sample tissue condition fpkm SRR1569491 embryo normal 9.92753 SRR1534350 larvae 5 ug/l BDE47 treatment 7.6969 SRR1021213 sphere stage normal 7.232660000000001 SRR1534349 larvae DMSO vehicle 7.13696 SRR1562533 testis normal 6.8531 SRR1534351 larvae 500 ug/l BDE47 treatment 6.45338 SRR1004788 larvae impdh1b morpholino 5.81363 SRR1205154 5dpf transgenic sqET20 5.69637 SRR594769 blood normal 5.45731 SRR630463 5 dpf normal 5.348 SRR886457 512 cell 4-thio-UTP metabolic labeling 5.31356 SRR514028 retina control morpholino 4.98749 SRR748491 germ ring normal 4.7313 SRR630464 5 dpf injected epidermidis 4.71689 SRR1167753 embryo bacterial infection 4.68372 SRR1708343 embryo MUTAS 4.67229 SRR1708345 embryo SIBAS 4.61187 SRR1291417 5 dpi injected marinum 4.60043 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 4.59251 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 4.572080000000001 SRR776509 embryo Salmonella infected 4.51195 SRR1004786 larvae control morpholino 4.43243 SRR1167752 embryo normal 4.19682 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 4.09304 ERR594418 retina transgenic flk1 and develop tumors 4.08309 SRR1005529 embryo control morpholino 4.05023 SRR801554 embryo control morpholino 4.04415 SRR527836 24hpf normal 4.02859 SRR1004785 larvae normal 3.95345 SRR1167756 embryo mpeg1 morpholino 3.9311199999999995 SRR1028002 head normal 3.87083 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.83911 SRR776510 embryo Salmonella infected and miR-146 knockdown 3.83026 ERR594417 retina normal 3.8055800000000004 SRR1028004 head normal 3.7911300000000003 SRR610741 3 dpf express Ras 3.63266 SRR535978 larvae normal 3.6326 SRR1523214 embryo glut12 morpholino 3.5953 ERR023144 brain normal 3.5598300000000003 SRR776507 embryo normal 3.5582599999999998 SRR1004787 larvae impdh1a morpholino 3.52538 SRR1342218 embryo marco morpholino 3.52167 SRR1523211 embryo control morpholino 3.5133900000000002 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.49189 SRR658533 bud normal 3.4583199999999996 SRR527844 24hpf normal 3.44311 SRR1565813 brain normal 3.4384900000000003 SRR1342217 embryo infection with Mycobacterium marinum 3.4212800000000003 SRR1342216 embryo norml 3.38185 SRR527840 24hpf normal 3.3671599999999997 SRR1205160 5dpf transgenic sqET20 and GFP+ 3.3510800000000005 SRR1708344 embryo MUTPS 3.31085 SRR1569495 embryo normal 3.29092 SRR1291414 5 dpi normal 3.25855 SRR1104058 heart normal 3.25179 SRR1299124 caudal fin Zero day time after treatment 3.23829 SRR1565819 brain normal 3.1882900000000003 SRR942764 embryo myd88-/- 3.15476 SRR1562531 muscle normal 3.13701 SRR658539 bud Gata5/6 morphant 3.11672 SRR658535 bud Gata5 morphant 3.1137 SRR658547 6 somite Gata5/6 morphant 3.11098 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.0996799999999998 SRR1565807 brain normal 3.09287 SRR776508 embryo miR-146 knockdown 3.0861400000000003 SRR1104059 heart kctd10 mut 3.06548 SRR1188160 embryo Insulin 4 hpi 3.03162 SRR1299128 caudal fin Three days time after treatment 3.0301299999999998 SRR1004789 larvae impdh2 morpholino 3.0232 SRR1565815 brain normal 3.02155 SRR1565805 brain normal 2.9997 SRR1299129 caudal fin Seven days time after treatment 2.9988799999999998 SRR1188156 embryo Control PBS 4 hpi 2.98552 SRR1565809 brain normal 2.9605 SRR610740 3 dpf normal 2.95352 ERR023143 swim bladder normal 2.9403 SRR1565817 brain normal 2.93673 SRR942769 embryo myd88+/+ 2.92217 SRR1188148 embryo Control PBS 0.5 hpi 2.90968 SRR1562532 spleen normal 2.9008599999999998 SRR610742 3 dpf express NICD 2.8658200000000003 SRR658543 6 somite Gata5 morphan 2.85921 SRR1188152 embryo Insulin 0.5 hpi 2.85445 SRR658545 6 somite Gata6 morphant 2.84733 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.83295 SRR700537 heart Gata4 morpholino 2.7238700000000002 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.72326 SRR519737 2 dpf VD3 treatment 2.72007 SRR535986 larvae nhsl1b mut 2.71287 SRR658541 6 somite normal 2.68528 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.6789 SRR1565811 brain normal 2.6783799999999998 SRR1028003 head normal 2.67329 SRR1299127 caudal fin Two days time after treatment 2.66625 SRR065196 3 dpf normal 2.65936 SRR519717 2 dpf FETOH treatment 2.6522900000000003 SRR797914 embryo pbx2/4-MO 2.60235 SRR592699 pineal gland normal 2.5867299999999998 SRR514030 retina id2a morpholino 2.5861 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2.56005 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.53737 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.53138 SRR1299126 caudal fin One day time after treatment 2.52196 SRR633516 larvae normal 2.51074 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.50846 SRR700534 heart control morpholino 2.5034099999999997 SRR1167762 embryo ptpn6 morpholino 2.4803 SRR594771 endothelium normal 2.47674 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.46607 ERR023145 heart normal 2.44964 SRR1562528 eye normal 2.43226 SRR1708346 embryo SIBPS 2.432 SRR519732 7 dpf FETOH treatment 2.43078 SRR065197 3 dpf U1C knockout 2.42901 SRR1647682 spleen normal 2.4273 ERR023146 head kidney normal 2.42726 SRR516125 skin male and 3.5 year 2.3928599999999998 SRR592702 pineal gland normal 2.39065 SRR801556 embryo RPS19 and p53 morpholino 2.37095 SRR1021215 sphere stage Mzeomesa 2.3641900000000002 SRR797911 embryo prdm1-/- 2.35534 SRR516122 skin male and 3.5 year 2.35481 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.35032 SRR891511 brain normal 2.3425700000000003 SRR516123 skin male and 3.5 year 2.3371 ERR594416 retina transgenic flk1 2.31664 SRR797908 embryo normal 2.31354 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.29267 SRR633550 larvae exposed to hypoxia stress 2.28578 SRR658537 bud Gata6 morphant 2.23428 SRR519747 6 dpf VD3 treatment 2.18012 SRR519727 6 dpf FETOH treatment 2.14792 SRR519722 4 dpf FETOH treatment 2.1391299999999998 SRR726540 5 dpf normal 2.13845 SRR038624 embryo traf6 morpholino and bacterial infection 2.11225 SRR516127 skin male and 5 month 2.10692 SRR516121 skin male and 3.5 year 2.09885 SRR535849 larvae normal 2.0899 SRR516126 skin male and 5 month 2.07249 SRR749515 24 hpf eif3ha morphant 2.04318 SRR891495 heart normal 1.99322 SRR519752 7 dpf VD3 treatment 1.98616 SRR519742 4 dpf VD3 treatment 1.9829900000000003 SRR1647684 spleen SVCV treatment 1.93163 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.9304299999999999 SRR1562530 liver normal 1.92472 SRR535851 larvae normal 1.9225700000000001 SRR749514 24 hpf normal 1.90162 SRR831692 embryo normal 1.89894 SRR1299125 caudal fin Half day time after treatment 1.89592 SRR535847 larvae normal 1.8897700000000002 SRR800043 sphere stage normal 1.8662 SRR592698 pineal gland normal 1.86012 SRR800049 sphere stage control treatment 1.8159599999999998 SRR1562529 intestine and pancreas normal 1.7972 SRR516124 skin male and 3.5 year 1.7755299999999998 SRR516131 skin male and 5 month 1.7582099999999998 SRR941749 anterior pectoral fin normal 1.73753 SRR801555 embryo RPS19 morpholino 1.7296900000000002 SRR038625 embryo traf6 morpholino 1.7099099999999998 SRR038626 embryo control morpholino and bacterial infection 1.68642 SRR535850 larvae hoxb1b mut 1.68045 SRR592703 pineal gland normal 1.67918 SRR726541 5 dpf infection with Mycobacterium marinum 1.6735900000000001 SRR592700 pineal gland normal 1.6711200000000002 SRR1048059 pineal gland light 1.6651200000000002 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.6067799999999999 SRR633544 larvae exposed to cold stress 1.5886200000000001 SRR1005530 embryo RPL11 morpholino 1.5645799999999999 SRR1048061 pineal gland dark 1.55477 SRR1647683 spleen SVCV treatment 1.5196399999999999 SRR535848 larvae hoxb1b mut 1.50568 SRR1035978 13 hpf rx3-/- 1.49689 SRR038627 embryo control morpholino 1.4946 SRR535913 larvae krox mut 1.49075 SRR592701 pineal gland normal 1.48573 SRR1039571 gastrointestinal diet 0.1 NPM 1.4763 SRR941753 posterior pectoral fin normal 1.47609 SRR748488 sperm normal 1.44844 SRR800046 sphere stage 5azaCyD treatment 1.44456 SRR535852 larvae hoxb1b mut 1.43666 SRR527832 16-36 hpf normal 1.4299 SRR535943 larvae vangl mut 1.39751 SRR535890 larvae normal 1.3973 SRR891512 blood normal 1.3839299999999999 SRR516129 skin male and 5 month 1.3673600000000001 SRR527834 head normal 1.3391600000000001 SRR726542 5 dpf infection with control 1.33894 SRR1647679 head kidney normal 1.33206 SRR516135 skin male and 5 month 1.31565 SRR535926 larvae normal 1.30845 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.26781 SRR516133 skin male and 5 month 1.20129 SRR527833 5 dpf normal 1.18859 SRR1035237 liver transgenic UHRF1 1.17069 SRR1647680 head kidney SVCV treatment 1.16574 SRR516134 skin male and 5 month 1.13196 SRR516132 skin male and 5 month 1.11986 SRR516128 skin male and 5 month 1.10494 SRR800045 muscle normal 1.0901100000000001 SRR891510 muscle normal 1.06732 SRR1035239 liver transgenic mCherry control 1.05711 SRR1035984 13 hpf normal 0.991258 SRR1647681 head kidney SVCV treatment 0.9247200000000001 SRR516130 skin male and 5 month 0.8977620000000001 SRR1039573 gastrointestinal diet 0.75 NPM 0.8688629999999999 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.767275 SRR891504 liver normal 0.407283 SRR527835 tail normal 0.389327 SRR748490 1 kcell normal 0.298147 SRR800037 egg normal 0.230202 SRR748489 egg normal 0.0935313 SRR372791 dome normal 0.0235132 SRR372796 bud normal 0.015108100000000001 SRR372798 28 hpf normal 0.00633536 SRR1621206 embryo normal 0.00254561