sample tissue condition fpkm SRR797917 embryo pbx2/4-MO and prdm1-/- 92.4202 SRR797914 embryo pbx2/4-MO 91.9962 SRR797911 embryo prdm1-/- 90.1077 SRR797908 embryo normal 88.2807 SRR594771 endothelium normal 88.0569 SRR516125 skin male and 3.5 year 80.5923 SRR516131 skin male and 5 month 76.7784 SRR1569491 embryo normal 76.1893 SRR1569495 embryo normal 73.9862 SRR1299124 caudal fin Zero day time after treatment 71.4149 SRR527840 24hpf normal 70.056 SRR527836 24hpf normal 68.7865 SRR535943 larvae vangl mut 66.8909 SRR527844 24hpf normal 64.4156 SRR535890 larvae normal 60.2938 SRR535926 larvae normal 60.0517 SRR535913 larvae krox mut 59.7778 SRR749514 24 hpf normal 58.0126 SRR1004786 larvae control morpholino 55.8904 SRR749515 24 hpf eif3ha morphant 55.7597 SRR1035981 13 hpf rx3+/+ or rx3+/- 55.7462 SRR658541 6 somite normal 55.7309 SRR1035978 13 hpf rx3-/- 55.2237 SRR1708345 embryo SIBAS 55.0464 SRR658543 6 somite Gata5 morphan 54.4863 SRR594769 blood normal 52.7707 SRR658547 6 somite Gata5/6 morphant 51.0221 SRR658545 6 somite Gata6 morphant 50.5578 SRR1708343 embryo MUTAS 49.0064 SRR1004788 larvae impdh1b morpholino 47.8344 ERR023144 brain normal 47.7576 SRR516133 skin male and 5 month 45.6254 SRR1004785 larvae normal 45.6029 SRR891510 muscle normal 42.5585 SRR1708346 embryo SIBPS 38.0664 SRR1035984 13 hpf normal 36.6954 SRR700537 heart Gata4 morpholino 35.9338 SRR941749 anterior pectoral fin normal 33.9558 SRR527832 16-36 hpf normal 32.6692 ERR023143 swim bladder normal 32.3005 SRR776510 embryo Salmonella infected and miR-146 knockdown 32.0996 SRR1708344 embryo MUTPS 31.9654 SRR516121 skin male and 3.5 year 30.2333 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 30.2015 SRR776508 embryo miR-146 knockdown 28.4588 SRR1004789 larvae impdh2 morpholino 27.4202 SRR1004787 larvae impdh1a morpholino 27.3611 SRR700534 heart control morpholino 27.3608 SRR527834 head normal 26.2054 SRR776507 embryo normal 25.8289 SRR891511 brain normal 24.8605 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 23.5638 SRR516134 skin male and 5 month 22.4909 SRR038624 embryo traf6 morpholino and bacterial infection 21.8098 SRR776509 embryo Salmonella infected 21.7914 SRR1565811 brain normal 21.6058 SRR038627 embryo control morpholino 20.854 ERR023145 heart normal 20.6296 SRR1565819 brain normal 20.6267 SRR038625 embryo traf6 morpholino 20.4275 SRR1565817 brain normal 19.6443 SRR516122 skin male and 3.5 year 19.605999999999998 SRR535978 larvae normal 19.4217 SRR1565809 brain normal 19.3907 SRR516123 skin male and 3.5 year 19.1233 SRR941753 posterior pectoral fin normal 19.0636 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 19.0516 SRR516124 skin male and 3.5 year 18.5577 SRR1565813 brain normal 18.4049 SRR516128 skin male and 5 month 18.3832 SRR1565807 brain normal 17.7438 SRR1565805 brain normal 17.3888 SRR1565815 brain normal 17.2699 SRR038626 embryo control morpholino and bacterial infection 16.3796 ERR023146 head kidney normal 16.0516 SRR514030 retina id2a morpholino 16.014 SRR1104059 heart kctd10 mut 15.8301 SRR535986 larvae nhsl1b mut 15.8161 ERR594417 retina normal 15.3004 SRR1562531 muscle normal 15.0305 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 14.9783 SRR516127 skin male and 5 month 13.969000000000001 SRR516126 skin male and 5 month 13.3764 SRR516129 skin male and 5 month 12.7982 SRR658537 bud Gata6 morphant 12.4901 SRR1104058 heart normal 12.4626 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 11.8134 SRR1291417 5 dpi injected marinum 11.2208 SRR942769 embryo myd88+/+ 10.6295 SRR1167753 embryo bacterial infection 10.4749 SRR630464 5 dpf injected epidermidis 10.2135 ERR594416 retina transgenic flk1 10.2033 SRR1562530 liver normal 10.0494 SRR630463 5 dpf normal 9.942919999999999 SRR516132 skin male and 5 month 9.8981 SRR516130 skin male and 5 month 9.858830000000001 SRR519717 2 dpf FETOH treatment 9.73407 SRR1167763 embryo ptpn6 morpholino and bacterial infection 9.69278 SRR800045 muscle normal 9.46589 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 9.38292 SRR592703 pineal gland normal 9.285860000000001 SRR1167752 embryo normal 9.26155 SRR516135 skin male and 5 month 9.05742 SRR519737 2 dpf VD3 treatment 8.99714 SRR1299128 caudal fin Three days time after treatment 8.83258 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 8.81852 SRR891504 liver normal 8.80545 SRR1523214 embryo glut12 morpholino 8.75923 SRR1291414 5 dpi normal 8.69184 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 8.416269999999999 SRR1188160 embryo Insulin 4 hpi 8.411480000000001 SRR1562532 spleen normal 8.35145 ERR594418 retina transgenic flk1 and develop tumors 8.32442 SRR1562529 intestine and pancreas normal 8.26298 SRR831692 embryo normal 8.25002 SRR942764 embryo myd88-/- 8.18779 SRR1523211 embryo control morpholino 8.18344 SRR514028 retina control morpholino 8.05139 SRR1647679 head kidney normal 8.03697 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 8.027560000000001 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 8.022689999999999 SRR1167756 embryo mpeg1 morpholino 7.92157 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 7.9158 SRR1167762 embryo ptpn6 morpholino 7.8787199999999995 SRR1205154 5dpf transgenic sqET20 7.811560000000001 SRR801556 embryo RPS19 and p53 morpholino 7.752339999999999 SRR1342217 embryo infection with Mycobacterium marinum 7.69959 SRR1342218 embryo marco morpholino 7.62082 SRR1188148 embryo Control PBS 0.5 hpi 7.60505 SRR610742 3 dpf express NICD 7.552739999999999 SRR1188156 embryo Control PBS 4 hpi 7.48223 SRR1188152 embryo Insulin 0.5 hpi 7.379630000000001 SRR592698 pineal gland normal 7.206580000000001 SRR1005529 embryo control morpholino 7.09019 SRR1167757 embryo mpeg1 morpholino and bacterial infection 7.0842600000000004 SRR801554 embryo control morpholino 7.079280000000001 SRR527833 5 dpf normal 7.064889999999999 SRR065196 3 dpf normal 6.968319999999999 SRR1534351 larvae 500 ug/l BDE47 treatment 6.8537300000000005 SRR592699 pineal gland normal 6.844989999999999 SRR1342216 embryo norml 6.8274300000000006 SRR592702 pineal gland normal 6.7273 SRR527835 tail normal 6.7074 SRR519752 7 dpf VD3 treatment 6.65285 SRR1299127 caudal fin Two days time after treatment 6.43534 SRR519747 6 dpf VD3 treatment 6.0633 SRR1028002 head normal 5.90039 SRR1028004 head normal 5.86559 SRR1562528 eye normal 5.80071 SRR519722 4 dpf FETOH treatment 5.75856 SRR658535 bud Gata5 morphant 5.75301 SRR535848 larvae hoxb1b mut 5.7249 SRR1048061 pineal gland dark 5.707380000000001 SRR535852 larvae hoxb1b mut 5.63817 SRR610740 3 dpf normal 5.5477300000000005 SRR610741 3 dpf express Ras 5.52719 SRR592700 pineal gland normal 5.52494 SRR065197 3 dpf U1C knockout 5.428780000000001 SRR1647682 spleen normal 5.35083 SRR519727 6 dpf FETOH treatment 5.33838 SRR519732 7 dpf FETOH treatment 5.26797 SRR519742 4 dpf VD3 treatment 5.25665 SRR535850 larvae hoxb1b mut 5.18869 SRR801555 embryo RPS19 morpholino 5.06186 SRR1647680 head kidney SVCV treatment 4.9853 SRR592701 pineal gland normal 4.84998 SRR726540 5 dpf normal 4.843030000000001 SRR535849 larvae normal 4.80043 SRR1048059 pineal gland light 4.7634 SRR535847 larvae normal 4.655869999999999 SRR1534349 larvae DMSO vehicle 4.62879 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 4.57335 SRR1534350 larvae 5 ug/l BDE47 treatment 4.56009 SRR1647681 head kidney SVCV treatment 4.53736 SRR535851 larvae normal 4.4600599999999995 SRR1005530 embryo RPL11 morpholino 4.29281 SRR658539 bud Gata5/6 morphant 4.27957 SRR658533 bud normal 4.2378 SRR726541 5 dpf infection with Mycobacterium marinum 3.91661 SRR633544 larvae exposed to cold stress 3.87439 SRR1299126 caudal fin One day time after treatment 3.84679 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 3.8170800000000003 SRR633550 larvae exposed to hypoxia stress 3.77305 SRR633516 larvae normal 3.6482 SRR1647683 spleen SVCV treatment 3.60974 SRR891495 heart normal 3.57444 SRR1039573 gastrointestinal diet 0.75 NPM 3.42841 SRR726542 5 dpf infection with control 3.3789599999999997 SRR1562533 testis normal 3.07622 SRR1299129 caudal fin Seven days time after treatment 2.97333 SRR1028003 head normal 2.85583 SRR1299125 caudal fin Half day time after treatment 2.47211 SRR1647684 spleen SVCV treatment 2.42798 SRR1039571 gastrointestinal diet 0.1 NPM 2.42257 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 1.68272 SRR748488 sperm normal 1.6337700000000002 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.62036 SRR1205160 5dpf transgenic sqET20 and GFP+ 1.48038 SRR891512 blood normal 0.705796 SRR1035239 liver transgenic mCherry control 0.550946 SRR748489 egg normal 0.332394 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.309309 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.301859 SRR1035237 liver transgenic UHRF1 0.279042 SRR1021215 sphere stage Mzeomesa 0.198179 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.15974000000000002 SRR800037 egg normal 0.11873399999999999 SRR1021213 sphere stage normal 0.103585 SRR748490 1 kcell normal 0.0789393 SRR800046 sphere stage 5azaCyD treatment 0.07558619999999999 SRR800043 sphere stage normal 0.06738569999999999 SRR800049 sphere stage control treatment 0.05971130000000001 SRR748491 germ ring normal 0.0280786 SRR1648854 brain normal 0.0194712 SRR957180 heart 7 days after heart tip amputation 0.0100615 SRR372798 28 hpf normal 0.00790373 SRR1648855 brain normal 0.00488565