sample tissue condition fpkm SRR1035239 liver transgenic mCherry control 1940.32 SRR1035237 liver transgenic UHRF1 965.7489999999999 SRR1039573 gastrointestinal diet 0.75 NPM 879.841 SRR1039571 gastrointestinal diet 0.1 NPM 628.047 SRR891504 liver normal 555.672 SRR519752 7 dpf VD3 treatment 352.907 SRR519747 6 dpf VD3 treatment 268.248 SRR038626 embryo control morpholino and bacterial infection 206.425 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 187.426 SRR519732 7 dpf FETOH treatment 173.635 SRR038624 embryo traf6 morpholino and bacterial infection 154.783 SRR519727 6 dpf FETOH treatment 102.145 SRR065197 3 dpf U1C knockout 89.8478 SRR1534351 larvae 500 ug/l BDE47 treatment 79.2872 SRR1647682 spleen normal 74.0032 SRR519742 4 dpf VD3 treatment 72.7846 SRR1647680 head kidney SVCV treatment 66.7909 SRR594769 blood normal 60.3679 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 60.0837 SRR1647683 spleen SVCV treatment 54.7592 SRR1534349 larvae DMSO vehicle 49.1686 SRR610741 3 dpf express Ras 47.8564 SRR594771 endothelium normal 46.6475 SRR1562530 liver normal 44.8057 SRR1004789 larvae impdh2 morpholino 42.9687 SRR891510 muscle normal 39.8236 SRR891512 blood normal 39.3063 SRR1647684 spleen SVCV treatment 38.812 SRR519722 4 dpf FETOH treatment 37.1816 SRR1104059 heart kctd10 mut 36.0175 SRR519737 2 dpf VD3 treatment 30.4493 SRR1647679 head kidney normal 30.3742 SRR519717 2 dpf FETOH treatment 29.4294 SRR1534350 larvae 5 ug/l BDE47 treatment 28.2715 SRR700537 heart Gata4 morpholino 27.9177 SRR1188148 embryo Control PBS 0.5 hpi 26.3512 SRR726542 5 dpf infection with control 26.1252 SRR726541 5 dpf infection with Mycobacterium marinum 25.4067 SRR1647681 head kidney SVCV treatment 24.4492 SRR1004787 larvae impdh1a morpholino 24.1963 SRR1188156 embryo Control PBS 4 hpi 21.654 SRR633544 larvae exposed to cold stress 19.0884 SRR535849 larvae normal 18.6902 SRR1104058 heart normal 18.4893 ERR594418 retina transgenic flk1 and develop tumors 18.4626 ERR594416 retina transgenic flk1 18.2697 SRR535847 larvae normal 16.5043 SRR535852 larvae hoxb1b mut 15.987 SRR700534 heart control morpholino 15.0527 SRR610742 3 dpf express NICD 15.0199 SRR1569491 embryo normal 14.5809 SRR1188152 embryo Insulin 0.5 hpi 14.4003 SRR941753 posterior pectoral fin normal 14.3141 SRR516130 skin male and 5 month 13.9264 SRR776509 embryo Salmonella infected 13.4054 SRR535851 larvae normal 13.3583 SRR527834 head normal 13.3177 SRR535850 larvae hoxb1b mut 13.0505 SRR535848 larvae hoxb1b mut 12.7194 SRR1569495 embryo normal 12.5737 SRR1188160 embryo Insulin 4 hpi 11.8464 SRR726540 5 dpf normal 10.1014 SRR516132 skin male and 5 month 9.88804 SRR1004785 larvae normal 8.685260000000001 SRR1291414 5 dpi normal 8.5215 SRR038625 embryo traf6 morpholino 8.51197 SRR1291417 5 dpi injected marinum 8.280380000000001 SRR1523214 embryo glut12 morpholino 8.06606 SRR1562532 spleen normal 8.02094 SRR633550 larvae exposed to hypoxia stress 7.81469 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.43515 SRR610740 3 dpf normal 7.027989999999999 SRR527832 16-36 hpf normal 6.87922 SRR633516 larvae normal 6.869389999999999 SRR065196 3 dpf normal 6.83745 SRR038627 embryo control morpholino 6.56566 SRR776510 embryo Salmonella infected and miR-146 knockdown 6.4057 SRR1004786 larvae control morpholino 5.7965800000000005 SRR941749 anterior pectoral fin normal 5.55262 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 5.3462 SRR891511 brain normal 4.66443 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 4.49005 SRR891495 heart normal 4.4162099999999995 SRR527833 5 dpf normal 4.34162 SRR658543 6 somite Gata5 morphan 4.31025 SRR516129 skin male and 5 month 4.244669999999999 SRR1004788 larvae impdh1b morpholino 4.2124 SRR516127 skin male and 5 month 3.6909 SRR831692 embryo normal 3.6715800000000005 SRR1028003 head normal 3.4973400000000003 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.4607900000000003 SRR1523211 embryo control morpholino 3.45833 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.32692 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 3.22168 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.02683 SRR797908 embryo normal 2.95634 SRR516128 skin male and 5 month 2.89026 SRR535926 larvae normal 2.81825 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.81208 SRR516121 skin male and 3.5 year 2.74392 SRR658535 bud Gata5 morphant 2.65512 SRR516135 skin male and 5 month 2.61605 SRR801556 embryo RPS19 and p53 morpholino 2.5510200000000003 SRR527835 tail normal 2.48254 SRR1035978 13 hpf rx3-/- 2.40044 SRR535890 larvae normal 2.39701 SRR527836 24hpf normal 2.38115 SRR527840 24hpf normal 2.381 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2.37167 SRR658539 bud Gata5/6 morphant 2.34579 SRR1048061 pineal gland dark 2.31583 SRR797914 embryo pbx2/4-MO 2.1781 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.1455599999999997 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.13846 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.00601 SRR658537 bud Gata6 morphant 1.98544 SRR592703 pineal gland normal 1.9716599999999997 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.95607 SRR1562528 eye normal 1.77532 SRR800045 muscle normal 1.7566400000000002 SRR749514 24 hpf normal 1.75052 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.70415 SRR1035984 13 hpf normal 1.6059700000000001 SRR776508 embryo miR-146 knockdown 1.6039700000000001 SRR797911 embryo prdm1-/- 1.47238 SRR1708343 embryo MUTAS 1.46811 SRR535913 larvae krox mut 1.39481 SRR535943 larvae vangl mut 1.31128 SRR592699 pineal gland normal 1.19934 SRR1565813 brain normal 1.17852 SRR1205154 5dpf transgenic sqET20 1.10205 SRR658533 bud normal 1.08502 SRR527844 24hpf normal 1.03214 SRR749515 24 hpf eif3ha morphant 1.02769 SRR1562531 muscle normal 0.986885 SRR1565809 brain normal 0.959835 SRR658547 6 somite Gata5/6 morphant 0.931709 SRR1021215 sphere stage Mzeomesa 0.8322 SRR592698 pineal gland normal 0.812086 SRR1565807 brain normal 0.797725 SRR658545 6 somite Gata6 morphant 0.7781520000000001 SRR1167762 embryo ptpn6 morpholino 0.75966 SRR800046 sphere stage 5azaCyD treatment 0.668691 SRR1648855 brain normal 0.662845 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.6320979999999999 SRR1048059 pineal gland light 0.575145 SRR372793 shield normal 0.558293 SRR1565811 brain normal 0.49999099999999996 SRR592701 pineal gland normal 0.49870299999999995 SRR658541 6 somite normal 0.485095 SRR1167752 embryo normal 0.46585699999999997 SRR1167753 embryo bacterial infection 0.429046 SRR1565815 brain normal 0.408837 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.405084 SRR1565805 brain normal 0.373911 SRR748491 germ ring normal 0.366912 SRR1565817 brain normal 0.36246799999999996 SRR372802 5 dpf normal 0.281058 SRR800043 sphere stage normal 0.219335 SRR372798 28 hpf normal 0.20469 SRR1299126 caudal fin One day time after treatment 0.180343 SRR1299125 caudal fin Half day time after treatment 0.177021 SRR1648854 brain normal 0.173679 SRR1708346 embryo SIBPS 0.171977 SRR372796 bud normal 0.0637883 SRR748489 egg normal 0.06340069999999999 SRR630464 5 dpf injected epidermidis 0.061770500000000006 SRR592702 pineal gland normal 0.0466475 SRR372787 2-4 cell normal 0.0455278 SRR748490 1 kcell normal 0.030583299999999997 SRR1049814 256 cell normal 0.020276699999999998 SRR1565819 brain normal 0.019660499999999997 SRR372789 1K cell normal 0.016919099999999996 SRR800037 egg normal 0.0132661 SRR1021213 sphere stage normal 0.0111935 SRR1708345 embryo SIBAS 0.00373087 SRR1562529 intestine and pancreas normal 0.00222606 SRR776507 embryo normal 0.00135992 SRR1708344 embryo MUTPS 0.000772927 SRR516134 skin male and 5 month 0.000494615 SRR514030 retina id2a morpholino 0.000474415 SRR748488 sperm normal 0.00034774400000000004 ERR594417 retina normal 0.00011243200000000001 SRR1562533 testis normal 9.75972e-05