sample tissue condition fpkm SRR514030 retina id2a morpholino 17.9652 SRR514028 retina control morpholino 14.5683 SRR594771 endothelium normal 13.4444 SRR1562530 liver normal 8.09169 ERR023144 brain normal 6.49364 SRR749514 24 hpf normal 5.7865400000000005 SRR797911 embryo prdm1-/- 5.31111 SRR749515 24 hpf eif3ha morphant 5.12734 SRR797917 embryo pbx2/4-MO and prdm1-/- 4.87821 SRR797908 embryo normal 4.8493699999999995 SRR797914 embryo pbx2/4-MO 4.760280000000001 SRR535890 larvae normal 4.642580000000001 ERR023146 head kidney normal 4.40523 SRR535913 larvae krox mut 4.37437 SRR1205154 5dpf transgenic sqET20 4.07046 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.8950099999999996 ERR594417 retina normal 3.8066800000000005 SRR726540 5 dpf normal 3.66281 SRR535943 larvae vangl mut 3.55847 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 3.41828 SRR1104059 heart kctd10 mut 3.2990800000000005 SRR831692 embryo normal 3.27546 SRR1104058 heart normal 3.2675400000000003 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.24795 SRR1035984 13 hpf normal 3.24471 SRR633516 larvae normal 3.16223 SRR1569495 embryo normal 3.15983 ERR594416 retina transgenic flk1 3.15772 SRR1708345 embryo SIBAS 3.0076099999999997 SRR535852 larvae hoxb1b mut 2.93391 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.82879 SRR1708343 embryo MUTAS 2.80227 SRR535926 larvae normal 2.77317 SRR065196 3 dpf normal 2.72398 SRR1035978 13 hpf rx3-/- 2.71677 SRR535851 larvae normal 2.69077 ERR594418 retina transgenic flk1 and develop tumors 2.68424 SRR633550 larvae exposed to hypoxia stress 2.58799 SRR535847 larvae normal 2.51067 SRR535849 larvae normal 2.47465 SRR633544 larvae exposed to cold stress 2.4119900000000003 SRR065197 3 dpf U1C knockout 2.34472 SRR519737 2 dpf VD3 treatment 2.27462 SRR1534349 larvae DMSO vehicle 2.17918 SRR535848 larvae hoxb1b mut 2.17777 SRR519717 2 dpf FETOH treatment 2.1417200000000003 SRR726541 5 dpf infection with Mycobacterium marinum 1.92851 SRR610742 3 dpf express NICD 1.9130599999999998 SRR658541 6 somite normal 1.9116 SRR1534350 larvae 5 ug/l BDE47 treatment 1.78266 SRR610740 3 dpf normal 1.77213 SRR726542 5 dpf infection with control 1.76719 SRR1004788 larvae impdh1b morpholino 1.74022 SRR535850 larvae hoxb1b mut 1.7283099999999998 SRR1188156 embryo Control PBS 4 hpi 1.72085 SRR658543 6 somite Gata5 morphan 1.68042 SRR1035239 liver transgenic mCherry control 1.57188 SRR1565815 brain normal 1.55512 SRR700537 heart Gata4 morpholino 1.5474299999999999 SRR519727 6 dpf FETOH treatment 1.54336 SRR519732 7 dpf FETOH treatment 1.53759 SRR1562528 eye normal 1.50647 SRR519747 6 dpf VD3 treatment 1.48708 SRR1004786 larvae control morpholino 1.46346 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.4539799999999998 SRR610741 3 dpf express Ras 1.41832 SRR519722 4 dpf FETOH treatment 1.4128399999999999 SRR1565809 brain normal 1.41206 SRR1004789 larvae impdh2 morpholino 1.37161 SRR658545 6 somite Gata6 morphant 1.35199 SRR1004785 larvae normal 1.29518 SRR1004787 larvae impdh1a morpholino 1.25124 SRR1565805 brain normal 1.2249299999999999 SRR658537 bud Gata6 morphant 1.21872 SRR891504 liver normal 1.2101899999999999 SRR519752 7 dpf VD3 treatment 1.2006299999999999 SRR630464 5 dpf injected epidermidis 1.18668 SRR1028002 head normal 1.16927 SRR1562529 intestine and pancreas normal 1.15924 SRR519742 4 dpf VD3 treatment 1.11109 SRR1708346 embryo SIBPS 1.1002299999999998 SRR1565811 brain normal 1.0912899999999999 SRR592703 pineal gland normal 1.06461 SRR1167752 embryo normal 0.99813 SRR1534351 larvae 500 ug/l BDE47 treatment 0.953324 SRR1039571 gastrointestinal diet 0.1 NPM 0.9395540000000001 SRR1167756 embryo mpeg1 morpholino 0.9199870000000001 SRR1565807 brain normal 0.913926 SRR1565813 brain normal 0.9047700000000001 SRR594769 blood normal 0.886867 SRR1342217 embryo infection with Mycobacterium marinum 0.8839110000000001 SRR1028003 head normal 0.875999 SRR1028004 head normal 0.8679379999999999 SRR592700 pineal gland normal 0.8661610000000001 SRR1565817 brain normal 0.8517610000000001 SRR1562532 spleen normal 0.823528 SRR658535 bud Gata5 morphant 0.802508 ERR023143 swim bladder normal 0.798834 SRR1562533 testis normal 0.786489 SRR527844 24hpf normal 0.785827 SRR630463 5 dpf normal 0.785788 SRR1708344 embryo MUTPS 0.735796 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.715811 SRR1565819 brain normal 0.7151270000000001 SRR1005529 embryo control morpholino 0.7144550000000001 SRR801554 embryo control morpholino 0.713381 SRR1167753 embryo bacterial infection 0.697438 SRR748491 germ ring normal 0.680512 SRR658533 bud normal 0.675894 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.6743359999999999 SRR592701 pineal gland normal 0.638699 SRR942769 embryo myd88+/+ 0.637814 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.625188 SRR801556 embryo RPS19 and p53 morpholino 0.618011 SRR592698 pineal gland normal 0.603413 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.566132 SRR1005530 embryo RPL11 morpholino 0.565217 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.550715 SRR800046 sphere stage 5azaCyD treatment 0.550467 SRR1342218 embryo marco morpholino 0.5502819999999999 SRR1188148 embryo Control PBS 0.5 hpi 0.542791 SRR658539 bud Gata5/6 morphant 0.537782 SRR658547 6 somite Gata5/6 morphant 0.521799 SRR1291417 5 dpi injected marinum 0.477233 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.42860600000000004 SRR942764 embryo myd88-/- 0.425933 SRR700534 heart control morpholino 0.39719899999999997 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.396144 SRR527835 tail normal 0.388413 SRR801555 embryo RPS19 morpholino 0.38246399999999997 SRR800043 sphere stage normal 0.36489099999999997 SRR1035237 liver transgenic UHRF1 0.363333 SRR1188152 embryo Insulin 0.5 hpi 0.354883 SRR1048061 pineal gland dark 0.343621 ERR023145 heart normal 0.343599 SRR1021215 sphere stage Mzeomesa 0.33000300000000005 SRR527833 5 dpf normal 0.32802600000000004 SRR592702 pineal gland normal 0.31502399999999997 SRR800049 sphere stage control treatment 0.290304 SRR1188160 embryo Insulin 4 hpi 0.28797 SRR527836 24hpf normal 0.249131 SRR1039573 gastrointestinal diet 0.75 NPM 0.241563 SRR527840 24hpf normal 0.214575 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.19892 SRR800037 egg normal 0.18493800000000002 SRR776509 embryo Salmonella infected 0.182503 SRR1167762 embryo ptpn6 morpholino 0.178836 SRR527832 16-36 hpf normal 0.174015 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.15633 SRR1021213 sphere stage normal 0.153604 SRR1048059 pineal gland light 0.130529 SRR748489 egg normal 0.12807000000000002 SRR038625 embryo traf6 morpholino 0.10823499999999998 SRR038624 embryo traf6 morpholino and bacterial infection 0.104077 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.103279 SRR535986 larvae nhsl1b mut 0.100242 SRR1523214 embryo glut12 morpholino 0.0995003 SRR748490 1 kcell normal 0.093615 SRR592699 pineal gland normal 0.09022000000000001 SRR516129 skin male and 5 month 0.0767109 SRR1647681 head kidney SVCV treatment 0.0742534 SRR748488 sperm normal 0.07037460000000001 SRR527834 head normal 0.0665789 SRR1647684 spleen SVCV treatment 0.0628788 SRR1569491 embryo normal 0.0618351 SRR776508 embryo miR-146 knockdown 0.06003680000000001 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.05869069999999999 SRR957181 heart normal 0.0563832 SRR891511 brain normal 0.0492019 SRR1647682 spleen normal 0.0368745 SRR1647679 head kidney normal 0.0365927 SRR535978 larvae normal 0.0292653