786 larvae control morpholino 0.0748482 SRR372787 2-4 cell normal 0.074814 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.07438389999999999 SRR535851 larvae normal 0.07344550000000001 SRR610742 3 dpf express NICD 0.0728625 SRR065196 3 dpf normal 0.0713812 SRR1021215 sphere stage Mzeomesa 0.0694694 SRR1523214 embryo glut12 morpholino 0.0690045 SRR776507 embryo normal 0.0687589 ERR023146 head kidney normal 0.0687414 SRR1562532 spleen normal 0.0684675 SRR891511 brain normal 0.0665095 SRR038627 embryo control morpholino 0.06632139999999999 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.06594860000000001 SRR592702 pineal gland normal 0.06572130000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.06562130000000001 SRR1647683 spleen SVCV treatment 0.0654322 SRR535848 larvae hoxb1b mut 0.0654255 SRR957181 heart normal 0.0652814 SRR527835 tail normal 0.0650472 SRR1647682 spleen normal 0.0640766 SRR1167753 embryo bacterial infection 0.06399500000000001 SRR065197 3 dpf U1C knockout 0.06388619999999999 SRR535852 larvae hoxb1b mut 0.06289159999999999 SRR1342217 embryo infection with Mycobacterium marinum 0.06277569999999999 SRR1188156 embryo Control PBS 4 hpi 0.0627007 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.062185800000000006 SRR1167752 embryo normal 0.06181669999999999 SRR1534350 larvae 5 ug/l BDE47 treatment 0.061438400000000004 SRR1708345 embryo SIBAS 0.0613221 SRR1708344 embryo MUTPS 0.0604105 SRR535850 larvae hoxb1b mut 0.0598539 SRR1565809 brain normal 0.059562000000000004 SRR1188148 embryo Control PBS 0.5 hpi 0.05834109999999999 ERR023144 brain normal 0.058174699999999996 SRR372800 2 dpf normal 0.05743009999999999 ERR023145 heart normal 0.056974699999999996 SRR592701 pineal gland normal 0.0557644 SRR1004787 larvae impdh1a morpholino 0.0537741 SRR535913 larvae krox mut 0.0527712 SRR658545 6 somite Gata6 morphant 0.052073400000000006 SRR527834 head normal 0.0512919 SRR800043 sphere stage normal 0.0510986 SRR801556 embryo RPS19 and p53 morpholino 0.050993199999999995 SRR1342218 embryo marco morpholino 0.0509033 SRR535890 larvae normal 0.0503684 SRR749515 24 hpf eif3ha morphant 0.0501114 SRR1004785 larvae normal 0.0500237 SRR748491 germ ring normal 0.049899 SRR038626 embryo control morpholino and bacterial infection 0.0498524 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.0486378 SRR1565811 brain normal 0.0479218 SRR1708343 embryo MUTAS 0.0476281 SRR1708346 embryo SIBPS 0.0467811 SRR1565819 brain normal 0.046696499999999995 ERR023143 swim bladder normal 0.046508999999999995 SRR942769 embryo myd88+/+ 0.0456774 SRR1565817 brain normal 0.0449344 SRR038625 embryo traf6 morpholino 0.0448301 SRR726540 5 dpf normal 0.0444553 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.0443413 SRR535847 larvae normal 0.0443251 SRR748488 sperm normal 0.043379900000000006 SRR831692 embryo normal 0.0432616 SRR1028003 head normal 0.043100099999999995 SRR658543 6 somite Gata5 morphan 0.042992699999999995 SRR658539 bud Gata5/6 morphant 0.0427527 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.0417046 SRR1565813 brain normal 0.0416619 SRR1647684 spleen SVCV treatment 0.0415351 SRR594769 blood normal 0.0412944 SRR610740 3 dpf normal 0.0412138 SRR633516 larvae normal 0.0411912 SRR1569495 embryo normal 0.0410961 SRR776509 embryo Salmonella infected 0.0402089 SRR800037 egg normal 0.0400393 SRR372796 bud normal 0.039747199999999996 SRR1565805 brain normal 0.039722 SRR658541 6 somite normal 0.0392436 SRR700534 heart control morpholino 0.0390223 SRR1104058 heart normal 0.0382873 SRR749514 24 hpf normal 0.0381712 SRR527832 16-36 hpf normal 0.0371476 SRR1565807 brain normal 0.036805300000000006 SRR1028002 head normal 0.036468400000000005 SRR1562531 muscle normal 0.0355043 SRR1565815 brain normal 0.0355036 SRR942764 embryo myd88-/- 0.0350743 SRR658547 6 somite Gata5/6 morphant 0.0348911 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.034117400000000006 SRR700537 heart Gata4 morpholino 0.03401319999999999 SRR748490 1 kcell normal 0.0329409 SRR535926 larvae normal 0.0326921 SRR1005529 embryo control morpholino 0.0324768 SRR801554 embryo control morpholino 0.0324279 SRR633550 larvae exposed to hypoxia stress 0.032075 SRR658533 bud normal 0.0315302 SRR658537 bud Gata6 morphant 0.0311311 SRR1049814 256 cell normal 0.0301954 SRR592699 pineal gland normal 0.0296094 SRR1569491 embryo normal 0.0294086 SRR372789 1K cell normal 0.028821499999999996 SRR1104059 heart kctd10 mut 0.028364999999999998 SRR1342216 embryo norml 0.0282113 SRR658535 bud Gata5 morphant 0.027407400000000002 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.0269923 SRR535943 larvae vangl mut 0.025543299999999998 SRR038624 embryo traf6 morpholino and bacterial infection 0.025349599999999996 SRR776508 embryo miR-146 knockdown 0.0244577 SRR1028004 head normal 0.0219815 SRR372802 5 dpf normal 0.0208543 SRR800045 muscle normal 0.020569099999999996 SRR633544 larvae exposed to cold stress 0.019980200000000004 SRR372791 dome normal 0.0199655 SRR527833 5 dpf normal 0.0197658 SRR594771 endothelium normal 0.0192956 SRR1035978 13 hpf rx3-/- 0.0185571 SRR800049 sphere stage control treatment 0.0173702 SRR1621206 embryo normal 0.0172112 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.0167653 SRR801555 embryo RPS19 morpholino 0.014972899999999999 SRR891510 muscle normal 0.0143868 SRR1648854 brain normal 0.00941398 SRR1035984 13 hpf normal 0.00765223 SRR372793 shield normal 0.00559472 SRR1648856 brain normal 0.00511398