sample tissue condition fpkm SRR1039571 gastrointestinal diet 0.1 NPM 28.0246 SRR1562529 intestine and pancreas normal 22.8948 SRR1039573 gastrointestinal diet 0.75 NPM 22.6633 SRR1035239 liver transgenic mCherry control 20.9215 SRR1299125 caudal fin Half day time after treatment 18.4526 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 17.6711 SRR891504 liver normal 17.6275 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 17.2964 SRR1299127 caudal fin Two days time after treatment 17.123 SRR516133 skin male and 5 month 16.4973 SRR1299128 caudal fin Three days time after treatment 16.0382 SRR1167753 embryo bacterial infection 15.6251 SRR1299129 caudal fin Seven days time after treatment 15.2336 SRR1299124 caudal fin Zero day time after treatment 15.1032 SRR516123 skin male and 3.5 year 14.9817 SRR1205160 5dpf transgenic sqET20 and GFP+ 14.5333 SRR516126 skin male and 5 month 14.4846 SRR527840 24hpf normal 14.2864 SRR527836 24hpf normal 13.9855 SRR942769 embryo myd88+/+ 13.9414 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 13.9086 SRR1299126 caudal fin One day time after treatment 13.8745 SRR1167763 embryo ptpn6 morpholino and bacterial infection 13.6495 SRR1291417 5 dpi injected marinum 13.6458 SRR516124 skin male and 3.5 year 13.380999999999998 ERR594416 retina transgenic flk1 13.2908 SRR1035237 liver transgenic UHRF1 13.1238 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 13.0544 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 13.0158 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 12.9956 SRR1342217 embryo infection with Mycobacterium marinum 12.9757 ERR023146 head kidney normal 12.7813 SRR1167757 embryo mpeg1 morpholino and bacterial infection 12.5898 SRR630464 5 dpf injected epidermidis 12.5786 SRR516125 skin male and 3.5 year 12.5625 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 12.3857 SRR527834 head normal 12.0947 SRR516121 skin male and 3.5 year 12.0317 SRR1167752 embryo normal 11.9703 SRR797908 embryo normal 11.949000000000002 SRR1562528 eye normal 11.5982 SRR516127 skin male and 5 month 11.5942 SRR1342218 embryo marco morpholino 11.5843 ERR594417 retina normal 11.5111 SRR942764 embryo myd88-/- 11.5009 SRR700534 heart control morpholino 11.4692 SRR630463 5 dpf normal 11.4571 SRR1188148 embryo Control PBS 0.5 hpi 11.3055 SRR516128 skin male and 5 month 11.1292 SRR797911 embryo prdm1-/- 11.0215 SRR1188156 embryo Control PBS 4 hpi 10.9213 SRR1167756 embryo mpeg1 morpholino 10.8629 SRR535943 larvae vangl mut 10.8582 SRR797914 embryo pbx2/4-MO 10.8268 SRR658543 6 somite Gata5 morphan 10.7246 SRR797917 embryo pbx2/4-MO and prdm1-/- 10.6835 SRR516134 skin male and 5 month 10.5989 SRR1167762 embryo ptpn6 morpholino 10.467 SRR1562530 liver normal 10.4124 SRR1647683 spleen SVCV treatment 10.3979 ERR023143 swim bladder normal 10.3532 SRR519732 7 dpf FETOH treatment 10.3523 SRR516122 skin male and 3.5 year 10.3295 SRR519727 6 dpf FETOH treatment 10.2694 SRR1647680 head kidney SVCV treatment 10.2371 SRR658541 6 somite normal 10.115 SRR519752 7 dpf VD3 treatment 10.0931 SRR516131 skin male and 5 month 9.99111 SRR1188152 embryo Insulin 0.5 hpi 9.97748 SRR1291414 5 dpi normal 9.97152 SRR1523214 embryo glut12 morpholino 9.95558 SRR516129 skin male and 5 month 9.9499 SRR658533 bud normal 9.798169999999999 SRR1523211 embryo control morpholino 9.74757 SRR658535 bud Gata5 morphant 9.733839999999999 SRR1342216 embryo norml 9.69869 SRR516132 skin male and 5 month 9.64643 SRR519747 6 dpf VD3 treatment 9.59263 SRR1028004 head normal 9.4969 SRR941749 anterior pectoral fin normal 9.44236 ERR023144 brain normal 9.4117 SRR658545 6 somite Gata6 morphant 9.304210000000001 SRR1188160 embryo Insulin 4 hpi 9.18565 SRR594769 blood normal 9.17275 SRR1708346 embryo SIBPS 9.123 SRR519722 4 dpf FETOH treatment 9.10776 SRR527833 5 dpf normal 9.05521 SRR535926 larvae normal 8.93591 SRR535890 larvae normal 8.75267 SRR1028002 head normal 8.59644 SRR610742 3 dpf express NICD 8.59388 SRR516135 skin male and 5 month 8.56788 SRR519742 4 dpf VD3 treatment 8.52394 SRR749515 24 hpf eif3ha morphant 8.428469999999999 SRR610740 3 dpf normal 8.40809 SRR516130 skin male and 5 month 8.40714 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 8.34788 SRR535913 larvae krox mut 8.28814 SRR535848 larvae hoxb1b mut 8.2801 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 8.25314 SRR1534351 larvae 500 ug/l BDE47 treatment 8.23886 SRR726540 5 dpf normal 8.238719999999999 SRR610741 3 dpf express Ras 8.14402 SRR535850 larvae hoxb1b mut 8.10775 SRR1647682 spleen normal 8.06669 SRR592698 pineal gland normal 8.040980000000001 SRR941753 posterior pectoral fin normal 8.02802 SRR535852 larvae hoxb1b mut 7.99277 SRR1708344 embryo MUTPS 7.91765 SRR1534350 larvae 5 ug/l BDE47 treatment 7.91087 SRR527844 24hpf normal 7.782030000000001 SRR535851 larvae normal 7.73243 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 7.647060000000001 SRR1647684 spleen SVCV treatment 7.6321 SRR535849 larvae normal 7.604260000000001 SRR1534349 larvae DMSO vehicle 7.600219999999999 SRR658537 bud Gata6 morphant 7.4419 SRR1647679 head kidney normal 7.419860000000001 SRR1205154 5dpf transgenic sqET20 7.37955 SRR633550 larvae exposed to hypoxia stress 7.327039999999999 SRR535847 larvae normal 7.32065 SRR700537 heart Gata4 morpholino 7.20913 SRR1104059 heart kctd10 mut 7.19853 SRR633516 larvae normal 7.18173 SRR1035981 13 hpf rx3+/+ or rx3+/- 7.146439999999999 SRR1647681 head kidney SVCV treatment 7.131239999999999 SRR831692 embryo normal 7.08053 SRR1035978 13 hpf rx3-/- 6.89463 SRR633544 larvae exposed to cold stress 6.87103 SRR658539 bud Gata5/6 morphant 6.639419999999999 SRR1028003 head normal 6.55237 SRR658547 6 somite Gata5/6 morphant 6.5031300000000005 SRR726542 5 dpf infection with control 6.46735 SRR535978 larvae normal 6.3646400000000005 ERR594418 retina transgenic flk1 and develop tumors 6.2241 SRR726541 5 dpf infection with Mycobacterium marinum 6.11091 SRR1035984 13 hpf normal 5.986269999999999 SRR749514 24 hpf normal 5.97374 SRR038627 embryo control morpholino 5.96627 SRR038624 embryo traf6 morpholino and bacterial infection 5.88291 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 5.8733 SRR776510 embryo Salmonella infected and miR-146 knockdown 5.85133 SRR592699 pineal gland normal 5.78251 SRR038626 embryo control morpholino and bacterial infection 5.77116 SRR1562532 spleen normal 5.76081 SRR1708345 embryo SIBAS 5.737419999999999 SRR592703 pineal gland normal 5.65381 SRR592702 pineal gland normal 5.4932 SRR776507 embryo normal 5.488569999999999 SRR527832 16-36 hpf normal 5.4884900000000005 SRR1004788 larvae impdh1b morpholino 5.47282 SRR776509 embryo Salmonella infected 5.43733 SRR1004786 larvae control morpholino 5.43104 SRR1104058 heart normal 5.38865 SRR519717 2 dpf FETOH treatment 5.37844 SRR592700 pineal gland normal 5.3429199999999994 SRR1565805 brain normal 5.28266 SRR519737 2 dpf VD3 treatment 5.24381 SRR535986 larvae nhsl1b mut 5.22445 SRR038625 embryo traf6 morpholino 5.15906 SRR1565807 brain normal 5.15674 SRR1565819 brain normal 5.14887 SRR592701 pineal gland normal 5.0934800000000005 SRR594771 endothelium normal 4.98198 SRR1565811 brain normal 4.8846300000000005 SRR1565809 brain normal 4.88416 SRR776508 embryo miR-146 knockdown 4.87542 SRR1565817 brain normal 4.874619999999999 SRR1004789 larvae impdh2 morpholino 4.84649 SRR065196 3 dpf normal 4.830019999999999 SRR1708343 embryo MUTAS 4.76296 SRR1565815 brain normal 4.73396 SRR1004787 larvae impdh1a morpholino 4.63174 SRR891511 brain normal 4.52229 SRR1565813 brain normal 4.3129800000000005 SRR1004785 larvae normal 4.285819999999999 SRR065197 3 dpf U1C knockout 4.135280000000001 ERR023145 heart normal 4.0433 SRR1048061 pineal gland dark 3.9866099999999998 SRR891512 blood normal 3.6994300000000004 SRR1005529 embryo control morpholino 3.6573800000000003 SRR801554 embryo control morpholino 3.6518699999999997 SRR527835 tail normal 3.4756 SRR1048059 pineal gland light 3.4268300000000003 SRR891510 muscle normal 3.3715900000000003 SRR1569495 embryo normal 3.19219 SRR1569491 embryo normal 3.1720900000000003 SRR1562531 muscle normal 2.71938 SRR514028 retina control morpholino 2.5987400000000003 SRR801556 embryo RPS19 and p53 morpholino 2.54081 SRR801555 embryo RPS19 morpholino 2.24227 SRR1005530 embryo RPL11 morpholino 2.1499200000000003 SRR891495 heart normal 2.06474 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.55677 SRR514030 retina id2a morpholino 1.50844 SRR1562533 testis normal 1.4585 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.41783 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.1978600000000001 SRR748489 egg normal 1.12048 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.07254 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.925665 SRR800045 muscle normal 0.546899 SRR748488 sperm normal 0.455855 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.43245 SRR1021213 sphere stage normal 0.419991 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.270237 SRR1021215 sphere stage Mzeomesa 0.190081 SRR748491 germ ring normal 0.144905 SRR748490 1 kcell normal 0.104474 SRR800049 sphere stage control treatment 0.10273900000000001 SRR800037 egg normal 0.0940154 SRR800046 sphere stage 5azaCyD treatment 0.032512900000000004 SRR800043 sphere stage normal 0.025017700000000004 SRR1648856 brain normal 0.00508092 SRR1648855 brain normal 0.00439659 SRR372800 2 dpf normal 0.00390554 SRR372798 28 hpf normal 0.00340208