sample tissue condition fpkm SRR1299126 caudal fin One day time after treatment 2.87669 SRR372802 5 dpf normal 2.80936 SRR1648854 brain normal 2.79263 SRR1648856 brain normal 2.6371 SRR1299125 caudal fin Half day time after treatment 2.35832 SRR516134 skin male and 5 month 1.97757 SRR1167756 embryo mpeg1 morpholino 1.9357099999999998 SRR516127 skin male and 5 month 1.7033200000000002 SRR516122 skin male and 3.5 year 1.63477 SRR516121 skin male and 3.5 year 1.58004 SRR1028002 head normal 1.34483 ERR023146 head kidney normal 1.31408 SRR372800 2 dpf normal 1.24126 SRR516123 skin male and 3.5 year 1.12789 SRR1299127 caudal fin Two days time after treatment 1.10402 SRR1167752 embryo normal 1.03744 SRR1708343 embryo MUTAS 0.944519 SRR372798 28 hpf normal 0.9398299999999999 SRR1648855 brain normal 0.8612139999999999 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.860561 SRR1299128 caudal fin Three days time after treatment 0.819088 ERR023143 swim bladder normal 0.769988 SRR1299129 caudal fin Seven days time after treatment 0.765486 SRR372796 bud normal 0.666289 SRR1342216 embryo norml 0.620815 SRR1028004 head normal 0.617442 SRR516128 skin male and 5 month 0.593775 SRR1188160 embryo Insulin 4 hpi 0.548164 SRR594771 endothelium normal 0.547602 SRR1039571 gastrointestinal diet 0.1 NPM 0.51766 SRR592698 pineal gland normal 0.49860600000000005 SRR748488 sperm normal 0.49796599999999996 SRR1005530 embryo RPL11 morpholino 0.49524700000000005 SRR1039573 gastrointestinal diet 0.75 NPM 0.494062 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.464697 SRR516133 skin male and 5 month 0.43234300000000003 SRR535978 larvae normal 0.42755699999999996 SRR801555 embryo RPS19 morpholino 0.422225 SRR592702 pineal gland normal 0.420047 SRR776507 embryo normal 0.41731999999999997 SRR592701 pineal gland normal 0.399337 SRR1005529 embryo control morpholino 0.38691 SRR801554 embryo control morpholino 0.385326 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.32753499999999997 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.313668 SRR516129 skin male and 5 month 0.309998 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.30462 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.292451 SRR516125 skin male and 3.5 year 0.276404 SRR535943 larvae vangl mut 0.24724400000000002 SRR1565809 brain normal 0.24605100000000002 SRR372791 dome normal 0.24104499999999998 SRR527836 24hpf normal 0.228694 SRR700534 heart control morpholino 0.228287 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.22349000000000002 SRR527840 24hpf normal 0.212142 SRR1048061 pineal gland dark 0.212071 SRR1569495 embryo normal 0.208911 SRR1569491 embryo normal 0.20791300000000001 SRR1004785 larvae normal 0.205438 SRR1565811 brain normal 0.204239 SRR1291414 5 dpi normal 0.193957 SRR372793 shield normal 0.185273 SRR630463 5 dpf normal 0.172179 SRR1523214 embryo glut12 morpholino 0.17192000000000002 SRR941753 posterior pectoral fin normal 0.168491 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.167272 SRR1205154 5dpf transgenic sqET20 0.15116500000000002 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.149369 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.147109 SRR594769 blood normal 0.13630499999999998 SRR1565819 brain normal 0.124954 ERR023145 heart normal 0.12334400000000001 SRR372787 2-4 cell normal 0.120733 SRR1021215 sphere stage Mzeomesa 0.120655 SRR630464 5 dpf injected epidermidis 0.11743699999999999 SRR1049814 256 cell normal 0.105502 SRR514030 retina id2a morpholino 0.10378599999999999 SRR658547 6 somite Gata5/6 morphant 0.101385 SRR1708346 embryo SIBPS 0.0997887 SRR797914 embryo pbx2/4-MO 0.0922747 SRR1167753 embryo bacterial infection 0.0893679 SRR1565813 brain normal 0.0880515 SRR941749 anterior pectoral fin normal 0.08497610000000001 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.0832895 ERR594416 retina transgenic flk1 0.0730243 SRR1565817 brain normal 0.0696691 SRR1565807 brain normal 0.069117 SRR1291417 5 dpi injected marinum 0.053092499999999994 SRR700537 heart Gata4 morpholino 0.0470221 SRR519752 7 dpf VD3 treatment 0.046549 SRR372789 1K cell normal 0.0323582 SRR1621206 embryo normal 0.028853399999999998 SRR519747 6 dpf VD3 treatment 0.0223069 SRR519727 6 dpf FETOH treatment 0.0123618 SRR519732 7 dpf FETOH treatment 0.0123105 SRR519722 4 dpf FETOH treatment 0.010556999999999999 SRR658541 6 somite normal 0.00124356 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.000646317 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.000631116 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.000602267 SRR776508 embryo miR-146 knockdown 0.000318001 SRR776509 embryo Salmonella infected 0.000307465 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.000307217 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.000259016 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.000249355 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.00022977 SRR891495 heart normal 0.000212022 SRR1035237 liver transgenic UHRF1 0.000205537 SRR891510 muscle normal 0.00019957 SRR891512 blood normal 0.000197775 SRR1035239 liver transgenic mCherry control 0.000189583 SRR800043 sphere stage normal 0.00018165599999999998 ERR023144 brain normal 0.000179758 SRR891511 brain normal 0.00016470900000000003 SRR800046 sphere stage 5azaCyD treatment 0.000161593 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.000159984 SRR1342217 embryo infection with Mycobacterium marinum 0.000156928 SRR1342218 embryo marco morpholino 0.000155819 SRR1188148 embryo Control PBS 0.5 hpi 0.000155747 SRR1188152 embryo Insulin 0.5 hpi 0.000149682 SRR592699 pineal gland normal 0.000149139 SRR800037 egg normal 0.00014660700000000001 SRR1188156 embryo Control PBS 4 hpi 0.000142934 SRR800045 muscle normal 0.00014194200000000002 SRR891504 liver normal 0.000141503 SRR592700 pineal gland normal 0.000140905 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.000140475 ERR594418 retina transgenic flk1 and develop tumors 0.000137964 SRR592703 pineal gland normal 0.00013431 SRR1167762 embryo ptpn6 morpholino 0.000134144 SRR1048059 pineal gland light 0.00013218 ERR594417 retina normal 0.000122868 SRR726542 5 dpf infection with control 0.00011977899999999999 SRR038627 embryo control morpholino 0.000117345 SRR1523211 embryo control morpholino 0.000116794 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.000114189 SRR516131 skin male and 5 month 0.00011077299999999999 SRR726540 5 dpf normal 0.00011049700000000001 SRR038624 embryo traf6 morpholino and bacterial infection 0.00010813600000000001 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.000105826 SRR942764 embryo myd88-/- 0.000102787 SRR1562533 testis normal 0.000101511 SRR831692 embryo normal 9.937280000000001e-05 SRR633516 larvae normal 9.89062e-05 SRR516126 skin male and 5 month 9.64724e-05 SRR1708345 embryo SIBAS 9.538850000000001e-05 SRR535849 larvae normal 9.267659999999999e-05 SRR633544 larvae exposed to cold stress 9.247469999999999e-05 SRR942769 embryo myd88+/+ 9.16752e-05 SRR1708344 embryo MUTPS 9.04658e-05 SRR535851 larvae normal 9.03975e-05 SRR535852 larvae hoxb1b mut 9.01539e-05 SRR535848 larvae hoxb1b mut 9.007979999999999e-05 SRR1562532 spleen normal 8.92585e-05 SRR801556 embryo RPS19 and p53 morpholino 8.911030000000001e-05 SRR1562528 eye normal 8.90116e-05 SRR535850 larvae hoxb1b mut 8.86836e-05 SRR610740 3 dpf normal 8.77486e-05 SRR633550 larvae exposed to hypoxia stress 8.645489999999999e-05 SRR610741 3 dpf express Ras 8.6453e-05 SRR610742 3 dpf express NICD 8.63937e-05 SRR535926 larvae normal 8.58659e-05 SRR535913 larvae krox mut 8.551290000000001e-05 SRR1562531 muscle normal 8.421120000000001e-05 SRR516135 skin male and 5 month 8.36023e-05 SRR535890 larvae normal 8.307719999999999e-05 SRR726541 5 dpf infection with Mycobacterium marinum 8.27033e-05 SRR535847 larvae normal 7.751640000000001e-05 SRR516124 skin male and 3.5 year 7.65617e-05 SRR800049 sphere stage control treatment 7.64413e-05 SRR516130 skin male and 5 month 7.62289e-05 SRR1035978 13 hpf rx3-/- 7.61303e-05 SRR1647679 head kidney normal 7.61118e-05 SRR1035981 13 hpf rx3+/+ or rx3+/- 7.56543e-05 SRR658539 bud Gata5/6 morphant 7.45212e-05 SRR1647681 head kidney SVCV treatment 7.43766e-05 SRR1647683 spleen SVCV treatment 7.37344e-05 SRR1562529 intestine and pancreas normal 7.36139e-05 SRR535986 larvae nhsl1b mut 7.23906e-05 SRR527832 16-36 hpf normal 7.02305e-05 SRR1299124 caudal fin Zero day time after treatment 6.85014e-05 SRR1647680 head kidney SVCV treatment 6.64204e-05 SRR038625 embryo traf6 morpholino 6.44987e-05 SRR527833 5 dpf normal 6.36912e-05 SRR516132 skin male and 5 month 6.31144e-05 SRR1028003 head normal 6.22591e-05 SRR065197 3 dpf U1C knockout 6.193810000000001e-05 SRR065196 3 dpf normal 6.08145e-05 SRR514028 retina control morpholino 5.99409e-05 SRR527844 24hpf normal 5.6984099999999995e-05 SRR748491 germ ring normal 5.68912e-05 SRR957180 heart 7 days after heart tip amputation 5.65903e-05 SRR1004788 larvae impdh1b morpholino 5.6476000000000006e-05 SRR1562530 liver normal 5.6338699999999996e-05 SRR1004786 larvae control morpholino 5.60354e-05 SRR658535 bud Gata5 morphant 5.45295e-05 SRR957181 heart normal 5.4479300000000005e-05 SRR658533 bud normal 5.3979e-05 SRR1647682 spleen normal 5.36759e-05 SRR1647684 spleen SVCV treatment 5.32543e-05 SRR658543 6 somite Gata5 morphan 5.30072e-05 SRR797908 embryo normal 5.2133000000000004e-05 SRR1035984 13 hpf normal 5.18701e-05 SRR1004787 larvae impdh1a morpholino 5.1706199999999996e-05 SRR658545 6 somite Gata6 morphant 5.12562e-05 SRR658537 bud Gata6 morphant 5.07032e-05 SRR748490 1 kcell normal 4.96549e-05 SRR1004789 larvae impdh2 morpholino 4.9246800000000004e-05 SRR797917 embryo pbx2/4-MO and prdm1-/- 4.73012e-05 SRR749514 24 hpf normal 4.72161e-05 SRR038626 embryo control morpholino and bacterial infection 4.64995e-05 SRR748489 egg normal 4.52647e-05 SRR749515 24 hpf eif3ha morphant 4.3318699999999996e-05 SRR797911 embryo prdm1-/- 4.19531e-05 SRR1565805 brain normal 3.69032e-05 SRR1565815 brain normal 3.68129e-05 SRR527834 head normal 3.15269e-05 SRR527835 tail normal 3.07448e-05 SRR1021213 sphere stage normal 1.44096e-05