sample tissue condition fpkm SRR1708346 embryo SIBPS 47.5258 SRR1708344 embryo MUTPS 44.3544 SRR1708345 embryo SIBAS 42.7838 SRR801555 embryo RPS19 morpholino 40.1648 SRR519717 2 dpf FETOH treatment 38.77 SRR519737 2 dpf VD3 treatment 37.8323 SRR519742 4 dpf VD3 treatment 34.7295 SRR519722 4 dpf FETOH treatment 32.5312 SRR519727 6 dpf FETOH treatment 32.2214 SRR1708343 embryo MUTAS 30.4392 SRR514028 retina control morpholino 30.4312 SRR519732 7 dpf FETOH treatment 30.0875 SRR514030 retina id2a morpholino 28.9007 SRR519747 6 dpf VD3 treatment 25.3777 SRR1005530 embryo RPL11 morpholino 24.82 SRR519752 7 dpf VD3 treatment 23.305999999999997 SRR535978 larvae normal 22.3665 SRR776508 embryo miR-146 knockdown 22.3569 SRR535986 larvae nhsl1b mut 21.8553 SRR1005529 embryo control morpholino 21.6012 SRR801554 embryo control morpholino 21.5687 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 20.3365 SRR1167752 embryo normal 20.2675 SRR1028002 head normal 19.7646 SRR592698 pineal gland normal 19.6404 SRR610740 3 dpf normal 19.3633 SRR1104058 heart normal 19.0291 SRR776507 embryo normal 18.9665 SRR1167756 embryo mpeg1 morpholino 18.8017 SRR942769 embryo myd88+/+ 18.6959 SRR592700 pineal gland normal 18.5795 SRR1104059 heart kctd10 mut 18.3727 SRR801556 embryo RPS19 and p53 morpholino 18.192999999999998 SRR1342218 embryo marco morpholino 18.0418 SRR1028003 head normal 17.8215 SRR1291414 5 dpi normal 17.7263 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 17.6723 SRR630463 5 dpf normal 17.3864 SRR1167757 embryo mpeg1 morpholino and bacterial infection 17.2213 SRR1167753 embryo bacterial infection 16.6197 SRR630464 5 dpf injected epidermidis 16.0663 SRR1167762 embryo ptpn6 morpholino 15.8496 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 15.8184 SRR776510 embryo Salmonella infected and miR-146 knockdown 15.724 SRR1342216 embryo norml 15.5128 SRR592702 pineal gland normal 15.2854 SRR942764 embryo myd88-/- 15.1993 SRR1167763 embryo ptpn6 morpholino and bacterial infection 14.7135 SRR1028004 head normal 13.5101 SRR592701 pineal gland normal 13.2263 SRR610741 3 dpf express Ras 13.0791 SRR592699 pineal gland normal 12.7225 SRR776509 embryo Salmonella infected 12.6637 SRR1048061 pineal gland dark 12.4772 SRR592703 pineal gland normal 11.5992 SRR1188148 embryo Control PBS 0.5 hpi 11.4152 SRR610742 3 dpf express NICD 11.2843 SRR1342217 embryo infection with Mycobacterium marinum 10.9957 SRR1291417 5 dpi injected marinum 10.3994 SRR1048059 pineal gland light 10.1051 SRR1004785 larvae normal 9.72547 SRR065196 3 dpf normal 9.59708 SRR1188152 embryo Insulin 0.5 hpi 9.38744 SRR941749 anterior pectoral fin normal 8.83789 SRR1299124 caudal fin Zero day time after treatment 8.45645 SRR1004787 larvae impdh1a morpholino 7.87829 SRR1188160 embryo Insulin 4 hpi 7.57452 SRR038627 embryo control morpholino 7.500939999999999 SRR527833 5 dpf normal 7.49138 SRR1188156 embryo Control PBS 4 hpi 7.47193 SRR1523214 embryo glut12 morpholino 7.447430000000001 SRR038625 embryo traf6 morpholino 6.90527 SRR527836 24hpf normal 6.8701300000000005 SRR831692 embryo normal 6.66293 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 6.661989999999999 SRR038626 embryo control morpholino and bacterial infection 6.58241 SRR527832 16-36 hpf normal 5.96914 SRR516131 skin male and 5 month 5.92875 SRR1299129 caudal fin Seven days time after treatment 5.82731 SRR516129 skin male and 5 month 5.76561 SRR516132 skin male and 5 month 5.69309 SRR1523211 embryo control morpholino 5.5914 SRR633550 larvae exposed to hypoxia stress 5.58582 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 5.5557 SRR726542 5 dpf infection with control 5.35567 SRR038624 embryo traf6 morpholino and bacterial infection 5.32106 SRR1004786 larvae control morpholino 5.23151 SRR1004788 larvae impdh1b morpholino 5.2095199999999995 SRR527834 head normal 5.0936699999999995 SRR516126 skin male and 5 month 4.98491 SRR726540 5 dpf normal 4.93286 SRR633544 larvae exposed to cold stress 4.833019999999999 SRR633516 larvae normal 4.816330000000001 SRR535943 larvae vangl mut 4.3746599999999995 SRR1562528 eye normal 4.30181 SRR527840 24hpf normal 4.12294 SRR516122 skin male and 3.5 year 3.87095 SRR527844 24hpf normal 3.8215800000000004 SRR516123 skin male and 3.5 year 3.80643 SRR535926 larvae normal 3.7104800000000004 SRR065197 3 dpf U1C knockout 3.45695 SRR941753 posterior pectoral fin normal 3.33606 SRR749515 24 hpf eif3ha morphant 3.23656 SRR516125 skin male and 3.5 year 3.16371 SRR516121 skin male and 3.5 year 2.99683 SRR1569495 embryo normal 2.98968 SRR516124 skin male and 3.5 year 2.98697 SRR535913 larvae krox mut 2.9633599999999998 ERR594417 retina normal 2.84058 SRR516133 skin male and 5 month 2.81374 ERR023146 head kidney normal 2.76225 SRR1569491 embryo normal 2.72607 SRR516135 skin male and 5 month 2.6028700000000002 SRR516128 skin male and 5 month 2.53526 SRR516134 skin male and 5 month 2.52724 SRR535848 larvae hoxb1b mut 2.52629 SRR1299126 caudal fin One day time after treatment 2.52123 SRR516127 skin male and 5 month 2.44628 SRR535850 larvae hoxb1b mut 2.3424 SRR594771 endothelium normal 2.3062 SRR535890 larvae normal 2.2450799999999997 SRR1299125 caudal fin Half day time after treatment 2.1231299999999997 SRR749514 24 hpf normal 2.01954 SRR1205154 5dpf transgenic sqET20 2.00733 SRR726541 5 dpf infection with Mycobacterium marinum 1.98491 SRR535847 larvae normal 1.9228599999999998 SRR535849 larvae normal 1.88968 SRR1534351 larvae 500 ug/l BDE47 treatment 1.88115 SRR700537 heart Gata4 morpholino 1.7470900000000003 SRR516130 skin male and 5 month 1.6410200000000001 SRR535851 larvae normal 1.63917 SRR1534349 larvae DMSO vehicle 1.6324100000000001 ERR594416 retina transgenic flk1 1.59917 SRR535852 larvae hoxb1b mut 1.57924 SRR1004789 larvae impdh2 morpholino 1.5421799999999999 SRR1534350 larvae 5 ug/l BDE47 treatment 1.48222 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.42395 SRR1565811 brain normal 1.32756 SRR1299128 caudal fin Three days time after treatment 1.31792 SRR891512 blood normal 1.27989 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.19204 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.12045 SRR1299127 caudal fin Two days time after treatment 1.0995 SRR700534 heart control morpholino 1.09302 SRR1562531 muscle normal 1.07389 SRR1565807 brain normal 1.00316 SRR1565809 brain normal 0.9392290000000001 SRR1565817 brain normal 0.877925 SRR1565805 brain normal 0.8456450000000001 SRR1565813 brain normal 0.806133 SRR1565815 brain normal 0.805475 ERR594418 retina transgenic flk1 and develop tumors 0.800304 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.794705 SRR1565819 brain normal 0.708669 SRR1562532 spleen normal 0.555026 ERR023145 heart normal 0.524881 ERR023144 brain normal 0.524783 SRR891511 brain normal 0.5074380000000001 SRR800045 muscle normal 0.449568 SRR527835 tail normal 0.381883 SRR594769 blood normal 0.368899 SRR891510 muscle normal 0.30592800000000003 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.287982 SRR1647682 spleen normal 0.261753 ERR023143 swim bladder normal 0.258293 SRR1039573 gastrointestinal diet 0.75 NPM 0.240971 SRR1039571 gastrointestinal diet 0.1 NPM 0.22052 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.202254 SRR891504 liver normal 0.187904 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.185542 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.183083 SRR1035237 liver transgenic UHRF1 0.180592 SRR1647680 head kidney SVCV treatment 0.173629 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.173405 SRR1647684 spleen SVCV treatment 0.16485999999999998 SRR797908 embryo normal 0.153435 SRR658539 bud Gata5/6 morphant 0.13902 SRR1562533 testis normal 0.136766 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.132154 SRR1647681 head kidney SVCV treatment 0.12978900000000002 SRR1647683 spleen SVCV treatment 0.118852 SRR797911 embryo prdm1-/- 0.11760999999999999 SRR1647679 head kidney normal 0.11544600000000001 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.11506199999999998 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.10928299999999999 SRR658543 6 somite Gata5 morphan 0.10599000000000001 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.101096 SRR658533 bud normal 0.09780660000000001 SRR658535 bud Gata5 morphant 0.0965943 SRR658547 6 somite Gata5/6 morphant 0.0903816 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.07767660000000001 SRR658541 6 somite normal 0.07421810000000001 SRR797914 embryo pbx2/4-MO 0.0711305 SRR748488 sperm normal 0.0551562 SRR658545 6 somite Gata6 morphant 0.053269399999999995 SRR1035239 liver transgenic mCherry control 0.0508185 SRR957181 heart normal 0.048814300000000005 SRR957180 heart 7 days after heart tip amputation 0.042847500000000004 SRR1648854 brain normal 0.0420569 SRR1648856 brain normal 0.0381798 SRR748491 germ ring normal 0.0298305 SRR1035978 13 hpf rx3-/- 0.0272671 SRR1035984 13 hpf normal 0.0271373 SRR372800 2 dpf normal 0.025619 SRR372791 dome normal 0.020980099999999998 SRR1021215 sphere stage Mzeomesa 0.013059200000000002 SRR658537 bud Gata6 morphant 0.012895600000000002 SRR1021213 sphere stage normal 0.00801229